FFCP PHASE1:Mm9::chr6:78417572..78417600,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:78417572..78417600,-
|short_description=p@chr6:78417572..78417600,-
|description=CAGE_peak_at_chr6:78417572..78417600,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78417572..78417600,- | |||
|description=CAGE_peak_at_chr6:78417572..78417600,- | |||
|id=chr6:78417572..78417600,- | |||
|ontology_enrichment_celltype=CL:0000239!2.04e-15!6;CL:0000677!2.04e-15!6;CL:0000212!2.04e-15!6;CL:0000584!2.04e-15!6;CL:0002563!3.28e-13!9;CL:0002251!3.28e-13!9;CL:0000075!4.20e-13!7;CL:0000473!4.24e-09!3;CL:0000627!4.24e-09!3;CL:0000682!4.24e-09!3;CL:0000066!1.20e-08!25;CL:0002076!1.75e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-25,6;CL:0000677,2.60e-25,6;CL:0000584,2.60e-25,6;CL:0000075,1.22e-21,7;CL:0002563,9.69e-17,9;CL:0002251,9.69e-17,9;CL:0000682,1.80e-14,3;CL:0000066,5.95e-13,25;CL:0002076,7.43e-10,15;CL:0000223,2.90e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.01e-26!15;UBERON:0001242!3.40e-22!13;UBERON:0000060!3.40e-22!13;UBERON:0001262!3.40e-22!13;UBERON:0004786!3.40e-22!13;UBERON:0000160!5.80e-17!43;UBERON:0004923!1.52e-15!24;UBERON:0003350!3.28e-13!9;UBERON:0004808!3.28e-13!9;UBERON:0001277!3.28e-13!9;UBERON:0005409!3.95e-11!59;UBERON:0000485!1.32e-10!11;UBERON:0000331!6.04e-09!3;UBERON:0002116!6.04e-09!3;UBERON:0001204!6.04e-09!3;UBERON:0001168!6.04e-09!3;UBERON:0001007!3.14e-07!128;UBERON:0001555!3.14e-07!128;UBERON:0007026!3.14e-07!128;UBERON:0004119!4.97e-07!130;UBERON:0000925!4.97e-07!130;UBERON:0006595!4.97e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.20e-33,15;UBERON:0001242,6.25e-26,13;UBERON:0001262,6.25e-26,13;UBERON:0004786,6.25e-26,13;UBERON:0000160,1.18e-24,31;UBERON:0004923,4.05e-20,24;UBERON:0003350,9.69e-17,9;UBERON:0004808,9.69e-17,9;UBERON:0001277,9.69e-17,9;UBERON:0005409,1.81e-15,47;UBERON:0000331,3.29e-14,3;UBERON:0002116,3.29e-14,3;UBERON:0001204,3.29e-14,3;UBERON:0001168,3.29e-14,3;UBERON:0000485,1.29e-13,11;UBERON:0002108,8.84e-11,4;UBERON:0001962,2.20e-09,2;UBERON:0001961,2.20e-09,2;UBERON:0001744,2.20e-09,2;UBERON:0001155,3.92e-09,2;UBERON:0000059,3.92e-09,2 | |||
|phase1_expression=0,13.6100408979351,16.3799726180233,1.51232105653415,6.51164448930251,4.19698179779725,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.27974995218242,5.96464130774642,24.1177424928308,22.3996238002719,25.8565479223067,21.852693237483,8.06496415231778,45.8982157056481,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,6.34681359992506,0,0,0,0,0,0,1.89811624617805,0,0,0,0,1.79763881730844,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,13.6100408979351,16.3799726180233,1.51232105653415,6.51164448930251,4.19698179779725,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.27974995218242,5.96464130774642,24.1177424928308,22.3996238002719,25.8565479223067,21.852693237483,8.06496415231778,45.8982157056481,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,6.34681359992506,0,0,0,0,0,0,1.89811624617805,0,0,0,0,1.79763881730844,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr6:78417572..78417600,- | |||
}} | }} |
Latest revision as of 03:42, 6 August 2015
Short description: | p@chr6:78417572..78417600, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78417572..78417600, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.60e-25 | 6 |
gut absorptive cell | 2.60e-25 | 6 |
enterocyte | 2.60e-25 | 6 |
columnar/cuboidal epithelial cell | 1.22e-21 | 7 |
intestinal epithelial cell | 9.69e-17 | 9 |
epithelial cell of alimentary canal | 9.69e-17 | 9 |
M cell of gut | 1.80e-14 | 3 |
epithelial cell | 5.95e-13 | 25 |
endo-epithelial cell | 7.43e-10 | 15 |
endodermal cell | 2.90e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.20e-33 | 15 |
intestinal mucosa | 6.25e-26 | 13 |
wall of intestine | 6.25e-26 | 13 |
gastrointestinal system mucosa | 6.25e-26 | 13 |
intestine | 1.18e-24 | 31 |
organ component layer | 4.05e-20 | 24 |
epithelium of mucosa | 9.69e-17 | 9 |
gastrointestinal system epithelium | 9.69e-17 | 9 |
intestinal epithelium | 9.69e-17 | 9 |
gastrointestinal system | 1.81e-15 | 47 |
ileal mucosa | 3.29e-14 | 3 |
ileum | 3.29e-14 | 3 |
mucosa of small intestine | 3.29e-14 | 3 |
wall of small intestine | 3.29e-14 | 3 |
simple columnar epithelium | 1.29e-13 | 11 |
small intestine | 8.84e-11 | 4 |
gut-associated lymphoid tissue | 2.20e-09 | 2 |
mucosa-associated lymphoid tissue | 2.20e-09 | 2 |
lymphoid tissue | 2.20e-09 | 2 |
colon | 3.92e-09 | 2 |
large intestine | 3.92e-09 | 2 |