FFCP PHASE1:Mm9::chr4:62131958..62131966,-: Difference between revisions
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{{FFCP|EntrezGene=71354|HGNC=|MCL_coexpression_id=0|UniProt=B7ZCH5|association_with_transcript=-28bp_to_ENSMUST00000155522_5end|description=CAGE_peak_2_at_Wdr31_5end|id=chr4:62131958..62131966,-|ontology_enrichment_celltype=CL:0000540!4.58e-09!33;CL:0000047!4.58e-09!33;CL:0000031!4.58e-09!33;CL:0000404!4.58e-09!33;CL:0000117!1.26e-08!23;CL:0000337!1.26e-08!23;CL:0002319!5.26e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,2.34e-26,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.20e-13!73;UBERON:0005743!1.20e-13!73;UBERON:0002346!6.76e-13!71;UBERON:0003075!6.76e-13!71;UBERON:0007284!6.76e-13!71;UBERON:0000073!8.63e-13!75;UBERON:0001016!8.63e-13!75;UBERON:0001049!1.78e-12!52;UBERON:0005068!1.78e-12!52;UBERON:0006241!1.78e-12!52;UBERON:0007135!1.78e-12!52;UBERON:0000955!3.46e-11!50;UBERON:0006238!3.46e-11!50;UBERON:0000033!8.55e-11!63;UBERON:0002616!1.45e-10!49;UBERON:0004121!1.56e-09!102;UBERON:0000924!1.56e-09!102;UBERON:0006601!1.56e-09!102;UBERON:0003056!1.34e-08!49;UBERON:0003080!3.09e-08!40;UBERON:0007811!4.87e-08!86;UBERON:0000153!1.12e-07!94;UBERON:0002780!1.29e-07!39;UBERON:0001890!1.29e-07!39;UBERON:0006240!1.29e-07!39;UBERON:0002020!3.26e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.21e-34,4;UBERON:0001891,1.21e-34,4;UBERON:0009616,1.21e-34,4;UBERON:0010286,1.21e-34,4;UBERON:0002038,2.34e-26,3;UBERON:0009663,2.34e-26,3;UBERON:0009661,2.34e-26,3;UBERON:0000125,2.34e-26,3;UBERON:0002308,2.34e-26,3;UBERON:0002420,2.52e-10,8;UBERON:0007245,2.52e-10,8;UBERON:0010009,2.52e-10,8;UBERON:0010011,2.52e-10,8;UBERON:0000454,2.52e-10,8;UBERON:0002259,5.62e-10,1;UBERON:0002314,5.62e-10,1;UBERON:0004061,5.62e-10,1;UBERON:0006777,5.62e-10,1;UBERON:0005882,5.62e-10,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0.919218786610021,0,0.510749352340751,0.768032666281217,0.395658863190582,0.182975287204819,0.52091337055676,1.11673199600552,1.68828783009504,1.06958773443767,0.294628585473668,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.3481157546434,0,0.502617408451458,0.173824320192276,0,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0,0.459804208866946,0,0,0.272145996605311,0.512454881139399,0.0937017245597288,1.55222022443409,0,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.442830443938806,0.627994911365499,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.234423373184406,0.163934945376675,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0.276399947608848,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,10.1464728963154,0.448549638131936,0.330916980914195,0.388902376688095,0.129159823477731,0,0,0,0.524296722128554,2.89900944991207,6.62469014393091,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0,0|short_description=p2@Wdr31}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71354 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZCH5 | |||
|association_with_transcript=-28bp_to_ENSMUST00000155522_5end | |||
|cluster_id=chr4:62131958..62131966,- | |||
|description=CAGE_peak_2_at_Wdr31_5end | |||
|id=chr4:62131958..62131966,- | |||
