FFCP PHASE1:Mm9::chr6:4709526..4709537,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:4709526..4709537,+ | |||
|description=CAGE_peak_at_chr6:4709526..4709537,+ | |description=CAGE_peak_at_chr6:4709526..4709537,+ | ||
|id=chr6:4709526..4709537,+ | |id=chr6:4709526..4709537,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.18e-07,3;CL:0000351,3.18e-07,3;CL:0002610,5.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!7.93e-07!7;UBERON:0006858!7.93e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.99e-24,3;UBERON:0000478,2.99e-24,3;UBERON:0000158,2.99e-24,3;UBERON:0000305,7.74e-19,1;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0000358,3.18e-07,3;UBERON:0000307,3.18e-07,3;UBERON:0007010,3.18e-07,3;UBERON:0004871,3.64e-07,3;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.614426133024974,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,1.15307748628029,0.452167921657868,0.117588707135705,0.251333182659351,1.73036477414062,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0.354680467284547,0,0,0.304464949114599,1.17335854031855,0.847328283455281,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.62799699626633,2.3503846290971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0.394017929502254,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.614426133024974,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,1.15307748628029,0.452167921657868,0.117588707135705,0.251333182659351,1.73036477414062,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0.354680467284547,0,0,0.304464949114599,1.17335854031855,0.847328283455281,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.62799699626633,2.3503846290971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0.394017929502254,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr6:4709526..4709537,+ | |short_description=p@chr6:4709526..4709537,+ | ||
}} | }} |
Latest revision as of 19:23, 5 August 2015
Short description: | p@chr6:4709526..4709537, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:4709526..4709537, + |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.18e-07 | 3 |
trophoblast cell | 3.18e-07 | 3 |
raphe nuclei neuron | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.99e-24 | 3 |
extraembryonic structure | 2.99e-24 | 3 |
membranous layer | 2.99e-24 | 3 |
amnion | 7.74e-19 | 1 |
placenta | 5.06e-10 | 2 |
chorion | 5.06e-10 | 2 |
allantois | 5.06e-10 | 2 |
blastocyst | 3.18e-07 | 3 |
blastula | 3.18e-07 | 3 |
cleaving embryo | 3.18e-07 | 3 |
somatic layer of lateral plate mesoderm | 3.64e-07 | 3 |
raphe nuclei | 5.46e-07 | 3 |
reticular formation | 5.46e-07 | 3 |