FFCP PHASE1:Mm9::chr9:95715808..95715817,-: Difference between revisions
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{{FFCP|EntrezGene=102502|HGNC=|MCL_coexpression_id=12|UniProt=D3Z6J7|association_with_transcript=7bp_to_ENSMUST00000119760_5end|description=CAGE_peak_4_at_Pls1_5end|id=chr9:95715808..95715817,-|ontology_enrichment_celltype=CL:0000075!6.03e-09!7;CL:0002563!1.44e-08!9;CL:0002251!1.44e-08!9;CL:0000239!1.74e-08!6;CL:0000677!1.74e-08!6;CL:0000212!1.74e-08!6;CL:0000584!1.74e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,2.12e-15,6;CL:0000677,2.12e-15,6;CL:0000584,2.12e-15,6;CL:0000075,4.17e-13,7;CL:0002563,4.81e-10,9;CL:0002251,4.81e-10,9;CL:0000682,1.12e-08,3;CL:0000066,4.72e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.71e-20!43;UBERON:0000344!6.39e-16!15;UBERON:0005409!2.50e-14!59;UBERON:0001242!1.21e-13!13;UBERON:0000060!1.21e-13!13;UBERON:0001262!1.21e-13!13;UBERON:0004786!1.21e-13!13;UBERON:0004923!1.78e-09!24;UBERON:0003350!1.44e-08!9;UBERON:0004808!1.44e-08!9;UBERON:0001277!1.44e-08!9;UBERON:0000485!4.44e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-49,31;UBERON:0005409,3.60e-33,47;UBERON:0000344,8.54e-24,15;UBERON:0001242,2.10e-19,13;UBERON:0001262,2.10e-19,13;UBERON:0004786,2.10e-19,13;UBERON:0004923,6.87e-14,24;UBERON:0001007,3.12e-12,116;UBERON:0001555,3.12e-12,116;UBERON:0007026,3.12e-12,116;UBERON:0004119,6.37e-12,118;UBERON:0000925,6.37e-12,118;UBERON:0006595,6.37e-12,118;UBERON:0002108,1.07e-11,4;UBERON:0004921,2.64e-10,114;UBERON:0003350,4.81e-10,9;UBERON:0004808,4.81e-10,9;UBERON:0001277,4.81e-10,9;UBERON:0000331,2.75e-09,3;UBERON:0002116,2.75e-09,3;UBERON:0001204,2.75e-09,3;UBERON:0001168,2.75e-09,3;UBERON:0000485,4.29e-08,11|phase1_expression=0,16.40184415905,8.18998630901165,21.7774232140918,15.5277676283368,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.83962871687693,6.42345986988076,12.6331032105304,11.1998119001359,7.54149314400612,54.1566745450666,20.1624103807945,9.97787297948871,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,28.3557331281536,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.6589976091044,11.9002754998595,0,0,0.128867461322093,2.8235693447268,6.0042071838115,6.46767128782701,21.353807769503,6.91735609840846,2.76468729680296,4.97391180102877,4.67913809085888,17.0775687644302,16.2103537406021,18.3209971394018,0,0,0,0,0,0,0.442655759869801,1.03327103585722,1.41298855057237,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0.935726433781634,0.214871054048298,0,0,0|short_description=p4@Pls1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102502 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z6J7 | |||
|association_with_transcript=7bp_to_ENSMUST00000119760_5end | |||
|cluster_id=chr9:95715808..95715817,- | |||
|description=CAGE_peak_4_at_Pls1_5end | |||
|id=chr9:95715808..95715817,- | |||
