FFCP PHASE1:Mm9::chr12:8546366..8546420,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=328059|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=0bp_to_ENSMUST00000129465_5end|description=CAGE_peak_1_at_Slc7a15_5end|id=chr12:8546366..8546420,-|ontology_enrichment_celltype=CL:0002563!1.02e-11!9;CL:0002251!1.02e-11!9;CL:0000239!6.41e-09!6;CL:0000677!6.41e-09!6;CL:0000212!6.41e-09!6;CL:0000584!6.41e-09!6;CL:0000075!1.90e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-17,9;CL:0002251,1.06e-17,9;CL:0000239,3.56e-16,6;CL:0000677,3.56e-16,6;CL:0000584,3.56e-16,6;CL:0000075,9.32e-14,7;CL:0000066,1.09e-10,25;CL:0002076,4.58e-10,15;CL:0000682,1.05e-08,3;CL:0000223,3.29e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.03e-18!15;UBERON:0000160!5.25e-18!43;UBERON:0001242!1.66e-16!13;UBERON:0000060!1.66e-16!13;UBERON:0001262!1.66e-16!13;UBERON:0004786!1.66e-16!13;UBERON:0004923!1.06e-12!24;UBERON:0005409!1.75e-12!59;UBERON:0003350!1.02e-11!9;UBERON:0004808!1.02e-11!9;UBERON:0001277!1.02e-11!9;UBERON:0000485!4.05e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.77e-40,31;UBERON:0000344,1.62e-31,15;UBERON:0001242,3.99e-27,13;UBERON:0001262,3.99e-27,13;UBERON:0004786,3.99e-27,13;UBERON:0005409,1.34e-24,47;UBERON:0004923,3.14e-21,24;UBERON:0003350,1.06e-17,9;UBERON:0004808,1.06e-17,9;UBERON:0001277,1.06e-17,9;UBERON:0000485,3.13e-14,11;UBERON:0002108,5.25e-11,4;UBERON:0001007,1.79e-10,116;UBERON:0001555,1.79e-10,116;UBERON:0007026,1.79e-10,116;UBERON:0004119,3.40e-10,118;UBERON:0000925,3.40e-10,118;UBERON:0006595,3.40e-10,118;UBERON:0004921,9.48e-09,114;UBERON:0000331,1.89e-08,3;UBERON:0002116,1.89e-08,3;UBERON:0001204,1.89e-08,3;UBERON:0001168,1.89e-08,3|phase1_expression=0,179.024384118992,155.609739871221,322.729313464388,324.580433005233,4.19698179779725,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,6.39969691173627,11.9292826154928,125.182568177074,56.8605834929979,47.4036711908956,45.9856675084425,88.2105454159758,25.7207392360153,0,0,0,0.577703239502549,3.32469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,16.7850303187018,0,0,0,0,0,0,0.352766121407114,0.125666591329675,2.47194967734374,0,0,0,0,0,0,0,0,111.123819015737,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.828350759487,98.9045119321656,0,0,0,0.201683524623343,0.22237804384487,1.14135375667535,105.819980724426,25.1989400727737,1.75934646160189,1.98956472041151,0.58489226135736,115.947703716395,87.3197721493765,101.960331906236,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.608580364165509,0,0.25462585178142,1.15078454980324,2.43202840162553,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,7.75284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,141.368205765478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0,0,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,1.05227884575137,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,1.63692417267876,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p1@Slc7a15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328059 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000129465_5end | |||
|cluster_id=chr12:8546366..8546420,- | |||
|description=CAGE_peak_1_at_Slc7a15_5end | |||
|id=chr12:8546366..8546420,- | |||
|ontology_enrichment_celltype=CL:0002563!1.02e-11!9;CL:0002251!1.02e-11!9;CL:0000239!6.41e-09!6;CL:0000677!6.41e-09!6;CL:0000212!6.41e-09!6;CL:0000584!6.41e-09!6;CL:0000075!1.90e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-17,9;CL:0002251,1.06e-17,9;CL:0000239,3.56e-16,6;CL:0000677,3.56e-16,6;CL:0000584,3.56e-16,6;CL:0000075,9.32e-14,7;CL:0000066,1.09e-10,25;CL:0002076,4.58e-10,15;CL:0000682,1.05e-08,3;CL:0000223,3.29e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.03e-18!15;UBERON:0000160!5.25e-18!43;UBERON:0001242!1.66e-16!13;UBERON:0000060!1.66e-16!13;UBERON:0001262!1.66e-16!13;UBERON:0004786!1.66e-16!13;UBERON:0004923!1.06e-12!24;UBERON:0005409!1.75e-12!59;UBERON:0003350!1.02e-11!9;UBERON:0004808!1.02e-11!9;UBERON:0001277!1.02e-11!9;UBERON:0000485!4.05e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.77e-40,31;UBERON:0000344,1.62e-31,15;UBERON:0001242,3.99e-27,13;UBERON:0001262,3.99e-27,13;UBERON:0004786,3.99e-27,13;UBERON:0005409,1.34e-24,47;UBERON:0004923,3.14e-21,24;UBERON:0003350,1.06e-17,9;UBERON:0004808,1.06e-17,9;UBERON:0001277,1.06e-17,9;UBERON:0000485,3.13e-14,11;UBERON:0002108,5.25e-11,4;UBERON:0001007,1.79e-10,116;UBERON:0001555,1.79e-10,116;UBERON:0007026,1.79e-10,116;UBERON:0004119,3.40e-10,118;UBERON:0000925,3.40e-10,118;UBERON:0006595,3.40e-10,118;UBERON:0004921,9.48e-09,114;UBERON:0000331,1.89e-08,3;UBERON:0002116,1.89e-08,3;UBERON:0001204,1.89e-08,3;UBERON:0001168,1.89e-08,3 | |||
|phase1_expression=0,179.024384118992,155.609739871221,322.729313464388,324.580433005233,4.19698179779725,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,6.39969691173627,11.9292826154928,125.182568177074,56.8605834929979,47.4036711908956,45.9856675084425,88.2105454159758,25.7207392360153,0,0,0,0.577703239502549,3.32469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,16.7850303187018,0,0,0,0,0,0,0.352766121407114,0.125666591329675,2.47194967734374,0,0,0,0,0,0,0,0,111.123819015737,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.828350759487,98.9045119321656,0,0,0,0.201683524623343,0.22237804384487,1.14135375667535,105.819980724426,25.1989400727737,1.75934646160189,1.98956472041151,0.58489226135736,115.947703716395,87.3197721493765,101.960331906236,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.608580364165509,0,0.25462585178142,1.15078454980324,2.43202840162553,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,7.75284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,141.368205765478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0,0,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,1.05227884575137,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,1.63692417267876,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p1@Slc7a15 | |||
}} |
Revision as of 09:19, 5 August 2015
Short description: | p1@Slc7a15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc7a15_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000129465_5end |
EntrezGene: | 328059 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.06e-17 | 9 |
epithelial cell of alimentary canal | 1.06e-17 | 9 |
brush border epithelial cell | 3.56e-16 | 6 |
gut absorptive cell | 3.56e-16 | 6 |
enterocyte | 3.56e-16 | 6 |
columnar/cuboidal epithelial cell | 9.32e-14 | 7 |
epithelial cell | 1.09e-10 | 25 |
endo-epithelial cell | 4.58e-10 | 15 |
M cell of gut | 1.05e-08 | 3 |
endodermal cell | 3.29e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.77e-40 | 31 |
mucosa | 1.62e-31 | 15 |
intestinal mucosa | 3.99e-27 | 13 |
wall of intestine | 3.99e-27 | 13 |
gastrointestinal system mucosa | 3.99e-27 | 13 |
gastrointestinal system | 1.34e-24 | 47 |
organ component layer | 3.14e-21 | 24 |
epithelium of mucosa | 1.06e-17 | 9 |
gastrointestinal system epithelium | 1.06e-17 | 9 |
intestinal epithelium | 1.06e-17 | 9 |
simple columnar epithelium | 3.13e-14 | 11 |
small intestine | 5.25e-11 | 4 |
digestive system | 1.79e-10 | 116 |
digestive tract | 1.79e-10 | 116 |
primitive gut | 1.79e-10 | 116 |
endoderm-derived structure | 3.40e-10 | 118 |
endoderm | 3.40e-10 | 118 |
presumptive endoderm | 3.40e-10 | 118 |
subdivision of digestive tract | 9.48e-09 | 114 |
ileal mucosa | 1.89e-08 | 3 |
ileum | 1.89e-08 | 3 |
mucosa of small intestine | 1.89e-08 | 3 |
wall of small intestine | 1.89e-08 | 3 |