FFCP PHASE1:Mm9::chr18:56559971..56560016,+: Difference between revisions
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{{FFCP|EntrezGene=107022|HGNC=|MCL_coexpression_id=12|UniProt=E9QK68,Q9D2W5,Q6PEM6|association_with_transcript=0bp_to_ENSMUST00000116636,uc008eyj.1,uc008eyk.1_5end|description=CAGE_peak_3_at_Gramd3_5end|id=chr18:56559971..56560016,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.58e-07,9;CL:0002251,4.58e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.48e-24!43;UBERON:0005409!5.35e-22!59;UBERON:0004119!6.43e-22!130;UBERON:0000925!6.43e-22!130;UBERON:0006595!6.43e-22!130;UBERON:0001007!9.66e-22!128;UBERON:0001555!9.66e-22!128;UBERON:0007026!9.66e-22!128;UBERON:0004921!2.39e-20!126;UBERON:0004185!2.39e-20!126;UBERON:0009854!2.99e-10!23;UBERON:0009856!2.99e-10!23;UBERON:0000344!3.58e-10!15;UBERON:0005177!7.05e-10!85;UBERON:0002107!1.24e-09!22;UBERON:0007499!1.24e-09!22;UBERON:0006925!1.24e-09!22;UBERON:0009497!1.24e-09!22;UBERON:0000015!1.24e-09!22;UBERON:0002423!1.24e-09!22;UBERON:0006235!1.24e-09!22;UBERON:0008835!1.24e-09!22;UBERON:0003894!1.24e-09!22;UBERON:0004161!1.24e-09!22;UBERON:0008836!1.24e-09!22;UBERON:0002108!4.38e-09!16;UBERON:0001242!9.73e-09!13;UBERON:0000060!9.73e-09!13;UBERON:0001262!9.73e-09!13;UBERON:0004786!9.73e-09!13;UBERON:0005172!2.75e-08!49;UBERON:0005173!2.75e-08!49;UBERON:0002417!2.75e-08!49;UBERON:0000916!2.75e-08!49;UBERON:0002365!2.87e-07!25;UBERON:0002330!2.87e-07!25;UBERON:0009569!3.05e-07!66;UBERON:0001045!3.19e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.71e-22,31;UBERON:0005409,1.32e-19,47;UBERON:0001007,2.10e-13,116;UBERON:0001555,2.10e-13,116;UBERON:0007026,2.10e-13,116;UBERON:0004119,8.91e-13,118;UBERON:0000925,8.91e-13,118;UBERON:0006595,8.91e-13,118;UBERON:0004921,3.50e-12,114;UBERON:0009854,4.93e-12,23;UBERON:0009856,4.93e-12,23;UBERON:0000344,6.12e-12,15;UBERON:0002107,2.73e-11,22;UBERON:0007499,2.73e-11,22;UBERON:0006925,2.73e-11,22;UBERON:0009497,2.73e-11,22;UBERON:0000015,2.73e-11,22;UBERON:0002423,2.73e-11,22;UBERON:0006235,2.73e-11,22;UBERON:0008835,2.73e-11,22;UBERON:0003894,2.73e-11,22;UBERON:0004161,2.73e-11,22;UBERON:0008836,2.73e-11,22;UBERON:0001242,3.26e-10,13;UBERON:0001262,3.26e-10,13;UBERON:0004786,3.26e-10,13;UBERON:0002365,5.38e-09,25;UBERON:0002330,5.38e-09,25;UBERON:0005177,6.91e-09,79;UBERON:0005172,1.12e-08,49;UBERON:0005173,1.12e-08,49;UBERON:0002417,1.12e-08,49;UBERON:0000916,1.12e-08,49;UBERON:0001264,1.20e-07,12;UBERON:0003350,4.58e-07,9;UBERON:0004808,4.58e-07,9;UBERON:0001277,4.58e-07,9;UBERON:0002100,7.62e-07,90|phase1_expression=0,184.607990641222,149.239750519768,263.748792259556,262.469362491886,52.8819706522453,60.0384486330501,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,150.552869848596,158.06299465528,133.7960476388,122.336406909177,118.078235511867,129.595972069247,99.2998711254127,60.7541599195535,0,0,0,5.77703239502549,12.8000676926039,10.0042984568561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,3.76823835312181,33.5565312022741,14.9593693415705,40.4777393728363,68.8763002494529,80.6448396775204,26.2631065646376,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,45.3310002484668,0.258937883647172,0.148442139