FFCP PHASE1:Mm9::chr15:78994288..78994299,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78994288..78994299,-|id=chr15:78994288..78994299,-|ontology_enrichment_celltype=CL:0000107!7.10e-18!9;CL:0000221!1.52e-11!44;CL:0000133!1.52e-11!44;CL:0002319!1.89e-10!43;CL:0000540!7.71e-10!33;CL:0000047!7.71e-10!33;CL:0000031!7.71e-10!33;CL:0000404!7.71e-10!33;CL:0000055!2.54e-08!50;CL:0000393!9.80e-08!39;CL:0000211!9.80e-08!39;CL:0000630!5.31e-07!3|ontology_enrichment_celltype_v019_2=CL:0000107,4.30e-39,9;CL:0000217,2.50e-20,2;CL:0000328,2.50e-20,2;CL:0002573,2.50e-20,2;CL:0002376,2.50e-20,2;CL:0000218,2.50e-20,2;CL:0000692,2.50e-20,2;CL:0002377,2.50e-20,2;CL:0002375,2.50e-20,2;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002319,2.29e-14,43;CL:0000215,6.65e-14,3;CL:0002321,4.95e-11,70;CL:0000540,1.03e-10,33;CL:0000047,1.03e-10,33;CL:0000031,1.03e-10,33;CL:0000404,1.03e-10,33;CL:0000710,1.12e-10,1;CL:0002077,1.12e-10,1;CL:0005014,1.12e-10,1;CL:0002315,1.12e-10,1;CL:0002490,1.12e-10,1;CL:0000393,4.67e-09,39;CL:0000211,4.67e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.42e-21!11;UBERON:0002410!7.10e-18!9;UBERON:0004121!1.21e-15!102;UBERON:0000924!1.21e-15!102;UBERON:0006601!1.21e-15!102;UBERON:0005085!6.79e-11!13;UBERON:0000020!1.51e-09!12;UBERON:0001032!1.51e-09!12;UBERON:0004456!1.51e-09!12;UBERON:0000073!1.53e-09!75;UBERON:0001016!1.53e-09!75;UBERON:0002346!4.89e-08!71;UBERON:0003075!4.89e-08!71;UBERON:0007284!4.89e-08!71;UBERON:0001017!7.38e-08!73;UBERON:0005743!7.38e-08!73;UBERON:0000970!7.86e-08!9;UBERON:0000019!7.86e-08!9;UBERON:0000047!7.86e-08!9;UBERON:0004088!7.86e-08!9;UBERON:0002104!7.86e-08!9;UBERON:0001456!7.86e-08!9;UBERON:0003072!7.86e-08!9;UBERON:0003071!7.86e-08!9;UBERON:0004128!7.86e-08!9;UBERON:0002240!9.45e-08!6;UBERON:0005174!9.45e-08!6;UBERON:0001137!9.45e-08!6;UBERON:0000011!2.99e-07!3;UBERON:0002005!6.32e-07!3;UBERON:0005428!6.32e-07!3;UBERON:0000013!7.20e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.37e-56,11;UBERON:0002410,4.30e-39,9;UBERON:0000011,1.46e-30,3;UBERON:0000013,1.20e-13,3;UBERON:0001016,4.08e-08,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,1.66597625333005,1.36028808192214,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.780877488593277,1.93881057959519,3.10659437338318,1.78238939265915,3.39691836946599,1.21443210502468,0.584511715822624,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0,0.220591419119515,0|short_description=p@chr15:78994288..78994299,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:78994288..78994299,- | |||
|description=CAGE_peak_at_chr15:78994288..78994299,- | |||
|id=chr15:78994288..78994299,- | |||
|ontology_enrichment_celltype=CL:0000107!7.10e-18!9;CL:0000221!1.52e-11!44;CL:0000133!1.52e-11!44;CL:0002319!1.89e-10!43;CL:0000540!7.71e-10!33;CL:0000047!7.71e-10!33;CL:0000031!7.71e-10!33;CL:0000404!7.71e-10!33;CL:0000055!2.54e-08!50;CL:0000393!9.80e-08!39;CL:0000211!9.80e-08!39;CL:0000630!5.31e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.30e-39,9;CL:0000217,2.50e-20,2;CL:0000328,2.50e-20,2;CL:0002573,2.50e-20,2;CL:0002376,2.50e-20,2;CL:0000218,2.50e-20,2;CL:0000692,2.50e-20,2;CL:0002377,2.50e-20,2;CL:0002375,2.50e-20,2;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002319,2.29e-14,43;CL:0000215,6.65e-14,3;CL:0002321,4.95e-11,70;CL:0000540,1.03e-10,33;CL:0000047,1.03e-10,33;CL:0000031,1.03e-10,33;CL:0000404,1.03e-10,33;CL:0000710,1.12e-10,1;CL:0002077,1.12e-10,1;CL:0005014,1.12e-10,1;CL:0002315,1.12e-10,1;CL:0002490,1.12e-10,1;CL:0000393,4.67e-09,39;CL:0000211,4.67e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.42e-21!11;UBERON:0002410!7.10e-18!9;UBERON:0004121!1.21e-15!102;UBERON:0000924!1.21e-15!102;UBERON:0006601!1.21e-15!102;UBERON:0005085!6.79e-11!13;UBERON:0000020!1.51e-09!12;UBERON:0001032!1.51e-09!12;UBERON:0004456!1.51e-09!12;UBERON:0000073!1.53e-09!75;UBERON:0001016!1.53e-09!75;UBERON:0002346!4.89e-08!71;UBERON:0003075!4.89e-08!71;UBERON:0007284!4.89e-08!71;UBERON:0001017!7.38e-08!73;UBERON:0005743!7.38e-08!73;UBERON:0000970!7.86e-08!9;UBERON:0000019!7.86e-08!9;UBERON:0000047!7.86e-08!9;UBERON:0004088!7.86e-08!9;UBERON:0002104!7.86e-08!9;UBERON:0001456!7.86e-08!9;UBERON:0003072!7.86e-08!9;UBERON:0003071!7.86e-08!9;UBERON:0004128!7.86e-08!9;UBERON:0002240!9.45e-08!6;UBERON:0005174!9.45e-08!6;UBERON:0001137!9.45e-08!6;UBERON:0000011!2.99e-07!3;UBERON:0002005!6.32e-07!3;UBERON:0005428!6.32e-07!3;UBERON:0000013!7.20e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.37e-56,11;UBERON:0002410,4.30e-39,9;UBERON:0000011,1.46e-30,3;UBERON:0000013,1.20e-13,3;UBERON:0001016,4.08e-08,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,1.66597625333005,1.36028808192214,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.780877488593277,1.93881057959519,3.10659437338318,1.78238939265915,3.39691836946599,1.21443210502468,0.584511715822624,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr15:78994288..78994299,- | |||
}} |
Latest revision as of 15:11, 5 August 2015
Short description: | p@chr15:78994288..78994299, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78994288..78994299, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.30e-39 | 9 |
insulating cell | 2.50e-20 | 2 |
myelin accumulating cell | 2.50e-20 | 2 |
Schwann cell | 2.50e-20 | 2 |
non-myelinating Schwann cell | 2.50e-20 | 2 |
myelinating Schwann cell;;Schwann cell | 2.50e-20 | 2 |
terminal Schwann cell | 2.50e-20 | 2 |
immature Schwann cell | 2.50e-20 | 2 |
Schwann cell precursor | 2.50e-20 | 2 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
neural cell | 2.29e-14 | 43 |
barrier cell | 6.65e-14 | 3 |
embryonic cell | 4.95e-11 | 70 |
neuron | 1.03e-10 | 33 |
neuronal stem cell | 1.03e-10 | 33 |
neuroblast | 1.03e-10 | 33 |
electrically signaling cell | 1.03e-10 | 33 |
neurecto-epithelial cell | 1.12e-10 | 1 |
ecto-epithelial cell | 1.12e-10 | 1 |
auditory epithelial support cell | 1.12e-10 | 1 |
supporting cell of cochlea | 1.12e-10 | 1 |
organ of Corti supporting cell | 1.12e-10 | 1 |
electrically responsive cell | 4.67e-09 | 39 |
electrically active cell | 4.67e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.37e-56 | 11 |
autonomic nervous system | 4.30e-39 | 9 |
parasympathetic nervous system | 1.46e-30 | 3 |
sympathetic nervous system | 1.20e-13 | 3 |
nervous system | 4.08e-08 | 75 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |