FFCP PHASE1:Mm9::chr1:89805648..89805686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:89805648..89805686,+ | |||
|description=CAGE_peak_at_chr1:89805648..89805686,+ | |description=CAGE_peak_at_chr1:89805648..89805686,+ | ||
|id=chr1:89805648..89805686,+ | |id=chr1:89805648..89805686,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.60e-12!9;CL:0002251!7.60e-12!9;CL:0000239!4.12e-09!6;CL:0000677!4.12e-09!6;CL:0000212!4.12e-09!6;CL:0000584!4.12e-09!6;CL:0000075!1.25e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.72e-16,6;CL:0000677,2.72e-16,6;CL:0000584,2.72e-16,6;CL:0000075,7.22e-14,7;CL:0002563,1.24e-10,9;CL:0002251,1.24e-10,9;CL:0000682,3.92e-09,3;CL:0000066,1.60e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.61e-23!43;UBERON:0000344!7.64e-20!15;UBERON:0005409!5.60e-19!59;UBERON:0001242!1.78e-17!13;UBERON:0000060!1.78e-17!13;UBERON:0001262!1.78e-17!13;UBERON:0004786!1.78e-17!13;UBERON:0004923!3.69e-12!24;UBERON:0003350!7.60e-12!9;UBERON:0004808!7.60e-12!9;UBERON:0001277!7.60e-12!9;UBERON:0000485!2.91e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.97e-46,31;UBERON:0005409,1.97e-31,47;UBERON:0000344,6.05e-25,15;UBERON:0001242,1.69e-20,13;UBERON:0001262,1.69e-20,13;UBERON:0004786,1.69e-20,13;UBERON:0004923,1.31e-14,24;UBERON:0002108,3.51e-12,4;UBERON:0001007,1.27e-11,116;UBERON:0001555,1.27e-11,116;UBERON:0007026,1.27e-11,116;UBERON:0004119,2.50e-11,118;UBERON:0000925,2.50e-11,118;UBERON:0006595,2.50e-11,118;UBERON:0003350,1.24e-10,9;UBERON:0004808,1.24e-10,9;UBERON:0001277,1.24e-10,9;UBERON:0004921,9.53e-10,114;UBERON:0000331,9.67e-10,3;UBERON:0002116,9.67e-10,3;UBERON:0001204,9.67e-10,3;UBERON:0001168,9.67e-10,3;UBERON:0000485,1.42e-08,11 | |||
|phase1_expression=0,24.4282785347553,26.8449551239826,29.3390284967625,28.5510566069418,2.85394762250213,2.80335168714631,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91953021319121,8.94696196161963,25.2662064210609,18.0920038386811,15.0829862880122,58.7172366120195,29.9915854414318,24.3903561720835,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,13.0474232852686,0,0,26.8229907969021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,37.0069036941854,6.61126416658861,0,0,0.128867461322093,0.605050573870028,1.77902435075896,4.75564065281398,15.6594590309689,18.4462829290892,7.79139147280835,9.54991065797524,10.1381325301942,17.9763881730844,11.4553166433588,6.96994456390285,0,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0,0.147610147979602,0.470996183524124,1.23397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.328281799490123,16.9058885245313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,11.6653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0.423073039458382,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,24.4282785347553,26.8449551239826,29.3390284967625,28.5510566069418,2.85394762250213,2.80335168714631,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91953021319121,8.94696196161963,25.2662064210609,18.0920038386811,15.0829862880122,58.7172366120195,29.9915854414318,24.3903561720835,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,13.0474232852686,0,0,26.8229907969021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,37.0069036941854,6.61126416658861,0,0,0.128867461322093,0.605050573870028,1.77902435075896,4.75564065281398,15.6594590309689,18.4462829290892,7.79139147280835,9.54991065797524,10.1381325301942,17.9763881730844,11.4553166433588,6.96994456390285,0,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0,0.147610147979602,0.470996183524124,1.23397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.328281799490123,16.9058885245313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,11.6653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0.423073039458382,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:89805648..89805686,+ | |short_description=p@chr1:89805648..89805686,+ | ||
}} | }} |
Latest revision as of 04:12, 6 August 2015
Short description: | p@chr1:89805648..89805686, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89805648..89805686, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.72e-16 | 6 |
gut absorptive cell | 2.72e-16 | 6 |
enterocyte | 2.72e-16 | 6 |
columnar/cuboidal epithelial cell | 7.22e-14 | 7 |
intestinal epithelial cell | 1.24e-10 | 9 |
epithelial cell of alimentary canal | 1.24e-10 | 9 |
M cell of gut | 3.92e-09 | 3 |
epithelial cell | 1.60e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.97e-46 | 31 |
gastrointestinal system | 1.97e-31 | 47 |
mucosa | 6.05e-25 | 15 |
intestinal mucosa | 1.69e-20 | 13 |
wall of intestine | 1.69e-20 | 13 |
gastrointestinal system mucosa | 1.69e-20 | 13 |
organ component layer | 1.31e-14 | 24 |
small intestine | 3.51e-12 | 4 |
digestive system | 1.27e-11 | 116 |
digestive tract | 1.27e-11 | 116 |
primitive gut | 1.27e-11 | 116 |
endoderm-derived structure | 2.50e-11 | 118 |
endoderm | 2.50e-11 | 118 |
presumptive endoderm | 2.50e-11 | 118 |
epithelium of mucosa | 1.24e-10 | 9 |
gastrointestinal system epithelium | 1.24e-10 | 9 |
intestinal epithelium | 1.24e-10 | 9 |
subdivision of digestive tract | 9.53e-10 | 114 |
ileal mucosa | 9.67e-10 | 3 |
ileum | 9.67e-10 | 3 |
mucosa of small intestine | 9.67e-10 | 3 |
wall of small intestine | 9.67e-10 | 3 |
simple columnar epithelium | 1.42e-08 | 11 |