064825,0.173485326766136,3.34912026143355,2.7673859670727,1.50722640552623,0.587943535678524,1.0053327306374,2.47194967734374,0.144599356919912,0.884610551949874,0,0,0,83.876292548155,0.292780797011547,0,149.186920241817,0,0,0,0.149790639404823,0,0,0.695297280769106,0.255715457330331,0,0.162241263067758,0.203678727700633,2.48813941220186,11.625246887949,0,0,0,0,1.20563854268572,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.536825675041487,0,0,442.430750415306,127.994074265155,1.06644125267617,1.62565670302307,14.1754207454303,46.3872106633688,56.4840231365971,82.7481473589632,156.594590309689,82.0200794525574,80.4272668160862,77.9909370401311,67.2626100560964,133.924091889479,175.720234548126,167.876093353432,1.70701110857774,1.48523066392647,1.1270773567308,1.62921062276251,2.90928730751439,2.52488951605147,3.60448261608267,13.8753539100826,17.8978549739167,16.7820142933649,66.9982937216956,2.16898637430922,3.53806191203765,5.62155280962134,6.49152388443209,12.7823894668781,23.680204215672,44.8805974423265,6.16113861745134,19.7684217495419,20.1275489138296,44.2847727725519,26.8352398878522,43.4435670069032,57.5865697405338,72.8489717258684,1.66277871149944,0.37898282354097,0.325929952884052,0,0.234690248288502,0.167506257441816,0.476087281772027,0,0.472905432318573,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.709700426041343,0.890328018336276,0.325773918707152,3.13443233647817,43.8058956521877,10.9251286269742,19.9533547596736,26.5933162455816,26.2818684663888,25.8245524272899,32.8203932323641,24.3567598749929,22.8158322166222,13.9056173491759,36.8965130012496,51.5677716240934,0.680879211507576,0.36012218806262,0.517434735131018,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.63549621259146,6.17479514553893,0,0,0,0,0.164140899745061,117.1752963252,0.18542530201051,0,0.82554747185289,0,0,0,0,0,0,0,47.7335309007557,0,6.09958401380546,11.2325554454673,5.22720740036172,12.0099410060398,7.95699643670442,10.579642332843,24.0815466625307,66.4924812986897,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0.25984164595559,0.537080087002444,0.198681354781265,0.721172697119813,0,0.504832249740738,0.304827226619999,0.201652370273681,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,1.9318959403219,7.13193406714492,2.74727436400898,2.35805216986972,2.00628841614145,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,3.64660075602441,1.46729213839588,4.77993121970037,10.2233494788743,8.85950746127245,11.5530915453053,7.07552192938633,9.37873409593887,6.41329560712659,8.80230170216895,8.06716920301353,8.95993315707567,8.09699275181225,5.2147946675185,8.29509647993932,7.00546031365621,9.71512872887022,8.9146005620208,6.38912902173615,6.91464950847231,8.86613141457204,7.9992973353031,7.69992931814256,6.95126296916536,6.05060336307039,9.50628796921032,7.85599180320834,7.3553711236988,7.19082721341613,5.72923460437565,6.97215785336847,7.9091710502268,0,10.7608539884888,6.23126056740065,0.191288332068843,0.220591419119515,0|short_description=p3@Gramd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107022 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QK68,uniprot:Q9D2W5,uniprot:Q6PEM6 | |||
