FFCP PHASE1:Mm9::chr6:78416850..78416860,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:78416850..78416860,-
|short_description=p@chr6:78416850..78416860,-
|description=CAGE_peak_at_chr6:78416850..78416860,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78416850..78416860,- | |||
|description=CAGE_peak_at_chr6:78416850..78416860,- | |||
|id=chr6:78416850..78416860,- | |||
|ontology_enrichment_celltype=CL:0000239!3.70e-23!6;CL:0000677!3.70e-23!6;CL:0000212!3.70e-23!6;CL:0000584!3.70e-23!6;CL:0000075!8.69e-20!7;CL:0002563!2.76e-15!9;CL:0002251!2.76e-15!9;CL:0000066!1.99e-14!25;CL:0000473!2.87e-13!3;CL:0000627!2.87e-13!3;CL:0000682!2.87e-13!3;CL:0002076!4.72e-12!15;CL:0000223!7.82e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.52e-21,3;CL:0000066,6.43e-13,25;CL:0000239,7.52e-11,6;CL:0000677,7.52e-11,6;CL:0000584,7.52e-11,6;CL:0000473,1.40e-09,7;CL:0000075,2.22e-09,7;CL:0002076,1.92e-07,15;CL:0002563,2.07e-07,9;CL:0002251,2.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.39e-36!15;UBERON:0001242!4.01e-29!13;UBERON:0000060!4.01e-29!13;UBERON:0001262!4.01e-29!13;UBERON:0004786!4.01e-29!13;UBERON:0004923!6.06e-22!24;UBERON:0000160!2.49e-15!43;UBERON:0003350!2.76e-15!9;UBERON:0004808!2.76e-15!9;UBERON:0001277!2.76e-15!9;UBERON:0000331!3.78e-13!3;UBERON:0002116!3.78e-13!3;UBERON:0001204!3.78e-13!3;UBERON:0001168!3.78e-13!3;UBERON:0000485!2.04e-12!11;UBERON:0005409!1.73e-10!59;UBERON:0001962!4.58e-09!2;UBERON:0001961!4.58e-09!2;UBERON:0001744!4.58e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.15e-28,15;UBERON:0000331,2.44e-21,3;UBERON:0002116,2.44e-21,3;UBERON:0001204,2.44e-21,3;UBERON:0001168,2.44e-21,3;UBERON:0001242,9.16e-19,13;UBERON:0001262,9.16e-19,13;UBERON:0004786,9.16e-19,13;UBERON:0004923,1.56e-17,24;UBERON:0002108,3.57e-16,4;UBERON:0001962,2.29e-14,2;UBERON:0001961,2.29e-14,2;UBERON:0001744,2.29e-14,2;UBERON:0000160,2.72e-10,31;UBERON:0002465,6.83e-10,3;UBERON:0003199,4.80e-08,1;UBERON:0003350,2.07e-07,9;UBERON:0004808,2.07e-07,9;UBERON:0001277,2.07e-07,9 | |||
|phase1_expression=0,6.2815573375085,10.0099832665698,0.90739263392049,0.500895729946347,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,10.3361753540704,8.18447792702242,6.24866574789078,6.46079626151671,2.52030129759931,17.5167103417691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01104889002957,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.2815573375085,10.0099832665698,0.90739263392049,0.500895729946347,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,10.3361753540704,8.18447792702242,6.24866574789078,6.46079626151671,2.52030129759931,17.5167103417691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01104889002957,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78416850..78416860,- | |||
}} | }} |
Latest revision as of 03:41, 6 August 2015
Short description: | p@chr6:78416850..78416860, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78416850..78416860, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.52e-21 | 3 |
epithelial cell | 6.43e-13 | 25 |
brush border epithelial cell | 7.52e-11 | 6 |
gut absorptive cell | 7.52e-11 | 6 |
enterocyte | 7.52e-11 | 6 |
defensive cell | 1.40e-09 | 7 |
columnar/cuboidal epithelial cell | 2.22e-09 | 7 |
endo-epithelial cell | 1.92e-07 | 15 |
intestinal epithelial cell | 2.07e-07 | 9 |
epithelial cell of alimentary canal | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.15e-28 | 15 |
ileal mucosa | 2.44e-21 | 3 |
ileum | 2.44e-21 | 3 |
mucosa of small intestine | 2.44e-21 | 3 |
wall of small intestine | 2.44e-21 | 3 |
intestinal mucosa | 9.16e-19 | 13 |
wall of intestine | 9.16e-19 | 13 |
gastrointestinal system mucosa | 9.16e-19 | 13 |
organ component layer | 1.56e-17 | 24 |
small intestine | 3.57e-16 | 4 |
gut-associated lymphoid tissue | 2.29e-14 | 2 |
mucosa-associated lymphoid tissue | 2.29e-14 | 2 |
lymphoid tissue | 2.29e-14 | 2 |
intestine | 2.72e-10 | 31 |
lymphoid system | 6.83e-10 | 3 |
egg chamber | 4.80e-08 | 1 |
epithelium of mucosa | 2.07e-07 | 9 |
gastrointestinal system epithelium | 2.07e-07 | 9 |
intestinal epithelium | 2.07e-07 | 9 |