FFCP PHASE1:Mm9::chr3:122122657..122122672,+: Difference between revisions
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{{FFCP|EntrezGene=29815|HGNC=|MCL_coexpression_id=24|UniProt=Q9QZK2|association_with_transcript=-25bp_to_ENSMUST00000029766,NM_013867,uc008req.2_5end|description=CAGE_peak_3_at_Bcar3_5end|id=chr3:122122657..122122672,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.18e-07,6;CL:0000677,7.18e-07,6;CL:0000584,7.18e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.49e-09!43;UBERON:0004119!1.52e-08!130;UBERON:0000925!1.52e-08!130;UBERON:0006595!1.52e-08!130;UBERON:0001007!6.26e-08!128;UBERON:0001555!6.26e-08!128;UBERON:0007026!6.26e-08!128;UBERON:0004921!3.07e-07!126;UBERON:0004185!3.07e-07!126;UBERON:0000344!4.52e-07!15;UBERON:0005409!5.20e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-15,31;UBERON:0004119,8.68e-13,118;UBERON:0000925,8.68e-13,118;UBERON:0006595,8.68e-13,118;UBERON:0001007,7.61e-12,116;UBERON:0001555,7.61e-12,116;UBERON:0007026,7.61e-12,116;UBERON:0004921,8.85e-11,114;UBERON:0000344,1.02e-09,15;UBERON:0001242,3.16e-08,13;UBERON:0001262,3.16e-08,13;UBERON:0004786,3.16e-08,13;UBERON:0005409,4.53e-08,47;UBERON:0004923,4.55e-08,24;UBERON:0002107,7.20e-08,22;UBERON:0007499,7.20e-08,22;UBERON:0006925,7.20e-08,22;UBERON:0009497,7.20e-08,22;UBERON:0000015,7.20e-08,22;UBERON:0002423,7.20e-08,22;UBERON:0006235,7.20e-08,22;UBERON:0008835,7.20e-08,22;UBERON:0003894,7.20e-08,22;UBERON:0004161,7.20e-08,22;UBERON:0008836,7.20e-08,22;UBERON:0009854,2.72e-07,23;UBERON:0009856,2.72e-07,23|phase1_expression=0.160148847104794,19.1936474201649,17.2899710968024,25.7094579610806,39.0698669358151,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,1.10411757875383,2.60517423850904,0.42438965179803,0.680346321208558,0,0,2.55987876469451,4.5881856213434,12.0588712464154,9.47676391549965,7.32602191132023,6.08074942260396,6.04872311423834,4.21287970245079,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,2.51118978442145,1.5626706890476,1.0470474879476,0.588231488031014,0,1.45653105909346,0.503587271902309,0.304130793658544,0.550640256485045,0,3.48840250208714,1.75748946187577,4.27745777963423,0.839918529752175,0,1.8456086666351,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0,0.988866362566974,0,0.299600110518405,1.92109152660777,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.768032666281217,0.395658863190582,0.365950574409639,1.56274011167028,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0,1.06016670666458,0.604572480854284,0.869593466105033,1.72084775396277,0.679971333707751,3.77792234146472,2.59910566979068,3.13618820968135,1.12355536105401,0.340860645156116,0.519572009205738,0.70667914902068,0.704217098883403,0,0,0,1.08245520505607,1.52015919285059,2.02209778005913,2.51204535381932,0.517875767294343,1.7813056687779,0.693941307064543,0,0.230615497256059,0.60289056221049,0.940709657085638,2.76466500925286,5.6854842578906,0.578397427679647,0,2.10296904931632,0.883366073841574,0.969750506270444,0,0,1.04723353406728,3.0654846625031,0,0,0,0.748953197024114,0,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,0,0.611036183101898,0.622034853050465,0,1.26265113531884,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.12811372028485,1.3118241438362,1.55222022443409,0.862271971731369,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.697601834251224,0.536546802799238,0.467061369468678,0,0.164167464079095,0.486412857275134,0.584799949701329,0.439100230582101,0.939444931322602,0.630869845692382,0.102904612379284,4.95628174475697,5.28901133327089,0.639864751605702,0.928946687441754,0.644337306610467,1.81515172161008,2.00140239460383,3.61428689613862,4.2707615539006,3.45867804920423,5.52937459360593,4.57599885694647,4.48417400373976,7.19055526923377,5.40345124686736,2.58883655230677,0,0.456994050438915,0,0,1.16371492300575,0.701358198903186,0.505892296994058,0.147610147979602,1.72698600625512,1.60416313098341,2.37162101669719,0,0.393117990226406,1.34917267430912,1.21716072833102,1.92941727801933,1.78238096246994,1.43848068725405,1.29708181420028,1.