|association_with_transcript=0bp_to_ENSMUST00000116636,uc008eyj.1,uc008eyk.1_5end | |||
|cluster_id=chr18:56559971..56560016,+ | |||
|description=CAGE_peak_3_at_Gramd3_5end | |||
|id=chr18:56559971..56560016,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.58e-07,9;CL:0002251,4.58e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.48e-24!43;UBERON:0005409!5.35e-22!59;UBERON:0004119!6.43e-22!130;UBERON:0000925!6.43e-22!130;UBERON:0006595!6.43e-22!130;UBERON:0001007!9.66e-22!128;UBERON:0001555!9.66e-22!128;UBERON:0007026!9.66e-22!128;UBERON:0004921!2.39e-20!126;UBERON:0004185!2.39e-20!126;UBERON:0009854!2.99e-10!23;UBERON:0009856!2.99e-10!23;UBERON:0000344!3.58e-10!15;UBERON:0005177!7.05e-10!85;UBERON:0002107!1.24e-09!22;UBERON:0007499!1.24e-09!22;UBERON:0006925!1.24e-09!22;UBERON:0009497!1.24e-09!22;UBERON:0000015!1.24e-09!22;UBERON:0002423!1.24e-09!22;UBERON:0006235!1.24e-09!22;UBERON:0008835!1.24e-09!22;UBERON:0003894!1.24e-09!22;UBERON:0004161!1.24e-09!22;UBERON:0008836!1.24e-09!22;UBERON:0002108!4.38e-09!16;UBERON:0001242!9.73e-09!13;UBERON:0000060!9.73e-09!13;UBERON:0001262!9.73e-09!13;UBERON:0004786!9.73e-09!13;UBERON:0005172!2.75e-08!49;UBERON:0005173!2.75e-08!49;UBERON:0002417!2.75e-08!49;UBERON:0000916!2.75e-08!49;UBERON:0002365!2.87e-07!25;UBERON:0002330!2.87e-07!25;UBERON:0009569!3.05e-07!66;UBERON:0001045!3.19e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.71e-22,31;UBERON:0005409,1.32e-19,47;UBERON:0001007,2.10e-13,116;UBERON:0001555,2.10e-13,116;UBERON:0007026,2.10e-13,116;UBERON:0004119,8.91e-13,118;UBERON:0000925,8.91e-13,118;UBERON:0006595,8.91e-13,118;UBERON:0004921,3.50e-12,114;UBERON:0009854,4.93e-12,23;UBERON:0009856,4.93e-12,23;UBERON:0000344,6.12e-12,15;UBERON:0002107,2.73e-11,22;UBERON:0007499,2.73e-11,22;UBERON:0006925,2.73e-11,22;UBERON:0009497,2.73e-11,22;UBERON:0000015,2.73e-11,22;UBERON:0002423,2.73e-11,22;UBERON:0006235,2.73e-11,22;UBERON:0008835,2.73e-11,22;UBERON:0003894,2.73e-11,22;UBERON:0004161,2.73e-11,22;UBERON:0008836,2.73e-11,22;UBERON:0001242,3.26e-10,13;UBERON:0001262,3.26e-10,13;UBERON:0004786,3.26e-10,13;UBERON:0002365,5.38e-09,25;UBERON:0002330,5.38e-09,25;UBERON:0005177,6.91e-09,79;UBERON:0005172,1.12e-08,49;UBERON:0005173,1.12e-08,49;UBERON:0002417,1.12e-08,49;UBERON:0000916,1.12e-08,49;UBERON:0001264,1.20e-07,12;UBERON:0003350,4.58e-07,9;UBERON:0004808,4.58e-07,9;UBERON:0001277,4.58e-07,9;UBERON:0002100,7.62e-07,90 | |||
|phase1_expression=0,184.607990641222,149.239750519768,263.748792259556,262.469362491886,52.8819706522453,60.0384486330501,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,150.552869848596,158.06299465528,133.7960476388,122.336406909177,118.078235511867,129.595972069247,99.2998711254127,60.7541599195535,0,0,0,5.77703239502549,12.8000676926039,10.0042984568561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,3.76823835312181,33.5565312022741,14.9593693415705,40.4777393728363,68.8763002494529,80.6448396775204,26.2631065646376,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,45.3310002484668,0.258937883647172,0.148442139064825,0.173485326766136,3.34912026143355,2.7673859670727,1.50722640552623,0.587943535678524,1.0053327306374,2.47194967734374,0.144599356919912,0.884610551949874,0,0,0,83.876292