FFCP PHASE1:Mm9::chr9:46038153..46038162,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=128|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46038153..46038162,-|id=chr9:46038153..46038162,-|ontology_enrichment_celltype=CL:0000181!1.20e-09!5;CL:0000417!1.20e-09!5;CL:0000668!1.20e-09!5;CL:0000412!1.20e-09!5;CL:0000182!1.20e-09!5|ontology_enrichment_celltype_v019_2=CL:0000182,6.36e-47,5;CL:0000223,2.94e-12,20;CL:0000066,6.44e-10,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.23e-15!22;UBERON:0007499!1.23e-15!22;UBERON:0006925!1.23e-15!22;UBERON:0009497!1.23e-15!22;UBERON:0000015!1.23e-15!22;UBERON:0002423!1.23e-15!22;UBERON:0006235!1.23e-15!22;UBERON:0008835!1.23e-15!22;UBERON:0003894!1.23e-15!22;UBERON:0004161!1.23e-15!22;UBERON:0008836!1.23e-15!22;UBERON:0009854!7.72e-15!23;UBERON:0009856!7.72e-15!23;UBERON:0002365!1.95e-13!25;UBERON:0002330!1.95e-13!25;UBERON:0005256!5.74e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80|phase1_expression=0,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83962733820076,1.07940638327563,20.7928453583254,11.6486990645307,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,1.09824565275233,0,1.11642284300551,0.624075346229121,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr9:46038153..46038162,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:46038153..46038162,- | |||
|description=CAGE_peak_at_chr9:46038153..46038162,- | |||
|id=chr9:46038153..46038162,- | |||
|ontology_enrichment_celltype=CL:0000181!1.20e-09!5;CL:0000417!1.20e-09!5;CL:0000668!1.20e-09!5;CL:0000412!1.20e-09!5;CL:0000182!1.20e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.36e-47,5;CL:0000223,2.94e-12,20;CL:0000066,6.44e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.23e-15!22;UBERON:0007499!1.23e-15!22;UBERON:0006925!1.23e-15!22;UBERON:0009497!1.23e-15!22;UBERON:0000015!1.23e-15!22;UBERON:0002423!1.23e-15!22;UBERON:0006235!1.23e-15!22;UBERON:0008835!1.23e-15!22;UBERON:0003894!1.23e-15!22;UBERON:0004161!1.23e-15!22;UBERON:0008836!1.23e-15!22;UBERON:0009854!7.72e-15!23;UBERON:0009856!7.72e-15!23;UBERON:0002365!1.95e-13!25;UBERON:0002330!1.95e-13!25;UBERON:0005256!5.74e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83962733820076,1.07940638327563,20.7928453583254,11.6486990645307,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,1.09824565275233,0,1.11642284300551,0.624075346229121,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:46038153..46038162,- | |||
}} |
Latest revision as of 05:24, 5 August 2015
Short description: | p@chr9:46038153..46038162, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46038153..46038162, - |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.36e-47 | 5 |
endodermal cell | 2.94e-12 | 20 |
epithelial cell | 6.44e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |