Personal tools

FFCP PHASE1:Mm9::chr2:72228798..72228812,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:72228798..72228812,+
|DHSsupport=NA
|short_description=p@chr2:72228798..72228812,+
|DPIdataset=NA
|description=CAGE_peak_at_chr2:72228798..72228812,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=35
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr2:72228798..72228812,+
|description=CAGE_peak_at_chr2:72228798..72228812,+
|id=chr2:72228798..72228812,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005418!1.10e-07!5;UBERON:0002472!1.10e-07!5;UBERON:0008784!1.10e-07!5;UBERON:0006058!1.10e-07!5;UBERON:0004709!1.10e-07!5;UBERON:0005420!1.10e-07!5;UBERON:0006057!1.10e-07!5;UBERON:0000978!1.10e-07!5;UBERON:0002103!1.10e-07!5;UBERON:0000376!1.10e-07!5;UBERON:0000154!1.10e-07!5;UBERON:0005730!1.10e-07!5
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.22e-26,5;UBERON:0002472,3.22e-26,5;UBERON:0008784,3.22e-26,5;UBERON:0006058,3.22e-26,5;UBERON:0004709,3.22e-26,5;UBERON:0002529,3.22e-26,5;UBERON:0010538,3.22e-26,5;UBERON:0005420,3.22e-26,5;UBERON:0010758,3.22e-26,5;UBERON:0000978,3.22e-26,5;UBERON:0002103,3.22e-26,5;UBERON:0000376,3.22e-26,5;UBERON:0000154,3.22e-26,5;UBERON:0010709,3.22e-26,5;UBERON:0005730,3.22e-26,5;UBERON:0000981,6.58e-21,4;UBERON:0003608,6.58e-21,4;UBERON:0003826,6.58e-21,4;UBERON:0008202,6.58e-21,4;UBERON:0004381,6.58e-21,4;UBERON:0007273,6.58e-21,4;UBERON:0010912,6.58e-21,4;UBERON:0002513,6.58e-21,4;UBERON:0004375,6.58e-21,4;UBERON:0010740,6.58e-21,4;UBERON:0010363,6.58e-21,4;UBERON:0003860,6.58e-21,4;UBERON:0002428,6.58e-21,4;UBERON:0010742,6.58e-21,4;UBERON:0002495,6.58e-21,4;UBERON:0003464,6.58e-21,4;UBERON:0003606,6.58e-21,4;UBERON:0005893,6.58e-21,4;UBERON:0009749,6.58e-21,4;UBERON:0010712,6.58e-21,4;UBERON:0010886,6.58e-21,4;UBERON:0005254,6.58e-21,4;UBERON:0010885,6.58e-21,4;UBERON:0010881,6.58e-21,4;UBERON:0010882,6.58e-21,4;UBERON:0007844,6.58e-21,4;UBERON:0001441,6.58e-21,4;UBERON:0011249,6.58e-21,4;UBERON:0002091,6.58e-21,4;UBERON:0003285,6.58e-21,4;UBERON:0004288,6.58e-21,4;UBERON:0010129,6.58e-21,4;UBERON:0006234,6.58e-21,4;UBERON:0000075,4.91e-14,6;UBERON:0005856,4.91e-14,6;UBERON:0005866,4.91e-14,6;UBERON:0005863,4.91e-14,6;UBERON:0000026,6.80e-11,12;UBERON:0004708,6.80e-11,12;UBERON:0002101,6.80e-11,12;UBERON:0004357,6.80e-11,12;UBERON:0004347,6.80e-11,12;UBERON:0005732,6.80e-11,12;UBERON:0005733,6.80e-11,12;UBERON:0010707,4.78e-10,13;UBERON:0003102,2.55e-08,22;UBERON:0007100,2.23e-07,18;UBERON:0000948,2.23e-07,18;UBERON:0005498,2.23e-07,18;UBERON:0004140,2.23e-07,18;UBERON:0009881,2.23e-07,18;UBERON:0004141,2.23e-07,18;UBERON:0003084,2.23e-07,18;UBERON:0007005,2.23e-07,18;UBERON:0004139,2.23e-07,18;UBERON:0004291,2.23e-07,18;UBERON:0001374,5.73e-07,1;UBERON:0004252,5.73e-07,1;UBERON:0003663,5.73e-07,1;UBERON:0005090,5.73e-07,1;UBERON:0001630,5.73e-07,1;UBERON:0003661,5.73e-07,1;UBERON:0010890,5.73e-07,1;UBERON:0001383,5.73e-07,1;UBERON:0001723,6.50e-07,1;UBERON:0001033,6.50e-07,1;UBERON:0010056,6.50e-07,1
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,1.61766849947409,2.42925670306433,4.84875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0.631325567659422,0,0,0,0,0,0,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.583826711835847,0.987359099480883,2.62667942526552,3.64809642956351,4.67839959761063,3.95190207523891,5.77087600669599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.322928853391811,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,2.01621004380506,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,9.52267611183888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0,0.282328141245992,0.423073039458382,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,3.06061331310149,1.54413993383661,3.01428186306548
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,1.61766849947409,2.42925670306433,4.84875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0.631325567659422,0,0,0,0,0,0,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.583826711835847,0.987359099480883,2.62667942526552,3.64809642956351,4.67839959761063,3.95190207523891,5.77087600669599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.322928853391811,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,2.01621004380506,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,9.52267611183888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0,0.282328141245992,0.423073039458382,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,3.06061331310149,1.54413993383661,3.01428186306548
|short_description=p@chr2:72228798..72228812,+
}}
}}

Latest revision as of 10:28, 5 August 2015

Short description:p@chr2:72228798..72228812, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:72228798..72228812, +
Coexpression cluster:MCL_coexpression_mm9:35
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:72228798..72228812,%2B&oldid=3889505"