FFCP PHASE1:Mm9::chr8:107524724..107524732,+: Difference between revisions
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|id=chr8:107524724..107524732,+
|short_description=p@chr8:107524724..107524732,+
|description=CAGE_peak_at_chr8:107524724..107524732,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:107524724..107524732,+ | |||
|description=CAGE_peak_at_chr8:107524724..107524732,+ | |||
|id=chr8:107524724..107524732,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.18e-13!9;CL:0002251!1.18e-13!9;CL:0000239!9.85e-13!6;CL:0000677!9.85e-13!6;CL:0000212!9.85e-13!6;CL:0000584!9.85e-13!6;CL:0000066!6.15e-11!25;CL:0000075!8.92e-11!7;CL:0000223!2.63e-08!20;CL:0002076!1.50e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-20,6;CL:0000677,3.71e-20,6;CL:0000584,3.71e-20,6;CL:0000075,2.89e-17,7;CL:0002563,2.11e-13,9;CL:0002251,2.11e-13,9;CL:0000066,5.08e-11,25;CL:0000223,3.57e-08,20;CL:0002076,5.73e-08,15;CL:0000682,8.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.44e-25!43;UBERON:0005409!1.79e-21!59;UBERON:0000344!4.37e-21!15;UBERON:0001242!1.25e-17!13;UBERON:0000060!1.25e-17!13;UBERON:0001262!1.25e-17!13;UBERON:0004786!1.25e-17!13;UBERON:0003350!1.18e-13!9;UBERON:0004808!1.18e-13!9;UBERON:0001277!1.18e-13!9;UBERON:0001007!1.70e-13!128;UBERON:0001555!1.70e-13!128;UBERON:0007026!1.70e-13!128;UBERON:0004119!3.80e-13!130;UBERON:0000925!3.80e-13!130;UBERON:0006595!3.80e-13!130;UBERON:0004923!6.63e-12!24;UBERON:0004921!9.57e-12!126;UBERON:0004185!9.57e-12!126;UBERON:0000485!7.12e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.88e-28,31;UBERON:0000344,8.25e-25,15;UBERON:0001242,7.26e-23,13;UBERON:0001262,7.26e-23,13;UBERON:0004786,7.26e-23,13;UBERON:0005409,1.31e-20,47;UBERON:0004923,4.67e-15,24;UBERON:0003350,2.11e-13,9;UBERON:0004808,2.11e-13,9;UBERON:0001277,2.11e-13,9;UBERON:0002108,4.05e-11,4;UBERON:0000485,6.17e-11,11;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0004921,2.97e-08,114;UBERON:0000331,3.89e-07,3;UBERON:0002116,3.89e-07,3;UBERON:0001204,3.89e-07,3;UBERON:0001168,3.89e-07,3 | |||
|phase1_expression=0,1.39590163055744,3.18499467572675,5.74682001482977,5.50985302940982,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.45881856213434,1.14846392823004,0.86152399231815,1.07735616342945,1.90023419456374,1.26015064879965,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,12.8863325363681,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.329397909448022,0.251335208800269,0.397912944082302,0,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,3.18499467572675,5.74682001482977,5.50985302940982,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.45881856213434,1.14846392823004,0.86152399231815,1.07735616342945,1.90023419456374,1.26015064879965,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,12.8863325363681,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.329397909448022,0.251335208800269,0.397912944082302,0,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr8:107524724..107524732,+ | |||
}} | }} |
Latest revision as of 19:28, 5 August 2015
Short description: | p@chr8:107524724..107524732, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:107524724..107524732, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.71e-20 | 6 |
gut absorptive cell | 3.71e-20 | 6 |
enterocyte | 3.71e-20 | 6 |
columnar/cuboidal epithelial cell | 2.89e-17 | 7 |
intestinal epithelial cell | 2.11e-13 | 9 |
epithelial cell of alimentary canal | 2.11e-13 | 9 |
epithelial cell | 5.08e-11 | 25 |
endodermal cell | 3.57e-08 | 20 |
endo-epithelial cell | 5.73e-08 | 15 |
M cell of gut | 8.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.88e-28 | 31 |
mucosa | 8.25e-25 | 15 |
intestinal mucosa | 7.26e-23 | 13 |
wall of intestine | 7.26e-23 | 13 |
gastrointestinal system mucosa | 7.26e-23 | 13 |
gastrointestinal system | 1.31e-20 | 47 |
organ component layer | 4.67e-15 | 24 |
epithelium of mucosa | 2.11e-13 | 9 |
gastrointestinal system epithelium | 2.11e-13 | 9 |
intestinal epithelium | 2.11e-13 | 9 |
small intestine | 4.05e-11 | 4 |
simple columnar epithelium | 6.17e-11 | 11 |
digestive system | 2.40e-09 | 116 |
digestive tract | 2.40e-09 | 116 |
primitive gut | 2.40e-09 | 116 |
endoderm-derived structure | 3.84e-09 | 118 |
endoderm | 3.84e-09 | 118 |
presumptive endoderm | 3.84e-09 | 118 |
subdivision of digestive tract | 2.97e-08 | 114 |
ileal mucosa | 3.89e-07 | 3 |
ileum | 3.89e-07 | 3 |
mucosa of small intestine | 3.89e-07 | 3 |
wall of small intestine | 3.89e-07 | 3 |