FFCP PHASE1:Mm9::chr6:129182915..129182922,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |MCL_coexpression_id=7 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:129182915..129182922,- | |||
|description=CAGE_peak_at_chr6:129182915..129182922,- | |description=CAGE_peak_at_chr6:129182915..129182922,- | ||
|id=chr6:129182915..129182922,- | |id=chr6:129182915..129182922,- | ||
|ontology_enrichment_celltype=CL:0000624!2.02e-08!8;CL:0000893!2.03e-08!6;CL:0002489!2.03e-08!6;CL:0000898!2.03e-08!6;CL:0000809!2.03e-08!6;CL:0000810!2.03e-08!6;CL:0000895!2.03e-08!6;CL:0000808!2.03e-08!6;CL:0000894!2.03e-08!6;CL:0000806!2.03e-08!6;CL:0000807!2.03e-08!6;CL:0000805!2.03e-08!6;CL:0002425!2.03e-08!6;CL:0002436!2.03e-08!6;CL:0002427!2.03e-08!6;CL:0002428!2.03e-08!6;CL:0002429!2.03e-08!6;CL:0002433!2.03e-08!6;CL:0002431!2.03e-08!6;CL:0002432!2.03e-08!6;CL:0000791!2.24e-07!9;CL:0000789!2.24e-07!9;CL:0002420!2.24e-07!9;CL:0002419!2.24e-07!9;CL:0000790!2.24e-07!9;CL:0000838!4.89e-07!12;CL:0002031!5.04e-07!25;CL:0000988!6.51e-07!32;CL:0002032!6.51e-07!32;CL:0000037!6.51e-07!32;CL:0000566!6.51e-07!32;CL:0000837!6.51e-07!32 | |ontology_enrichment_celltype=CL:0000624!2.02e-08!8;CL:0000893!2.03e-08!6;CL:0002489!2.03e-08!6;CL:0000898!2.03e-08!6;CL:0000809!2.03e-08!6;CL:0000810!2.03e-08!6;CL:0000895!2.03e-08!6;CL:0000808!2.03e-08!6;CL:0000894!2.03e-08!6;CL:0000806!2.03e-08!6;CL:0000807!2.03e-08!6;CL:0000805!2.03e-08!6;CL:0002425!2.03e-08!6;CL:0002436!2.03e-08!6;CL:0002427!2.03e-08!6;CL:0002428!2.03e-08!6;CL:0002429!2.03e-08!6;CL:0002433!2.03e-08!6;CL:0002431!2.03e-08!6;CL:0002432!2.03e-08!6;CL:0000791!2.24e-07!9;CL:0000789!2.24e-07!9;CL:0002420!2.24e-07!9;CL:0002419!2.24e-07!9;CL:0000790!2.24e-07!9;CL:0000838!4.89e-07!12;CL:0002031!5.04e-07!25;CL:0000988!6.51e-07!32;CL:0002032!6.51e-07!32;CL:0000037!6.51e-07!32;CL:0000566!6.51e-07!32;CL:0000837!6.51e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.55e-13,1;CL:0002078,1.55e-13,1;CL:0000115,1.55e-13,1;CL:0002262,1.55e-13,1;CL:1000398,1.55e-13,1;CL:0000893,1.61e-09,6;CL:0002489,1.61e-09,6;CL:0000898,1.61e-09,6;CL:0000809,1.61e-09,6;CL:0000810,1.61e-09,6;CL:0000895,1.61e-09,6;CL:0000808,1.61e-09,6;CL:0000894,1.61e-09,6;CL:0000806,1.61e-09,6;CL:0000807,1.61e-09,6;CL:0000805,1.61e-09,6;CL:0002425,1.61e-09,6;CL:0002436,1.61e-09,6;CL:0002427,1.61e-09,6;CL:0002428,1.61e-09,6;CL:0002429,1.61e-09,6;CL:0002433,1.61e-09,6;CL:0002431,1.61e-09,6;CL:0002432,1.61e-09,6;CL:0000624,2.29e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.06e-10!48;UBERON:0002405!4.08e-08!70;UBERON:0002390!2.23e-07!45;UBERON:0003061!2.23e-07!45;UBERON:0003081!4.76e-07!88;UBERON:0002465!8.01e-07!3 | |ontology_enrichment_uberon=UBERON:0002193!3.06e-10!48;UBERON:0002405!4.08e-08!70;UBERON:0002390!2.23e-07!45;UBERON:0003061!2.23e-07!45;UBERON:0003081!4.76e-07!88;UBERON:0002465!8.01e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001153,6.50e-14,1;UBERON:0001045,6.50e-14,1;UBERON:0000029,8.69e-14,1;UBERON:0001097,8.69e-14,1;UBERON:0003968,8.69e-14,1;UBERON:0001467,8.69e-14,1;UBERON:0002394,1.55e-13,1;UBERON:0001281,1.55e-13,1;UBERON:0000353,1.55e-13,1;UBERON:0003497,1.55e-13,1;UBERON:0003909,1.55e-13,1;UBERON:0003928,1.55e-13,1;UBERON:0003835,1.55e-13,1;UBERON:0003513,1.55e-13,1;UBERON:0001280,1.55e-13,1;UBERON:0004647,1.55e-13,1;UBERON:0002294,1.55e-13,1;UBERON:0001173,1.55e-13,1;UBERON:0004912,1.55e-13,1;UBERON:0005171,1.55e-13,1;UBERON:0001155,1.32e-07,2;UBERON:0000059,1.32e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.258246646883153,4.646027831005,5.14941957908386,0.856089841127525,0.638177271962691,0,0.34968160967599,0,0.607425802169478,1.39912375625629,0.315462165358238,0.411343300817216,0,0,0,0,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,1.45653105909346,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.683483523191411,0,0,0,0,0.228778173206523,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0.258246646883153,4.646027831005,5.14941957908386,0.856089841127525,0.638177271962691,0,0.34968160967599,0,0.607425802169478,1.39912375625629,0.315462165358238,0.411343300817216,0,0,0,0,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,1.45653105909346,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.683483523191411,0,0,0,0,0.228778173206523,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr6:129182915..129182922,- | |short_description=p@chr6:129182915..129182922,- | ||
}} | }} |
Latest revision as of 06:08, 5 August 2015
Short description: | p@chr6:129182915..129182922, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129182915..129182922, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.55e-13 | 1 |
meso-epithelial cell | 1.55e-13 | 1 |
endothelial cell | 1.55e-13 | 1 |
endothelial cell of sinusoid | 1.55e-13 | 1 |
endothelial cell of hepatic sinusoid | 1.55e-13 | 1 |
thymocyte | 1.61e-09 | 6 |
double negative thymocyte | 1.61e-09 | 6 |
naive T cell | 1.61e-09 | 6 |
double-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.61e-09 | 6 |
DN4 thymocyte | 1.61e-09 | 6 |
DN1 thymic pro-T cell | 1.61e-09 | 6 |
DN2 thymocyte | 1.61e-09 | 6 |
DN3 thymocyte | 1.61e-09 | 6 |
immature single positive thymocyte | 1.61e-09 | 6 |
early T lineage precursor | 1.61e-09 | 6 |
mature CD4 single-positive thymocyte | 1.61e-09 | 6 |
resting double-positive thymocyte | 1.61e-09 | 6 |
double-positive blast | 1.61e-09 | 6 |
CD69-positive double-positive thymocyte | 1.61e-09 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.61e-09 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta T cell | 2.29e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
caecum | 6.50e-14 | 1 |
midgut | 6.50e-14 | 1 |
lymph node | 8.69e-14 | 1 |
axillary lymph node | 8.69e-14 | 1 |
peripheral lymph node | 8.69e-14 | 1 |
shoulder | 8.69e-14 | 1 |
bile duct | 1.55e-13 | 1 |
hepatic sinusoid | 1.55e-13 | 1 |
parenchyma | 1.55e-13 | 1 |
abdomen blood vessel | 1.55e-13 | 1 |
sinusoid | 1.55e-13 | 1 |
digestive system duct | 1.55e-13 | 1 |
abdominal segment blood vessel | 1.55e-13 | 1 |
trunk blood vessel | 1.55e-13 | 1 |
liver parenchyma | 1.55e-13 | 1 |
liver lobule | 1.55e-13 | 1 |
biliary system | 1.55e-13 | 1 |
biliary tree | 1.55e-13 | 1 |
biliary bud | 1.55e-13 | 1 |
hepatic duct | 1.55e-13 | 1 |
colon | 1.32e-07 | 2 |
large intestine | 1.32e-07 | 2 |