FFCP PHASE1:Mm9::chr3:126314780..126314810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:126314780..126314810,- | |||
|description=CAGE_peak_at_chr3:126314780..126314810,- | |description=CAGE_peak_at_chr3:126314780..126314810,- | ||
|id=chr3:126314780..126314810,- | |id=chr3:126314780..126314810,- | ||
|ontology_enrichment_celltype=CL:0002563!5.97e-23!9;CL:0002251!5.97e-23!9;CL:0000066!7.45e-17!25;CL:0000239!1.48e-13!6;CL:0000677!1.48e-13!6;CL:0000212!1.48e-13!6;CL:0000584!1.48e-13!6;CL:0002076!3.02e-13!15;CL:0000223!4.29e-12!20;CL:0000075!1.41e-11!7;CL:0002250!2.91e-11!3;CL:0000473!2.32e-10!3;CL:0000627!2.32e-10!3;CL:0000682!2.32e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.90e-53,3;CL:0002563,1.47e-48,9;CL:0002251,1.47e-48,9;CL:0002076,1.68e-29,15;CL:0000223,2.48e-22,20;CL:0000066,5.10e-18,25;CL:0000239,1.84e-12,6;CL:0000677,1.84e-12,6;CL:0000584,1.84e-12,6;CL:0000075,7.87e-11,7;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.97e-23!9;UBERON:0004808!5.97e-23!9;UBERON:0001277!5.97e-23!9;UBERON:0000485!1.53e-18!11;UBERON:0000160!4.20e-18!43;UBERON:0005409!1.37e-15!59;UBERON:0001242!1.73e-15!13;UBERON:0000060!1.73e-15!13;UBERON:0001262!1.73e-15!13;UBERON:0004786!1.73e-15!13;UBERON:0000344!3.02e-13!15;UBERON:0004923!8.73e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.47e-48,9;UBERON:0004808,1.47e-48,9;UBERON:0001277,1.47e-48,9;UBERON:0000485,6.64e-40,11;UBERON:0001242,6.63e-34,13;UBERON:0001262,6.63e-34,13;UBERON:0004786,6.63e-34,13;UBERON:0000344,1.68e-29,15;UBERON:0004923,9.72e-19,24;UBERON:0000160,1.14e-14,31;UBERON:0005409,6.83e-10,47;UBERON:0003929,1.55e-08,55;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0.697950815278722,0,1.20985684522732,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,11.2652131702997,2.65975432573588,9.39179038806898,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0,1.20985684522732,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,11.2652131702997,2.65975432573588,9.39179038806898,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:126314780..126314810,- | |short_description=p@chr3:126314780..126314810,- | ||
}} | }} |
Latest revision as of 23:56, 5 August 2015
Short description: | p@chr3:126314780..126314810, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:126314780..126314810, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.90e-53 | 3 |
intestinal epithelial cell | 1.47e-48 | 9 |
epithelial cell of alimentary canal | 1.47e-48 | 9 |
endo-epithelial cell | 1.68e-29 | 15 |
endodermal cell | 2.48e-22 | 20 |
epithelial cell | 5.10e-18 | 25 |
brush border epithelial cell | 1.84e-12 | 6 |
gut absorptive cell | 1.84e-12 | 6 |
enterocyte | 1.84e-12 | 6 |
columnar/cuboidal epithelial cell | 7.87e-11 | 7 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.47e-48 | 9 |
gastrointestinal system epithelium | 1.47e-48 | 9 |
intestinal epithelium | 1.47e-48 | 9 |
simple columnar epithelium | 6.64e-40 | 11 |
intestinal mucosa | 6.63e-34 | 13 |
wall of intestine | 6.63e-34 | 13 |
gastrointestinal system mucosa | 6.63e-34 | 13 |
mucosa | 1.68e-29 | 15 |
organ component layer | 9.72e-19 | 24 |
intestine | 1.14e-14 | 31 |
gastrointestinal system | 6.83e-10 | 47 |
gut epithelium | 1.55e-08 | 55 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |