FFCP PHASE1:Mm9::chr11:116556116..116556196,-: Difference between revisions
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{{FFCP|EntrezGene=20446|HGNC=|UniProt=P70277|association_with_transcript=0bp_to_ENSMUST00000079545_5end|description=CAGE_peak_3_at_St6galnac2_5end|id=chr11:116556116..116556196,-|ontology_enrichment_celltype=CL:0002563!4.93e-07!9;CL:0002251!4.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.49e-08,9;CL:0002251,2.49e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.19e-18!43;UBERON:0005409!6.53e-18!59;UBERON:0000344!6.36e-10!15;UBERON:0001242!7.81e-09!13;UBERON:0000060!7.81e-09!13;UBERON:0001262!7.81e-09!13;UBERON:0004786!7.81e-09!13;UBERON:0004119!3.71e-08!130;UBERON:0000925!3.71e-08!130;UBERON:0006595!3.71e-08!130;UBERON:0005153!4.76e-08!17;UBERON:0000464!6.71e-08!57;UBERON:0001007!1.14e-07!128;UBERON:0001555!1.14e-07!128;UBERON:0007026!1.14e-07!128;UBERON:0003350!4.93e-07!9;UBERON:0004808!4.93e-07!9;UBERON:0001277!4.93e-07!9;UBERON:0004921!5.60e-07!126;UBERON:0004185!5.60e-07!126;UBERON:0007023!9.49e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.76e-17,31;UBERON:0005409,1.00e-16,47;UBERON:0000344,6.79e-12,15;UBERON:0001242,1.50e-10,13;UBERON:0001262,1.50e-10,13;UBERON:0004786,1.50e-10,13;UBERON:0004119,3.14e-10,118;UBERON:0000925,3.14e-10,118;UBERON:0006595,3.14e-10,118;UBERON:0001007,1.31e-09,116;UBERON:0001555,1.31e-09,116;UBERON:0007026,1.31e-09,116;UBERON:0005153,2.96e-09,17;UBERON:0004921,1.01e-08,114;UBERON:0003350,2.49e-08,9;UBERON:0004808,2.49e-08,9;UBERON:0001277,2.49e-08,9;UBERON:0004923,1.17e-07,24;UBERON:0002048,1.35e-07,14;UBERON:0000117,1.35e-07,14;UBERON:0000171,1.35e-07,14;UBERON:0000170,1.35e-07,14;UBERON:0005597,1.35e-07,14;UBERON:0000118,1.35e-07,14;UBERON:0000485,4.33e-07,11;UBERON:0005157,6.26e-07,20;UBERON:0007023,8.74e-07,51|phase1_expression=0.640595388419176,6.2815573375085,9.55498402718026,9.0739263392049,14.0250804384977,12.4230661214798,9.57811826441655,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,3.82694805679814,2.6808556824239,5.22399578277871,9.11956809922418,8.94696196161963,8.03924749761028,3.87685796543167,9.26526300549323,5.32065574477847,4.53654233567875,5.09980174507201,0,0,0,21.086168241843,20.613096024453,17.3543952823014,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,1.30815093828268,2.85592037554813,3.69416808241138,0.419959264876088,0,0,0.725362142011344,0,0,0.573066879877513,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0,0,0,0,1.3959149950069,0,0.45839474333043,0.294628585473668,0,0,0,0,3.18850937571846,0,0,0,0,0,4.21333260395256,0.170430322578058,0,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,1.01343946190039,1.01104889002957,5.02409070763864,0.258937883647172,1.92974780784272,0,0.304465478312141,0.691846491768175,0.301445281105245,0.117588707135705,0.628332956648377,3.46072954828123,1.15679485535929,0.884610551949874,0.161766849947409,0.883366073841574,0,5.59175283654366,0.292780797011547,0.41889341362691,14.0501380364725,0,0,0,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,1.01839363850316,0.995255764880744,8.33985102831127,11.995185785529,0.260240885925407,0.689706313300419,0.180062129805349,1.05493372485001,1.08858398642125,1.15302348256365,1.03071897015702,9.05461797586555,0.862271971731369,1.13463648100692,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0.329119699826961,0.32833492815819,0.729619285912702,1.02339991197733,0.439100230582101,0.402619256281115,0.210289948564127,0.411618449517138,15.5296828002385,4.7601101999438,0.639864751605702,0.696710015581316,3.47942145569652,2.42020229548011,4.00280478920767,4.37518940058886,9.01605216934572,4.11747386810027,3.01602250560323,4.97391180102877,8.38345574612217,14.3811105384675,10.3746263939853,8.76221602319216,0.569003702859245,1.71372768914593,0,1.01825663922657,2.13347735884388,2.73529697572242,4.42655759869801,8.56138858281692,9.10592621479974,6.29325536001183,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0,8.49864674766381,0.37898282354097,1.62964976442026,1.52770577197669,2.11221223459652,8.87783164441623,12.1402256851867,9.95181604074774,8.35466263762812,8.41565820665345,12.437471955284,9.01248230936559,9.32498902075836,9.25753974921674,0,0,15.2446924635901,9.65778612066564,0.642202359951168,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.84522110770749,1.24645922567079,1.46598263418218,5.1140738121486,3.98235415019888,1.21390318077491,0.906970670894253,2.45186603682668,2.36241514304618,3.68922177532713,2.06742634534577,2.90826983582004,2.13898427030833,3.47640433729398,6.32511651449993,8.25084345985495,1.36175842301515,1.08036656418786,0.258717367565509,0.643011105094777,0.532020700926821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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20446 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P70277 | |||
|association_with_transcript=0bp_to_ENSMUST00000079545_5end | |||
|cluster_id=chr11:116556116..116556196,- | |||
|description=CAGE_peak_3_at_St6galnac2_5end | |||
|id=chr11:116556116..116556196,- | |||
|ontology_enrichment_celltype=CL:0002563!4.93e-07!9;CL:0002251!4.93e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.49e-08,9;CL:0002251,2.49e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.19e-18!43;UBERON:0005409!6.53e-18!59;UBERON:0000344!6.36e-10!15;UBERON:0001242!7.81e-09!13;UBERON:0000060!7.81e-09!13;UBERON:0001262!7.81e-09!13;UBERON:0004786!7.81e-09!13;UBERON:0004119!3.71e-08!130;UBERON:0000925!3.71e-08!130;UBERON:0006595!3.71e-08!130;UBERON:0005153!4.76e-08!17;UBERON:0000464!6.71e-08!57;UBERON:0001007!1.14e-07!128;UBERON:0001555!1.14e-07!128;UBERON:0007026!1.14e-07!128;UBERON:0003350!4.93e-07!9;UBERON:0004808!4.93e-07!9;UBERON:0001277!4.93e-07!9;UBERON:0004921!5.60e-07!126;UBERON:0004185!5.60e-07!126;UBERON:0007023!9.49e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.76e-17,31;UBERON:0005409,1.00e-16,47;UBERON:0000344,6.79e-12,15;UBERON:0001242,1.50e-10,13;UBERON:0001262,1.50e-10,13;UBERON:0004786,1.50e-10,13;UBERON:0004119,3.14e-10,118;UBERON:0000925,3.14e-10,118;UBERON:0006595,3.14e-10,118;UBERON:0001007,1.31e-09,116;UBERON:0001555,1.31e-09,116;UBERON:0007026,1.31e-09,116;UBERON:0005153,2.96e-09,17;UBERON:0004921,1.01e-08,114;UBERON:0003350,2.49e-08,9;UBERON:0004808,2.49e-08,9;UBERON:0001277,2.49e-08,9;UBERON:0004923,1.17e-07,24;UBERON:0002048,1.35e-07,14;UBERON:0000117,1.35e-07,14;UBERON:0000171,1.35e-07,14;UBERON:0000170,1.35e-07,14;UBERON:0005597,1.35e-07,14;UBERON:0000118,1.35e-07,14;UBERON:0000485,4.33e-07,11;UBERON:0005157,6.26e-07,20;UBERON:0007023,8.74e-07,51 | |||
|phase1_expression=0.640595388419176,6.2815573375085,9.55498402718026,9.0739263392049,14.0250804384977,12.4230661214798,9.57811826441655,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,3.82694805679814,2.6808556824239,5.22399578277871,9.11956809922418,8.94696196161963,8.03924749761028,3.87685796543167,9.26526300549323,5.32065574477847,4.53654233567875,5.09980174507201,0,0,0,21.086168241843,20.613096024453,17.3543952823014,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,1.30815093828268,2.85592037554813,3.69416808241138,0.419959264876088,0,0,0.725362142011344,0,0,0.573066879877513,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0,0,0,0,1.3959149950069,0,0.45839474333043,0.294628585473668,0,0,0,0,3.18850937571846,0,0,0,0,0,4.21333260395256,0.170430322578058,0,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,1.01343946190039,1.01104889002957,5.02409070763864,0.258937883647172,1.92974780784272,0,0.304465478312141,0.691846491768175,0.301445281105245,0.117588707135705,0.628332956648377,3.46072954828123,1.15679485535929,0.884610551949874,0.161766849947409,0.883366073841574,0,5.59175283654366,0.292780797011547,0.41889341362691,14.0501380364725,0,0,0,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,1.01839363850316,0.995255764880744,8.33985102831127,11.995185785529,0.260240885925407,0.689706313300419,0.180062129805349,1.05493372485001,1.08858398642125,1.15302348256365,1.03071897015702,9.05461797586555,0.862271971731369,1.13463648100692,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0.329119699826961,0.32833492815819,0.729619285912702,1.02339991197733,0.439100230582101,0.402619256281115,0.210289948564127,0.411618449517138,15.5296828002385,4.7601101999438,0.639864751605702,0.696710015581316,3.47942145569652,2.42020229548011,4.00280478920767,4.37518940058886,9.01605216934572,4.11747386810027,3.01602250560323,4.97391180102877,8.38345574612217,14.3811105384675,10.3746263939853,8.76221602319216,0.569003702859245,1.71372768914593,0,1.01825663922657,2.13347735884388,2.73529697572242,4.42655759869801,8.56138858281692,9.10592621479974,6.29325536001183,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0,8.49864674766381,0.37898282354097,1.62964976442026,1.52770577197669,2.11221223459652,8.87783164441623,12.1402256851867,9.95181604074774,8.35466263762812,8.41565820665345,12.437471955284,9.01248230936559,9.32498902075836,9.25753974921674,0,0,15.2446924635901,9.65778612066564,0.642202359951168,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.84522110770749,1.24645922567079,1.46598263418218,5.1140738121486,3.98235415019888,1.21390318077491,0.906970670894253,2.45186603682668,2.36241514304618,3.68922177532713,2.06742634534577,2.90826983582004,2.13898427030833,3.47640433729398,6.32511651449993,8.25084345985495,1.36175842301515,1.08036656418786,0.258717367565509,0.643011105094777,0.532020700926821,0.356737635204141,0.987294123612726,1.2178597964584,1.17335854031855,9.53244318887191,1.7642271844397,1.81374878235628,1.13025098687134,1.44751019827574,0.954978752025092,2.62625439592098,6.70405924248657,0.370850604021019,0.170870880797853,0.619160603889667,0,0,0.410082683163076,0,0,0,0,20.0480829783174,1.42351197111511,1.82987520414164,4.10420295122845,3.13632444021703,4.80397640241591,3.9110660451598,4.62859352061881,5.23511883968059,6.35113369129785,11.8054469486516,0.56369293868419,1.19613236835183,0.827292452285488,0.972255941720238,0.516639293910924,0.506868376472335,0.58678619322877,0.651021924219751,1.15345278868282,0.724752362478018,0.864090018773596,0,1.62180172232131,1.23253148597793,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0,3.40095575422817,2.66383144048878,2.78112955489375,2.01461539636894,5.02292944483695,2.25218970541418,4.57879060668163,25.5098371104088,2.00628841614145,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,1.19707462020309,0.682934423016537,0.486213434136588,0.838452650511929,0.919217542250071,1.33348036680969,0.824140228955577,0.320919209591815,1.51618327058278,1.01391719956096,0.377252682772152,1.591905626988,1.34452820050225,1.03383844120104,1.90517476513229,1.27472758539341,0.964546102318525,2.47251540481984,0.441596760403192,1.71434626192708,1.24233064311536,1.1921809497366,0.726732083161643,1.03520318456864,0.423073039458382,1.09756783723664,1.05227884575137,0.950628796921032,1.68342681497322,0.118635018124174,1.37906275325789,0.409231043169689,0.619747364743864,0.964533054905707,0,1.16965804222704,2.36358159453128,0,0.882365676478062,0.695603506861264 | |||
|short_description=p3@St6galnac2 | |||
}} |
Revision as of 12:24, 5 August 2015
Short description: | p3@St6galnac2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_St6galnac2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000079545_5end |
EntrezGene: | 20446 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.49e-08 | 9 |
epithelial cell of alimentary canal | 2.49e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.76e-17 | 31 |
gastrointestinal system | 1.00e-16 | 47 |
mucosa | 6.79e-12 | 15 |
intestinal mucosa | 1.50e-10 | 13 |
wall of intestine | 1.50e-10 | 13 |
gastrointestinal system mucosa | 1.50e-10 | 13 |
endoderm-derived structure | 3.14e-10 | 118 |
endoderm | 3.14e-10 | 118 |
presumptive endoderm | 3.14e-10 | 118 |
digestive system | 1.31e-09 | 116 |
digestive tract | 1.31e-09 | 116 |
primitive gut | 1.31e-09 | 116 |
epithelial bud | 2.96e-09 | 17 |
subdivision of digestive tract | 1.01e-08 | 114 |
epithelium of mucosa | 2.49e-08 | 9 |
gastrointestinal system epithelium | 2.49e-08 | 9 |
intestinal epithelium | 2.49e-08 | 9 |
organ component layer | 1.17e-07 | 24 |
lung | 1.35e-07 | 14 |
respiratory tube | 1.35e-07 | 14 |
respiration organ | 1.35e-07 | 14 |
pair of lungs | 1.35e-07 | 14 |
lung primordium | 1.35e-07 | 14 |
lung bud | 1.35e-07 | 14 |
simple columnar epithelium | 4.33e-07 | 11 |
epithelial fold | 6.26e-07 | 20 |
adult organism | 8.74e-07 | 51 |