|ontology_enrichment_celltype=CL:0000540!4.58e-09!33;CL:0000047!4.58e-09!33;CL:0000031!4.58e-09!33;CL:0000404!4.58e-09!33;CL:0000117!1.26e-08!23;CL:0000337!1.26e-08!23;CL:0002319!5.26e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.34e-26,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.20e-13!73;UBERON:0005743!1.20e-13!73;UBERON:0002346!6.76e-13!71;UBERON:0003075!6.76e-13!71;UBERON:0007284!6.76e-13!71;UBERON:0000073!8.63e-13!75;UBERON:0001016!8.63e-13!75;UBERON:0001049!1.78e-12!52;UBERON:0005068!1.78e-12!52;UBERON:0006241!1.78e-12!52;UBERON:0007135!1.78e-12!52;UBERON:0000955!3.46e-11!50;UBERON:0006238!3.46e-11!50;UBERON:0000033!8.55e-11!63;UBERON:0002616!1.45e-10!49;UBERON:0004121!1.56e-09!102;UBERON:0000924!1.56e-09!102;UBERON:0006601!1.56e-09!102;UBERON:0003056!1.34e-08!49;UBERON:0003080!3.09e-08!40;UBERON:0007811!4.87e-08!86;UBERON:0000153!1.12e-07!94;UBERON:0002780!1.29e-07!39;UBERON:0001890!1.29e-07!39;UBERON:0006240!1.29e-07!39;UBERON:0002020!3.26e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.21e-34,4;UBERON:0001891,1.21e-34,4;UBERON:0009616,1.21e-34,4;UBERON:0010286,1.21e-34,4;UBERON:0002038,2.34e-26,3;UBERON:0009663,2.34e-26,3;UBERON:0009661,2.34e-26,3;UBERON:0000125,2.34e-26,3;UBERON:0002308,2.34e-26,3;UBERON:0002420,2.52e-10,8;UBERON:0007245,2.52e-10,8;UBERON:0010009,2.52e-10,8;UBERON:0010011,2.52e-10,8;UBERON:0000454,2.52e-10,8;UBERON:0002259,5.62e-10,1;UBERON:0002314,5.62e-10,1;UBERON:0004061,5.62e-10,1;UBERON:0006777,5.62e-10,1;UBERON:0005882,5.62e-10,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0.919218786610021,0,0.510749352340751,0.768032666281217,0.395658863190582,0.182975287204819,0.52091337055676,1.11673199600552,1.68828783009504,1.06958773443767,0.294628585473668,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.3481157546434,0,0.502617408451458,0.173824320192276,0,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0,0.459804208866946,0,0,0.272145996605311,0.512454881139399,0.0937017245597288,1.55222022443409,0,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.442830443938806,0.627994911365499,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.234423373184406,0.163934945376675,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0.276399947608848,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,10.1464728963154,0.448549638131936,0.330916980914195,0.388902376688095,0.129159823477731,0,0,0,0.524296722128554,2.89900944991207,6.62469014393091,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0,0 | |||
|short_description=p2@Wdr31 | |||
}} |
Revision as of 16:07, 5 August 2015
Short description: | p2@Wdr31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wdr31_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -28bp_to_ENSMUST00000155522_5end |
EntrezGene: | 71354 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.34e-26 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 1.21e-34 | 4 |
midbrain | 1.21e-34 | 4 |
presumptive midbrain | 1.21e-34 | 4 |
midbrain neural tube | 1.21e-34 | 4 |
substantia nigra | 2.34e-26 | 3 |
telencephalic nucleus | 2.34e-26 | 3 |
midbrain nucleus | 2.34e-26 | 3 |
neural nucleus | 2.34e-26 | 3 |
nucleus of brain | 2.34e-26 | 3 |
basal ganglion | 2.52e-10 | 8 |
nuclear complex of neuraxis | 2.52e-10 | 8 |
aggregate regional part of brain | 2.52e-10 | 8 |
collection of basal ganglia | 2.52e-10 | 8 |
cerebral subcortex | 2.52e-10 | 8 |
corpora quadrigemina | 5.62e-10 | 1 |
midbrain tectum | 5.62e-10 | 1 |
neural tube mantle layer | 5.62e-10 | 1 |
tectal plate | 5.62e-10 | 1 |
neural tube alar plate | 5.62e-10 | 1 |