|ontology_enrichment_celltype=CL:0000075!6.03e-09!7;CL:0002563!1.44e-08!9;CL:0002251!1.44e-08!9;CL:0000239!1.74e-08!6;CL:0000677!1.74e-08!6;CL:0000212!1.74e-08!6;CL:0000584!1.74e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.12e-15,6;CL:0000677,2.12e-15,6;CL:0000584,2.12e-15,6;CL:0000075,4.17e-13,7;CL:0002563,4.81e-10,9;CL:0002251,4.81e-10,9;CL:0000682,1.12e-08,3;CL:0000066,4.72e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.71e-20!43;UBERON:0000344!6.39e-16!15;UBERON:0005409!2.50e-14!59;UBERON:0001242!1.21e-13!13;UBERON:0000060!1.21e-13!13;UBERON:0001262!1.21e-13!13;UBERON:0004786!1.21e-13!13;UBERON:0004923!1.78e-09!24;UBERON:0003350!1.44e-08!9;UBERON:0004808!1.44e-08!9;UBERON:0001277!1.44e-08!9;UBERON:0000485!4.44e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-49,31;UBERON:0005409,3.60e-33,47;UBERON:0000344,8.54e-24,15;UBERON:0001242,2.10e-19,13;UBERON:0001262,2.10e-19,13;UBERON:0004786,2.10e-19,13;UBERON:0004923,6.87e-14,24;UBERON:0001007,3.12e-12,116;UBERON:0001555,3.12e-12,116;UBERON:0007026,3.12e-12,116;UBERON:0004119,6.37e-12,118;UBERON:0000925,6.37e-12,118;UBERON:0006595,6.37e-12,118;UBERON:0002108,1.07e-11,4;UBERON:0004921,2.64e-10,114;UBERON:0003350,4.81e-10,9;UBERON:0004808,4.81e-10,9;UBERON:0001277,4.81e-10,9;UBERON:0000331,2.75e-09,3;UBERON:0002116,2.75e-09,3;UBERON:0001204,2.75e-09,3;UBERON:0001168,2.75e-09,3;UBERON:0000485,4.29e-08,11 | |||
|phase1_expression=0,16.40184415905,8.18998630901165,21.7774232140918,15.5277676283368,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.83962871687693,6.42345986988076,12.6331032105304,11.1998119001359,7.54149314400612,54.1566745450666,20.1624103807945,9.97787297948871,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,28.3557331281536,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.6589976091044,11.9002754998595,0,0,0.128867461322093,2.8235693447268,6.0042071838115,6.46767128782701,21.353807769503,6.91735609840846,2.76468729680296,4.97391180102877,4.67913809085888,17.0775687644302,16.2103537406021,18.3209971394018,0,0,0,0,0,0,0.442655759869801,1.03327103585722,1.41298855057237,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0.935726433781634,0.214871054048298,0,0,0 | |||
|short_description=p4@Pls1 | |||
}} |
Revision as of 19:21, 5 August 2015
Short description: | p4@Pls1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pls1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 7bp_to_ENSMUST00000119760_5end |
EntrezGene: | 102502 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.12e-15 | 6 |
gut absorptive cell | 2.12e-15 | 6 |
enterocyte | 2.12e-15 | 6 |
columnar/cuboidal epithelial cell | 4.17e-13 | 7 |
intestinal epithelial cell | 4.81e-10 | 9 |
epithelial cell of alimentary canal | 4.81e-10 | 9 |
M cell of gut | 1.12e-08 | 3 |
epithelial cell | 4.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.47e-49 | 31 |
gastrointestinal system | 3.60e-33 | 47 |
mucosa | 8.54e-24 | 15 |
intestinal mucosa | 2.10e-19 | 13 |
wall of intestine | 2.10e-19 | 13 |
gastrointestinal system mucosa | 2.10e-19 | 13 |
organ component layer | 6.87e-14 | 24 |
digestive system | 3.12e-12 | 116 |
digestive tract | 3.12e-12 | 116 |
primitive gut | 3.12e-12 | 116 |
endoderm-derived structure | 6.37e-12 | 118 |
endoderm | 6.37e-12 | 118 |
presumptive endoderm | 6.37e-12 | 118 |
small intestine | 1.07e-11 | 4 |
subdivision of digestive tract | 2.64e-10 | 114 |
epithelium of mucosa | 4.81e-10 | 9 |
gastrointestinal system epithelium | 4.81e-10 | 9 |
intestinal epithelium | 4.81e-10 | 9 |
ileal mucosa | 2.75e-09 | 3 |
ileum | 2.75e-09 | 3 |
mucosa of small intestine | 2.75e-09 | 3 |
wall of small intestine | 2.75e-09 | 3 |
simple columnar epithelium | 4.29e-08 | 11 |