FFCP PHASE1:Mm9::chr5:100813001..100813012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:100813001..100813012,- | |||
|description=CAGE_peak_at_chr5:100813001..100813012,- | |description=CAGE_peak_at_chr5:100813001..100813012,- | ||
|id=chr5:100813001..100813012,- | |id=chr5:100813001..100813012,- | ||
|ontology_enrichment_celltype=CL:0000239!2.20e-09!6;CL:0000677!2.20e-09!6;CL:0000212!2.20e-09!6;CL:0000584!2.20e-09!6;CL:0000075!5.60e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.74e-14,6;CL:0000677,5.74e-14,6;CL:0000584,5.74e-14,6;CL:0000075,5.25e-12,7;CL:0002563,2.20e-09,9;CL:0002251,2.20e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.82e-26!43;UBERON:0005409!1.07e-18!59;UBERON:0000344!4.08e-16!15;UBERON:0001242!6.02e-13!13;UBERON:0000060!6.02e-13!13;UBERON:0001262!6.02e-13!13;UBERON:0004786!6.02e-13!13;UBERON:0004923!7.16e-11!24;UBERON:0004119!6.95e-08!130;UBERON:0000925!6.95e-08!130;UBERON:0006595!6.95e-08!130;UBERON:0000331!1.62e-07!3;UBERON:0002116!1.62e-07!3;UBERON:0001204!1.62e-07!3;UBERON:0001168!1.62e-07!3;UBERON:0001007!2.35e-07!128;UBERON:0001555!2.35e-07!128;UBERON:0007026!2.35e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.42e-41,31;UBERON:0005409,1.24e-26,47;UBERON:0001242,5.26e-19,13;UBERON:0001262,5.26e-19,13;UBERON:0004786,5.26e-19,13;UBERON:0000344,2.16e-16,15;UBERON:0002108,3.32e-12,4;UBERON:0004923,5.28e-10,24;UBERON:0004921,9.32e-10,114;UBERON:0001007,1.50e-09,116;UBERON:0001555,1.50e-09,116;UBERON:0007026,1.50e-09,116;UBERON:0003350,2.20e-09,9;UBERON:0004808,2.20e-09,9;UBERON:0001277,2.20e-09,9;UBERON:0004119,2.37e-09,118;UBERON:0000925,2.37e-09,118;UBERON:0006595,2.37e-09,118;UBERON:0000331,8.07e-08,3;UBERON:0002116,8.07e-08,3;UBERON:0001204,8.07e-08,3;UBERON:0001168,8.07e-08,3;UBERON:0000485,1.04e-07,11 | |||
|phase1_expression=0,2.44282785347553,1.36499771816861,1.20985684522732,3.50627010962443,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.430942465371778,3.80046838912748,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.85115396664481,0,0,0,0.201683524623343,0.889512175379481,0.760902504450237,5.21981967698963,3.62337700392824,2.26201687920243,0.994782360205754,1.55971269695296,0.898819408654221,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,1.36499771816861,1.20985684522732,3.50627010962443,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.430942465371778,3.80046838912748,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.85115396664481,0,0,0,0.201683524623343,0.889512175379481,0.760902504450237,5.21981967698963,3.62337700392824,2.26201687920243,0.994782360205754,1.55971269695296,0.898819408654221,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:100813001..100813012,- | |short_description=p@chr5:100813001..100813012,- | ||
}} | }} |
Latest revision as of 21:16, 5 August 2015
Short description: | p@chr5:100813001..100813012, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:100813001..100813012, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.74e-14 | 6 |
gut absorptive cell | 5.74e-14 | 6 |
enterocyte | 5.74e-14 | 6 |
columnar/cuboidal epithelial cell | 5.25e-12 | 7 |
intestinal epithelial cell | 2.20e-09 | 9 |
epithelial cell of alimentary canal | 2.20e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.42e-41 | 31 |
gastrointestinal system | 1.24e-26 | 47 |
intestinal mucosa | 5.26e-19 | 13 |
wall of intestine | 5.26e-19 | 13 |
gastrointestinal system mucosa | 5.26e-19 | 13 |
mucosa | 2.16e-16 | 15 |
small intestine | 3.32e-12 | 4 |
organ component layer | 5.28e-10 | 24 |
subdivision of digestive tract | 9.32e-10 | 114 |
digestive system | 1.50e-09 | 116 |
digestive tract | 1.50e-09 | 116 |
primitive gut | 1.50e-09 | 116 |
epithelium of mucosa | 2.20e-09 | 9 |
gastrointestinal system epithelium | 2.20e-09 | 9 |
intestinal epithelium | 2.20e-09 | 9 |
endoderm-derived structure | 2.37e-09 | 118 |
endoderm | 2.37e-09 | 118 |
presumptive endoderm | 2.37e-09 | 118 |
ileal mucosa | 8.07e-08 | 3 |
ileum | 8.07e-08 | 3 |
mucosa of small intestine | 8.07e-08 | 3 |
wall of small intestine | 8.07e-08 | 3 |
simple columnar epithelium | 1.04e-07 | 11 |