FFCP PHASE1:Mm9::chr1:74478918..74478947,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=140 | |MCL_coexpression_id=140 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:74478918..74478947,+ | |||
|description=CAGE_peak_at_chr1:74478918..74478947,+ | |description=CAGE_peak_at_chr1:74478918..74478947,+ | ||
|id=chr1:74478918..74478947,+ | |id=chr1:74478918..74478947,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.80e-12!9;CL:0002251!1.80e-12!9;CL:0000239!2.36e-11!6;CL:0000677!2.36e-11!6;CL:0000212!2.36e-11!6;CL:0000584!2.36e-11!6;CL:0000075!1.30e-09!7;CL:0002076!6.81e-07!15 | |ontology_enrichment_celltype=CL:0002563!1.80e-12!9;CL:0002251!1.80e-12!9;CL:0000239!2.36e-11!6;CL:0000677!2.36e-11!6;CL:0000212!2.36e-11!6;CL:0000584!2.36e-11!6;CL:0000075!1.30e-09!7;CL:0002076!6.81e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.94e-07,6;CL:0000677,1.94e-07,6;CL:0000584,1.94e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.01e-30!43;UBERON:0005409!1.76e-25!59;UBERON:0000344!3.94e-23!15;UBERON:0001242!1.60e-19!13;UBERON:0000060!1.60e-19!13;UBERON:0001262!1.60e-19!13;UBERON:0004786!1.60e-19!13;UBERON:0004923!4.56e-15!24;UBERON:0003350!1.80e-12!9;UBERON:0004808!1.80e-12!9;UBERON:0001277!1.80e-12!9;UBERON:0001007!8.31e-11!128;UBERON:0001555!8.31e-11!128;UBERON:0007026!8.31e-11!128;UBERON:0004119!1.66e-10!130;UBERON:0000925!1.66e-10!130;UBERON:0006595!1.66e-10!130;UBERON:0000485!6.26e-10!11;UBERON:0004921!3.11e-09!126;UBERON:0004185!3.11e-09!126;UBERON:0000331!9.60e-07!3;UBERON:0002116!9.60e-07!3;UBERON:0001204!9.60e-07!3;UBERON:0001168!9.60e-07!3 | |ontology_enrichment_uberon=UBERON:0000160!2.01e-30!43;UBERON:0005409!1.76e-25!59;UBERON:0000344!3.94e-23!15;UBERON:0001242!1.60e-19!13;UBERON:0000060!1.60e-19!13;UBERON:0001262!1.60e-19!13;UBERON:0004786!1.60e-19!13;UBERON:0004923!4.56e-15!24;UBERON:0003350!1.80e-12!9;UBERON:0004808!1.80e-12!9;UBERON:0001277!1.80e-12!9;UBERON:0001007!8.31e-11!128;UBERON:0001555!8.31e-11!128;UBERON:0007026!8.31e-11!128;UBERON:0004119!1.66e-10!130;UBERON:0000925!1.66e-10!130;UBERON:0006595!1.66e-10!130;UBERON:0000485!6.26e-10!11;UBERON:0004921!3.11e-09!126;UBERON:0004185!3.11e-09!126;UBERON:0000331!9.60e-07!3;UBERON:0002116!9.60e-07!3;UBERON:0001204!9.60e-07!3;UBERON:0001168!9.60e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.06e-37,31;UBERON:0005409,1.63e-23,47;UBERON:0000344,1.67e-14,15;UBERON:0001007,1.10e-10,116;UBERON:0001555,1.10e-10,116;UBERON:0007026,1.10e-10,116;UBERON:0004119,1.86e-10,118;UBERON:0000925,1.86e-10,118;UBERON:0006595,1.86e-10,118;UBERON:0001962,5.21e-10,2;UBERON:0001961,5.21e-10,2;UBERON:0001744,5.21e-10,2;UBERON:0001242,6.23e-09,13;UBERON:0001262,6.23e-09,13;UBERON:0004786,6.23e-09,13;UBERON:0004923,8.49e-09,24;UBERON:0004921,3.02e-08,114;UBERON:0002465,5.92e-07,3 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,1.81478526784098,2.50447864973174,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.14704640533585,0.57423196411502,0,0.646413698057667,3.04037471130198,0.756090389279792,0.665191531965914,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.380451252225118,12.8122846617018,1.4822905925161,1.00534083520108,1.1937388322469,1.55971269695296,8.08937467788799,6.70027954611552,3.38540164532424,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32738677215522,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,1.81478526784098,2.50447864973174,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.14704640533585,0.57423196411502,0,0.646413698057667,3.04037471130198,0.756090389279792,0.665191531965914,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.380451252225118,12.8122846617018,1.4822905925161,1.00534083520108,1.1937388322469,1.55971269695296,8.08937467788799,6.70027954611552,3.38540164532424,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32738677215522,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:74478918..74478947,+ | |short_description=p@chr1:74478918..74478947,+ | ||
}} | }} |
Latest revision as of 00:08, 6 August 2015
Short description: | p@chr1:74478918..74478947, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74478918..74478947, + |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.94e-07 | 6 |
gut absorptive cell | 1.94e-07 | 6 |
enterocyte | 1.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.06e-37 | 31 |
gastrointestinal system | 1.63e-23 | 47 |
mucosa | 1.67e-14 | 15 |
digestive system | 1.10e-10 | 116 |
digestive tract | 1.10e-10 | 116 |
primitive gut | 1.10e-10 | 116 |
endoderm-derived structure | 1.86e-10 | 118 |
endoderm | 1.86e-10 | 118 |
presumptive endoderm | 1.86e-10 | 118 |
gut-associated lymphoid tissue | 5.21e-10 | 2 |
mucosa-associated lymphoid tissue | 5.21e-10 | 2 |
lymphoid tissue | 5.21e-10 | 2 |
intestinal mucosa | 6.23e-09 | 13 |
wall of intestine | 6.23e-09 | 13 |
gastrointestinal system mucosa | 6.23e-09 | 13 |
organ component layer | 8.49e-09 | 24 |
subdivision of digestive tract | 3.02e-08 | 114 |
lymphoid system | 5.92e-07 | 3 |