548155,0.292780797011547,0,149.186920241817,0,0,0,0.149790639404823,0,0,0.695297280769106,0.255715457330331,0,0.162241263067758,0.203678727700633,2.48813941220186,11.625246887949,0,0,0,0,1.20563854268572,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.536825675041487,0,0,442.430750415306,127.994074265155,1.06644125267617,1.62565670302307,14.1754207454303,46.3872106633688,56.4840231365971,82.7481473589632,156.594590309689,82.0200794525574,80.4272668160862,77.9909370401311,67.2626100560964,133.924091889479,175.720234548126,167.876093353432,1.70701110857774,1.48523066392647,1.1270773567308,1.62921062276251,2.90928730751439,2.52488951605147,3.60448261608267,13.8753539100826,17.8978549739167,16.7820142933649,66.9982937216956,2.16898637430922,3.53806191203765,5.62155280962134,6.49152388443209,12.7823894668781,23.680204215672,44.8805974423265,6.16113861745134,19.7684217495419,20.1275489138296,44.2847727725519,26.8352398878522,43.4435670069032,57.5865697405338,72.8489717258684,1.66277871149944,0.37898282354097,0.325929952884052,0,0.234690248288502,0.167506257441816,0.476087281772027,0,0.472905432318573,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.709700426041343,0.890328018336276,0.325773918707152,3.13443233647817,43.8058956521877,10.9251286269742,19.9533547596736,26.5933162455816,26.2818684663888,25.8245524272899,32.8203932323641,24.3567598749929,22.8158322166222,13.9056173491759,36.8965130012496,51.5677716240934,0.680879211507576,0.36012218806262,0.517434735131018,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.63549621259146,6.17479514553893,0,0,0,0,0.164140899745061,117.1752963252,0.18542530201051,0,0.82554747185289,0,0,0,0,0,0,0,47.7335309007557,0,6.09958401380546,11.2325554454673,5.22720740036172,12.0099410060398,7.95699643670442,10.579642332843,24.0815466625307,66.4924812986897,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0.25984164595559,0.537080087002444,0.198681354781265,0.721172697119813,0,0.504832249740738,0.304827226619999,0.201652370273681,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,1.9318959403219,7.13193406714492,2.74727436400898,2.35805216986972,2.00628841614145,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,3.64660075602441,1.46729213839588,4.77993121970037,10.2233494788743,8.85950746127245,11.5530915453053,7.07552192938633,9.37873409593887,6.41329560712659,8.80230170216895,8.06716920301353,8.95993315707567,8.09699275181225,5.2147946675185,8.29509647993932,7.00546031365621,9.71512872887022,8.9146005620208,6.38912902173615,6.91464950847231,8.86613141457204,7.9992973353031,7.69992931814256,6.95126296916536,6.05060336307039,9.50628796921032,7.85599180320834,7.3553711236988,7.19082721341613,5.72923460437565,6.97215785336847,7.9091710502268,0,10.7608539884888,6.23126056740065,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Gramd3 | |||
}} |
Revision as of 21:34, 5 August 2015
Short description: | p3@Gramd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gramd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000116636, uc008eyj.1, uc008eyk.1_5end |
EntrezGene: | 107022 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.58e-07 | 9 |
epithelial cell of alimentary canal | 4.58e-07 | 9 |