FFCP PHASE1:Mm9::chr3:121152598..121152612,+: Difference between revisions
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|id=chr3:121152598..121152612,+
|short_description=p@chr3:121152598..121152612,+
|description=CAGE_peak_at_chr3:121152598..121152612,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:121152598..121152612,+ | |||
|description=CAGE_peak_at_chr3:121152598..121152612,+ | |||
|id=chr3:121152598..121152612,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.97e-14,3;CL:0000737,2.97e-14,3;CL:0000746,2.97e-14,3;CL:0000513,2.97e-14,3;CL:0000680,2.28e-07,6;CL:0000187,2.28e-07,6;CL:0000056,2.28e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003064!2.49e-13!14;UBERON:0002369!7.61e-13!7;UBERON:0006858!7.61e-13!7;UBERON:0002342!1.61e-08!10;UBERON:0005062!1.61e-08!10;UBERON:0003975!2.62e-08!5;UBERON:0004175!3.79e-08!9;UBERON:0005795!3.25e-07!4;UBERON:0000995!3.25e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.66e-32,7;UBERON:0006858,6.66e-32,7;UBERON:0003064,5.69e-20,14;UBERON:0005631,1.96e-14,3;UBERON:0000478,1.96e-14,3;UBERON:0000158,1.96e-14,3;UBERON:0005256,1.20e-12,45;UBERON:0005795,1.27e-10,4;UBERON:0000995,1.27e-10,4;UBERON:0001987,6.34e-10,2;UBERON:0003124,6.34e-10,2;UBERON:0004340,6.34e-10,2;UBERON:0003104,8.18e-09,61;UBERON:0009142,8.18e-09,61;UBERON:0003975,1.35e-08,5;UBERON:0004175,5.71e-08,9;UBERON:0000926,4.00e-07,120;UBERON:0004120,4.00e-07,120;UBERON:0006603,4.00e-07,120 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,2.29692785646008,1.29228598847722,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63066984864705,2.57880095944881,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,2.03991400112325,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,5.34391700633369,1.90833859442749,6.69824052286711,10.8389283710347,11.6056433225519,4.9387256996996,2.89033160058254,11.3709685157812,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,3.81297727554876,0,0.32977250588296,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.386379188064381,2.43987218086537,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,2.29692785646008,1.29228598847722,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63066984864705,2.57880095944881,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,2.03991400112325,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,5.34391700633369,1.90833859442749,6.69824052286711,10.8389283710347,11.6056433225519,4.9387256996996,2.89033160058254,11.3709685157812,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,3.81297727554876,0,0.32977250588296,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.386379188064381,2.43987218086537,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p@chr3:121152598..121152612,+ | |||
}} | }} |
Latest revision as of 22:59, 5 August 2015
Short description: | p@chr3:121152598..121152612, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:121152598..121152612, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.97e-14 | 3 |
striated muscle cell | 2.97e-14 | 3 |
cardiac muscle cell | 2.97e-14 | 3 |
cardiac muscle myoblast | 2.97e-14 | 3 |
muscle precursor cell | 2.28e-07 | 6 |
muscle cell | 2.28e-07 | 6 |
myoblast | 2.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.66e-32 | 7 |
adrenal/interrenal gland | 6.66e-32 | 7 |
intermediate mesoderm | 5.69e-20 | 14 |
extraembryonic membrane | 1.96e-14 | 3 |
extraembryonic structure | 1.96e-14 | 3 |
membranous layer | 1.96e-14 | 3 |
trunk mesenchyme | 1.20e-12 | 45 |
embryonic uterus | 1.27e-10 | 4 |
uterus | 1.27e-10 | 4 |
placenta | 6.34e-10 | 2 |
chorion | 6.34e-10 | 2 |
allantois | 6.34e-10 | 2 |
mesenchyme | 8.18e-09 | 61 |
entire embryonic mesenchyme | 8.18e-09 | 61 |
internal female genitalia | 1.35e-08 | 5 |
internal genitalia | 5.71e-08 | 9 |
mesoderm | 4.00e-07 | 120 |
mesoderm-derived structure | 4.00e-07 | 120 |
presumptive mesoderm | 4.00e-07 | 120 |