FFCP PHASE1:Mm9::chr6:78416806..78416819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78416806..78416819,+ | |||
|description=CAGE_peak_at_chr6:78416806..78416819,+ | |description=CAGE_peak_at_chr6:78416806..78416819,+ | ||
|id=chr6:78416806..78416819,+ | |id=chr6:78416806..78416819,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.12e-20!6;CL:0000677!2.12e-20!6;CL:0000212!2.12e-20!6;CL:0000584!2.12e-20!6;CL:0000075!2.09e-17!7;CL:0000066!1.20e-14!25;CL:0002563!2.08e-13!9;CL:0002251!2.08e-13!9;CL:0002076!2.84e-13!15;CL:0000473!1.84e-11!3;CL:0000627!1.84e-11!3;CL:0000682!1.84e-11!3;CL:0000223!1.17e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.18e-18,3;CL:0000239,2.73e-16,6;CL:0000677,2.73e-16,6;CL:0000584,2.73e-16,6;CL:0000075,5.29e-14,7;CL:0000066,3.30e-11,25;CL:0002563,6.05e-11,9;CL:0002251,6.05e-11,9;CL:0000473,2.58e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.94e-26!15;UBERON:0001242!1.53e-20!13;UBERON:0000060!1.53e-20!13;UBERON:0001262!1.53e-20!13;UBERON:0004786!1.53e-20!13;UBERON:0004923!9.61e-16!24;UBERON:0000160!5.61e-15!43;UBERON:0003350!2.08e-13!9;UBERON:0004808!2.08e-13!9;UBERON:0001277!2.08e-13!9;UBERON:0000331!1.70e-11!3;UBERON:0002116!1.70e-11!3;UBERON:0001204!1.70e-11!3;UBERON:0001168!1.70e-11!3;UBERON:0000485!7.32e-11!11;UBERON:0005409!4.23e-10!59;UBERON:0001962!5.72e-08!2;UBERON:0001961!5.72e-08!2;UBERON:0001744!5.72e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.31e-31,15;UBERON:0001242,4.27e-22,13;UBERON:0001262,4.27e-22,13;UBERON:0004786,4.27e-22,13;UBERON:0004923,3.62e-19,24;UBERON:0000331,1.03e-18,3;UBERON:0002116,1.03e-18,3;UBERON:0001204,1.03e-18,3;UBERON:0001168,1.03e-18,3;UBERON:0000160,6.98e-18,31;UBERON:0002108,3.43e-14,4;UBERON:0001962,1.25e-12,2;UBERON:0001961,1.25e-12,2;UBERON:0001744,1.25e-12,2;UBERON:0005409,2.13e-11,47;UBERON:0003350,6.05e-11,9;UBERON:0004808,6.05e-11,9;UBERON:0001277,6.05e-11,9;UBERON:0000485,5.44e-09,11;UBERON:0002465,1.02e-08,3;UBERON:0003199,2.11e-07,1 | |||
|phase1_expression=0,5.93258192986914,8.18998630901165,0.30246421130683,3.50627010962443,0.671517087647559,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,7.34109699414944,16.0784949952206,3.87685796543167,3.44753972297422,10.8313349090133,1.76421090831952,12.4169085966971,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0.949058123089023,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.93258192986914,8.18998630901165,0.30246421130683,3.50627010962443,0.671517087647559,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,7.34109699414944,16.0784949952206,3.87685796543167,3.44753972297422,10.8313349090133,1.76421090831952,12.4169085966971,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0.949058123089023,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78416806..78416819,+ | |short_description=p@chr6:78416806..78416819,+ | ||
}} | }} |
Latest revision as of 03:41, 6 August 2015
Short description: | p@chr6:78416806..78416819, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78416806..78416819, + |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.18e-18 | 3 |
brush border epithelial cell | 2.73e-16 | 6 |
gut absorptive cell | 2.73e-16 | 6 |
enterocyte | 2.73e-16 | 6 |
columnar/cuboidal epithelial cell | 5.29e-14 | 7 |
epithelial cell | 3.30e-11 | 25 |
intestinal epithelial cell | 6.05e-11 | 9 |
epithelial cell of alimentary canal | 6.05e-11 | 9 |
defensive cell | 2.58e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.31e-31 | 15 |
intestinal mucosa | 4.27e-22 | 13 |
wall of intestine | 4.27e-22 | 13 |
gastrointestinal system mucosa | 4.27e-22 | 13 |
organ component layer | 3.62e-19 | 24 |
ileal mucosa | 1.03e-18 | 3 |
ileum | 1.03e-18 | 3 |
mucosa of small intestine | 1.03e-18 | 3 |
wall of small intestine | 1.03e-18 | 3 |
intestine | 6.98e-18 | 31 |
small intestine | 3.43e-14 | 4 |
gut-associated lymphoid tissue | 1.25e-12 | 2 |
mucosa-associated lymphoid tissue | 1.25e-12 | 2 |
lymphoid tissue | 1.25e-12 | 2 |
gastrointestinal system | 2.13e-11 | 47 |
epithelium of mucosa | 6.05e-11 | 9 |
gastrointestinal system epithelium | 6.05e-11 | 9 |
intestinal epithelium | 6.05e-11 | 9 |
simple columnar epithelium | 5.44e-09 | 11 |
lymphoid system | 1.02e-08 | 3 |
egg chamber | 2.11e-07 | 1 |