92192989231657,1.43768206527355,1.86070473834252,2.18426371180192,3.53610429125956,3.58794827043824,3.85954817090694,2.03228509183265,0.568474235311454,0.162964976442026,0.339490171550376,0.704070744865506,2.01007508930179,1.6663054862021,4.29294025287157,1.26108115284953,1.10732344824387,3.18909537314974,1.63863314715738,2.07221978239075,2.60368305446721,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0.655739781506702,0.757412781613119,1.26203287766503,2.34263246577983,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,1.619242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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:29815 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZK2 | |||
|association_with_transcript=-25bp_to_ENSMUST00000029766,NM_013867,uc008req.2_5end | |||
|cluster_id=chr3:122122657..122122672,+ | |||
|description=CAGE_peak_3_at_Bcar3_5end | |||
|id=chr3:122122657..122122672,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.18e-07,6;CL:0000677,7.18e-07,6;CL:0000584,7.18e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.49e-09!43;UBERON:0004119!1.52e-08!130;UBERON:0000925!1.52e-08!130;UBERON:0006595!1.52e-08!130;UBERON:0001007!6.26e-08!128;UBERON:0001555!6.26e-08!128;UBERON:0007026!6.26e-08!128;UBERON:0004921!3.07e-07!126;UBERON:0004185!3.07e-07!126;UBERON:0000344!4.52e-07!15;UBERON:0005409!5.20e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-15,31;UBERON:0004119,8.68e-13,118;UBERON:0000925,8.68e-13,118;UBERON:0006595,8.68e-13,118;UBERON:0001007,7.61e-12,116;UBERON:0001555,7.61e-12,116;UBERON:0007026,7.61e-12,116;UBERON:0004921,8.85e-11,114;UBERON:0000344,1.02e-09,15;UBERON:0001242,3.16e-08,13;UBERON:0001262,3.16e-08,13;UBERON:0004786,3.16e-08,13;UBERON:0005409,4.53e-08,47;UBERON:0004923,4.55e-08,24;UBERON:0002107,7.20e-08,22;UBERON:0007499,7.20e-08,22;UBERON:0006925,7.20e-08,22;UBERON:0009497,7.20e-08,22;UBERON:0000015,7.20e-08,22;UBERON:0002423,7.20e-08,22;UBERON:0006235,7.20e-08,22;UBERON:0008835,7.20e-08,22;UBERON:0003894,7.20e-08,22;UBERON:0004161,7.20e-08,22;UBERON:0008836,7.20e-08,22;UBERON:0009854,2.72e-07,23;UBERON:0009856,2.72e-07,23 | |||
|phase1_expression=0.160148847104794,19.1936474201649,17.2899710968024,25.7094579610806,39.0698669358151,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,1.10411757875383,2.60517423850904,0.42438965179803,0.680346321208558,0,0,2.55987876469451,4.5881856213434,12.0588712464154,9.47676391549965,7.32602191132023,6.08074942260396,6.04872311423834,4.21287970245079,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,2.51118978442145,1.5626706890476,1.0470474879476,0.588231488031014,0,1.45653105909346,0.503587271902309,0.304130793658544,0.550640256485045,0,3.48840250208714,1.75748946187577,4.27745777963423,0.839918529752175,0,1.8456086666351,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0,0.988866362566974,0,0.299600110518405,1.92109152660777,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.768032666281217,0.395658863190582,0.365950574409639,1.56274011167028,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0,1.06016670666458,0.604572480854284,0.869593466105033,1.72084775396277,0.679971333707751,3.77792234146472,2.59910566979068,3.13618820968135,1.12355536105401,0.340860645156116,0.519572009205738,0.70667914902068,0.704217098883403,0,0,0,1.08245520505607,1.52015919285059,2.02209778005913,2.51204535381932,0.517875767294343,1.7813056687779,0.693941307064543,0,0.230615497256059,0.60289056221049,0.940709657085638,2.76466500925286,5.6854842578906,0.578397427679647,0,2.10296904931632,0.883366073841574,0.969750506270444,0,0,1.04723353406728,3.0654846625031,0,0,0,0.748953197024114,0,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,0,0.611036183101898,0.622034853050465,0,1.26265113531884,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.12811372028485,1.3118241438362,1.55222022443409,0.862271971731369,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.697601834251224,0.536546802799238,0.467061369468678,0,0.164167464079095,0.486412857275134,0.584799949701329,0.439100230582101,0.939444931322602,0.630869845692382,0.102904612379284,4.95628174475697,5.28901133327089,0.639864751605702,0.928946687441754,0.644337306610467,1.81515172161008,2.00140239460383,3.61428689613862,4.2707615539006,3.45867804920423,5.52937459360593,4.57599885694647,4.48417400373976,7.19055526923377,5.40345124686736,2.58883655230677,0,0.456994050438915,0,0,1.16371492300575,0.701358198903186,0.505892296994058,0.147610147979602,1.72698600625512,1.60416313098341,2.37162101669719,0,0.393117990226406,1.34917267430912,1.21716072833102,1.92941727801933,1.78238096246994,1.43848068725405,1.29708181420028,1.92192989231657,1.43768206527355,1.86070473834252,2.18426371180192,3.53610429125956,3.58794827043824,3.85954817090694,2.03228509183265,0.568474235311454,0.162964976442026,0.339490171550376,0.704070744865506,2.01007508930179,1.6663054862021,4.29294025287157,1.26108115284953,1.10732344824387,3.18909537314974,1.63863314715738,2.07221978239075,2.60368305446721,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.586058432961016,0.655739781506702,0.757412781613119,1.26203287766503,2.34263246577983,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,1.61924280669958,1.16902343164525,0.790575555893047,0.321321316421807,1.98716119291576,0.712262414669021,1.79175655288934,0.824850614862677,0,0.242780636154981,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,2.06271086496374,2.04263763452273,0.900305470156551,0.646793418913773,0.428674070063185,0.886701168211368,0.891844088010353,1.15184314421485,0.304464949114599,1.40803024838226,4.66030555900404,1.54369878638473,0.32977250588296,0.645857706783622,1.93001359770099,1.55184047204077,1.14898629821543,4.37221254944776,0.370850604021019,0.341741761595705,1.03193433981611,0.370389054739423,0.188368457004691,0.27338845544205,0.457556346413045,0.849892149969277,0.419854356970974,0.138199973804424,0.954670618015114,0.632671987162271,0.609958401380546,1.08005340821801,0.209088296014469,0.87345025498471,0.539457385539283,0.41326727862668,0.785267825952089,0.90730481304255,0.621339313086926,0,1.19613236835183,1.15820943319968,0.388902376688095,0.774958940866387,0.506868376472335,0.469428954583016,0.39061315453185,1.25831213310853,0.241584120826006,0.288030006257865,0,0.608175645870493,0.718976700153791,0.25984164595559,0.716106782669926,0,0.240390899039938,0.590758108698309,0.201932899896295,0,0,0.292373642219257,0.192423683280659,0.350630706544707,0.453460767230423,1.99787358036658,0.0897138566094757,1.17519231454855,0.579568782096571,0.187682475451182,0.183151624267265,0.857473516316263,1.504716312106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| |||
|short_description=p3@Bcar3 | |||
}} |
Revision as of 23:19, 5 August 2015
Short description: | p3@Bcar3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bcar3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -25bp_to_ENSMUST00000029766, NM_013867, uc008req.2_5end |
EntrezGene: | 29815 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.18e-07 | 6 |
gut absorptive cell | 7.18e-07 | 6 |
enterocyte | 7.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.13e-15 | 31 |
endoderm-derived structure | 8.68e-13 | 118 |
endoderm | 8.68e-13 | 118 |
presumptive endoderm | 8.68e-13 | 118 |
digestive system | 7.61e-12 | 116 |
digestive tract | 7.61e-12 | 116 |
primitive gut | 7.61e-12 | 116 |
subdivision of digestive tract | 8.85e-11 | 114 |
mucosa | 1.02e-09 | 15 |
intestinal mucosa | 3.16e-08 | 13 |
wall of intestine | 3.16e-08 | 13 |
gastrointestinal system mucosa | 3.16e-08 | 13 |
gastrointestinal system | 4.53e-08 | 47 |
organ component layer | 4.55e-08 | 24 |
liver | 7.20e-08 | 22 |
epithelial sac | 7.20e-08 | 22 |
digestive gland | 7.20e-08 | 22 |
epithelium of foregut-midgut junction | 7.20e-08 | 22 |
anatomical boundary | 7.20e-08 | 22 |
hepatobiliary system | 7.20e-08 | 22 |
foregut-midgut junction | 7.20e-08 | 22 |
hepatic diverticulum | 7.20e-08 | 22 |
liver primordium | 7.20e-08 | 22 |
septum transversum | 7.20e-08 | 22 |
liver bud | 7.20e-08 | 22 |
digestive tract diverticulum | 2.72e-07 | 23 |
sac | 2.72e-07 | 23 |