FFCP PHASE1:Mm9::chr17:88050162..88050167,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:88050162..88050167,+ | |||
|description=CAGE_peak_at_chr17:88050162..88050167,+ | |description=CAGE_peak_at_chr17:88050162..88050167,+ | ||
|id=chr17:88050162..88050167,+ | |id=chr17:88050162..88050167,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.32e-07!9;CL:0002251!3.32e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.32e-07!9;CL:0002251!3.32e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.61e-12,25;CL:0002076,7.25e-11,15;CL:0002563,8.93e-11,9;CL:0002251,8.93e-11,9;CL:0000223,1.77e-08,20;CL:0000075,3.33e-08,7;CL:0000239,1.29e-07,6;CL:0000677,1.29e-07,6;CL:0000584,1.29e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.01e-24!43;UBERON:0005409!8.56e-24!59;UBERON:0004119!2.90e-14!130;UBERON:0000925!2.90e-14!130;UBERON:0006595!2.90e-14!130;UBERON:0001007!8.49e-14!128;UBERON:0001555!8.49e-14!128;UBERON:0007026!8.49e-14!128;UBERON:0004921!1.12e-12!126;UBERON:0004185!1.12e-12!126;UBERON:0000344!1.31e-11!15;UBERON:0001242!3.92e-10!13;UBERON:0000060!3.92e-10!13;UBERON:0001262!3.92e-10!13;UBERON:0004786!3.92e-10!13;UBERON:0000485!7.19e-08!11;UBERON:0004923!1.32e-07!24;UBERON:0002108!2.74e-07!16;UBERON:0003350!3.32e-07!9;UBERON:0004808!3.32e-07!9;UBERON:0001277!3.32e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!2.01e-24!43;UBERON:0005409!8.56e-24!59;UBERON:0004119!2.90e-14!130;UBERON:0000925!2.90e-14!130;UBERON:0006595!2.90e-14!130;UBERON:0001007!8.49e-14!128;UBERON:0001555!8.49e-14!128;UBERON:0007026!8.49e-14!128;UBERON:0004921!1.12e-12!126;UBERON:0004185!1.12e-12!126;UBERON:0000344!1.31e-11!15;UBERON:0001242!3.92e-10!13;UBERON:0000060!3.92e-10!13;UBERON:0001262!3.92e-10!13;UBERON:0004786!3.92e-10!13;UBERON:0000485!7.19e-08!11;UBERON:0004923!1.32e-07!24;UBERON:0002108!2.74e-07!16;UBERON:0003350!3.32e-07!9;UBERON:0004808!3.32e-07!9;UBERON:0001277!3.32e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-30,31;UBERON:0005409,4.26e-27,47;UBERON:0000344,5.98e-18,15;UBERON:0001242,1.53e-15,13;UBERON:0001262,1.53e-15,13;UBERON:0004786,1.53e-15,13;UBERON:0000485,7.42e-12,11;UBERON:0001007,1.43e-11,116;UBERON:0001555,1.43e-11,116;UBERON:0007026,1.43e-11,116;UBERON:0004119,3.81e-11,118;UBERON:0000925,3.81e-11,118;UBERON:0006595,3.81e-11,118;UBERON:0003350,8.93e-11,9;UBERON:0004808,8.93e-11,9;UBERON:0001277,8.93e-11,9;UBERON:0004923,9.21e-11,24;UBERON:0004921,3.12e-10,114;UBERON:0000007,1.64e-07,8;UBERON:0003296,1.64e-07,8;UBERON:0010133,1.64e-07,8 | |||
|phase1_expression=1.28119077683835,3.14077866875425,5.0049916332849,12.0985684522732,13.5241847085514,2.85394762250213,5.13947809310157,0,0.422366166455,0.234064526321993,0.34243593645101,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,8.79958325363737,13.9939661450974,3.44539178469012,4.30761996159075,3.23206849028834,19.3823887845501,9.07308467135751,8.20402889424627,0,0,0,5.77703239502549,7.31432439577366,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,14.5048997477513,10.8944742154292,17.1878311305026,2.05530983494308,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0.484875253135222,9.31958806090611,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.870848794270651,4.0435641349388,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,12.5559137533843,3.17340679996253,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,4.44756087689741,5.70676878337677,11.3886974770683,9.22314146454461,12.5667604400135,12.1363447945102,9.55324026883689,4.49409704327111,17.2910439899755,15.1347367673319,0.569003702859245,0.342745537829186,0,1.01825663922657,0.775809948670503,0.280543279561274,0.569128834118316,1.18088118383682,0.784993639206874,1.35736880313981,0,0,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,1.01847051465113,0.469380496577004,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,2.45882136509518,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.494910368917606,0,1.94224508923985,2.41858845571801,3.01768127609437,0.295301892880773,1.53717573971964,3.10113951801865,1.81766864738753,1.78248689192361,0.632073515871632,1.05418608574999,2.06271086496374,5.44703369206061,1.8006109403131,2.58717367565509,1.50035924522115,1.06404140185364,3.21063871683727,2.63278432963394,3.04464949114599,0.704015124191131,0.42366414172764,1.32317038832977,0.98931751764888,0.322928853391811,0.180938774784468,1.19372344003136,0.820704498725306,13.4081184849731,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,3.81868247206045,0.158167996790568,0.813277868507395,2.91614420218863,2.09088296014469,2.62035076495413,1.07891477107857,0.661227645802687,1.30877970992015,7.12882353104861,1.86401793926078,2.25477175473676,0.149516546043979,0.827292452285488,0,0.129159823477731,0,0,0.2604087696879,0.314578033277133,0,0.288030006257865,0,2.02725215290164,1.1298205288131,0.77952493786677,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0.503653849092235,0.386379188064381,0.750729901804728,1.46521299413812,0.857473516316263,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0,0.655490552289177,0.768301828858431,0.574354689556133,0,0.231768651889711,0,0.824171801606613,0.588795680537589,1.37147700954166,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.592302255241736,0.182927972872773,0,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=1.28119077683835,3.14077866875425,5.0049916332849,12.0985684522732,13.5241847085514,2.85394762250213,5.13947809310157,0,0.422366166455,0.234064526321993,0.34243593645101,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,8.79958325363737,13.9939661450974,3.44539178469012,4.30761996159075,3.23206849028834,19.3823887845501,9.07308467135751,8.20402889424627,0,0,0,5.77703239502549,7.31432439577366,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,14.5048997477513,10.8944742154292,17.1878311305026,2.05530983494308,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0.484875253135222,9.31958806090611,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.870848794270651,4.0435641349388,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,12.5559137533843,3.17340679996253,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,4.44756087689741,5.70676878337677,11.3886974770683,9.22314146454461,12.5667604400135,12.1363447945102,9.55324026883689,4.49409704327111,17.2910439899755,15.1347367673319,0.569003702859245,0.342745537829186,0,1.01825663922657,0.775809948670503,0.280543279561274,0.569128834118316,1.18088118383682,0.784993639206874,1.35736880313981,0,0,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,1.01847051465113,0.469380496577004,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,2.45882136509518,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.494910368917606,0,1.94224508923985,2.41858845571801,3.01768127609437,0.295301892880773,1.53717573971964,3.10113951801865,1.81766864738753,1.78248689192361,0.632073515871632,1.05418608574999,2.06271086496374,5.44703369206061,1.8006109403131,2.58717367565509,1.50035924522115,1.06404140185364,3.21063871683727,2.63278432963394,3.04464949114599,0.704015124191131,0.42366414172764,1.32317038832977,0.98931751764888,0.322928853391811,0.180938774784468,1.19372344003136,0.820704498725306,13.4081184849731,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,3.81868247206045,0.158167996790568,0.813277868507395,2.91614420218863,2.09088296014469,2.62035076495413,1.07891477107857,0.661227645802687,1.30877970992015,7.12882353104861,1.86401793926078,2.25477175473676,0.149516546043979,0.827292452285488,0,0.129159823477731,0,0,0.2604087696879,0.314578033277133,0,0.288030006257865,0,2.02725215290164,1.1298205288131,0.77952493786677,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0.503653849092235,0.386379188064381,0.750729901804728,1.46521299413812,0.857473516316263,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0,0.655490552289177,0.768301828858431,0.574354689556133,0,0.231768651889711,0,0.824171801606613,0.588795680537589,1.37147700954166,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.592302255241736,0.182927972872773,0,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr17:88050162..88050167,+ | |short_description=p@chr17:88050162..88050167,+ | ||
}} | }} |
Latest revision as of 11:36, 5 August 2015
Short description: | p@chr17:88050162..88050167, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88050162..88050167, + |
Coexpression cluster: | MCL_coexpression_mm9:3125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.61e-12 | 25 |
endo-epithelial cell | 7.25e-11 | 15 |
intestinal epithelial cell | 8.93e-11 | 9 |
epithelial cell of alimentary canal | 8.93e-11 | 9 |
endodermal cell | 1.77e-08 | 20 |
columnar/cuboidal epithelial cell | 3.33e-08 | 7 |
brush border epithelial cell | 1.29e-07 | 6 |
gut absorptive cell | 1.29e-07 | 6 |
enterocyte | 1.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.75e-30 | 31 |
gastrointestinal system | 4.26e-27 | 47 |
mucosa | 5.98e-18 | 15 |
intestinal mucosa | 1.53e-15 | 13 |
wall of intestine | 1.53e-15 | 13 |
gastrointestinal system mucosa | 1.53e-15 | 13 |
simple columnar epithelium | 7.42e-12 | 11 |
digestive system | 1.43e-11 | 116 |
digestive tract | 1.43e-11 | 116 |
primitive gut | 1.43e-11 | 116 |
endoderm-derived structure | 3.81e-11 | 118 |
endoderm | 3.81e-11 | 118 |
presumptive endoderm | 3.81e-11 | 118 |
epithelium of mucosa | 8.93e-11 | 9 |
gastrointestinal system epithelium | 8.93e-11 | 9 |
intestinal epithelium | 8.93e-11 | 9 |
organ component layer | 9.21e-11 | 24 |
subdivision of digestive tract | 3.12e-10 | 114 |
pituitary gland | 1.64e-07 | 8 |
gland of diencephalon | 1.64e-07 | 8 |
neuroendocrine gland | 1.64e-07 | 8 |