FFCP PHASE1:Mm9::chr8:112523147..112523161,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:112523147..112523161,+
|short_description=p@chr8:112523147..112523161,+
|description=CAGE_peak_at_chr8:112523147..112523161,+
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=62 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:112523147..112523161,+ | |||
|description=CAGE_peak_at_chr8:112523147..112523161,+ | |||
|id=chr8:112523147..112523161,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.39e-18!5;CL:0000417!1.39e-18!5;CL:0000668!1.39e-18!5;CL:0000412!1.39e-18!5;CL:0000182!1.39e-18!5;CL:0000414!1.46e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.57e-35,5;CL:0000223,4.20e-09,20;CL:0000066,2.36e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.06e-35!22;UBERON:0007499!4.06e-35!22;UBERON:0006925!4.06e-35!22;UBERON:0009497!4.06e-35!22;UBERON:0000015!4.06e-35!22;UBERON:0002423!4.06e-35!22;UBERON:0006235!4.06e-35!22;UBERON:0008835!4.06e-35!22;UBERON:0003894!4.06e-35!22;UBERON:0004161!4.06e-35!22;UBERON:0008836!4.06e-35!22;UBERON:0009854!1.57e-33!23;UBERON:0009856!1.57e-33!23;UBERON:0002365!9.77e-31!25;UBERON:0002330!9.77e-31!25;UBERON:0003914!2.06e-18!47;UBERON:0005256!2.06e-18!47;UBERON:0005172!1.36e-17!49;UBERON:0005173!1.36e-17!49;UBERON:0002417!1.36e-17!49;UBERON:0000916!1.36e-17!49;UBERON:0005057!2.67e-14!51;UBERON:0003929!3.82e-13!55;UBERON:0009569!1.26e-12!66;UBERON:0002368!6.48e-12!60;UBERON:0002530!7.14e-11!65;UBERON:0000490!1.10e-10!66;UBERON:0000466!2.92e-10!79;UBERON:0005911!3.80e-10!69;UBERON:0002405!5.60e-10!70;UBERON:0000949!1.18e-09!72;UBERON:0005177!2.07e-09!85;UBERON:0001041!1.51e-08!92;UBERON:0000077!5.17e-08!97;UBERON:0002100!6.41e-08!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.86e-24,22;UBERON:0007499,2.86e-24,22;UBERON:0006925,2.86e-24,22;UBERON:0009497,2.86e-24,22;UBERON:0000015,2.86e-24,22;UBERON:0002423,2.86e-24,22;UBERON:0006235,2.86e-24,22;UBERON:0008835,2.86e-24,22;UBERON:0003894,2.86e-24,22;UBERON:0004161,2.86e-24,22;UBERON:0008836,2.86e-24,22;UBERON:0009854,3.19e-23,23;UBERON:0009856,3.19e-23,23;UBERON:0002365,2.24e-21,25;UBERON:0002330,2.24e-21,25;UBERON:0005256,6.70e-12,45;UBERON:0003914,2.15e-11,47;UBERON:0005172,6.30e-11,49;UBERON:0005173,6.30e-11,49;UBERON:0002417,6.30e-11,49;UBERON:0000916,6.30e-11,49;UBERON:0003929,9.94e-10,55;UBERON:0002368,6.53e-09,60;UBERON:0003104,9.17e-09,61;UBERON:0009142,9.17e-09,61;UBERON:0002530,3.22e-08,65;UBERON:0000490,4.31e-08,66;UBERON:0009569,4.31e-08,66;UBERON:0005911,9.82e-08,69;UBERON:0000949,2.09e-07,72;UBERON:0005177,9.79e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,2.69851595818909,2.59910566979068,4.03224198387602,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0,0,0,0,0,0,0,22.86106697528,0.823684239564244,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,8.20153986317724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,2.69851595818909,2.59910566979068,4.03224198387602,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0,0,0,0,0,0,0,22.86106697528,0.823684239564244,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,8.20153986317724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:112523147..112523161,+ | |||
}} | }} |
Latest revision as of 21:57, 5 August 2015
Short description: | p@chr8:112523147..112523161, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:112523147..112523161, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.57e-35 | 5 |
endodermal cell | 4.20e-09 | 20 |
epithelial cell | 2.36e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 2.86e-24 | 22 |
epithelial sac | 2.86e-24 | 22 |
digestive gland | 2.86e-24 | 22 |
epithelium of foregut-midgut junction | 2.86e-24 | 22 |
anatomical boundary | 2.86e-24 | 22 |
hepatobiliary system | 2.86e-24 | 22 |
foregut-midgut junction | 2.86e-24 | 22 |
hepatic diverticulum | 2.86e-24 | 22 |
liver primordium | 2.86e-24 | 22 |
septum transversum | 2.86e-24 | 22 |
liver bud | 2.86e-24 | 22 |
digestive tract diverticulum | 3.19e-23 | 23 |
sac | 3.19e-23 | 23 |
exocrine gland | 2.24e-21 | 25 |
exocrine system | 2.24e-21 | 25 |
trunk mesenchyme | 6.70e-12 | 45 |
epithelial tube | 2.15e-11 | 47 |
abdomen element | 6.30e-11 | 49 |
abdominal segment element | 6.30e-11 | 49 |
abdominal segment of trunk | 6.30e-11 | 49 |
abdomen | 6.30e-11 | 49 |
gut epithelium | 9.94e-10 | 55 |
endocrine gland | 6.53e-09 | 60 |
mesenchyme | 9.17e-09 | 61 |
entire embryonic mesenchyme | 9.17e-09 | 61 |
gland | 3.22e-08 | 65 |
unilaminar epithelium | 4.31e-08 | 66 |
subdivision of trunk | 4.31e-08 | 66 |
endo-epithelium | 9.82e-08 | 69 |
endocrine system | 2.09e-07 | 72 |
trunk region element | 9.79e-07 | 79 |