FFCP PHASE1:Mm9::chr1:92866006..92866048,-: Difference between revisions
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{{FFCP|EntrezGene=19329|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=76bp_to_ENSMUST00000128226_5end|description=CAGE_peak_1_at_Rab17_5end|id=chr1:92866006..92866048,-|ontology_enrichment_celltype=CL:0000066!5.11e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,8.80e-10,25;CL:0002563,2.74e-09,9;CL:0002251,2.74e-09,9;CL:0000223,2.06e-08,20;CL:0000239,2.24e-07,6;CL:0000677,2.24e-07,6;CL:0000584,2.24e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.52e-12!43;UBERON:0005409!9.70e-11!59;UBERON:0000344!1.39e-10!15;UBERON:0002365!9.39e-10!25;UBERON:0002330!9.39e-10!25;UBERON:0004119!1.26e-09!130;UBERON:0000925!1.26e-09!130;UBERON:0006595!1.26e-09!130;UBERON:0001242!1.90e-09!13;UBERON:0000060!1.90e-09!13;UBERON:0001262!1.90e-09!13;UBERON:0004786!1.90e-09!13;UBERON:0001007!2.49e-09!128;UBERON:0001555!2.49e-09!128;UBERON:0007026!2.49e-09!128;UBERON:0009854!3.75e-09!23;UBERON:0009856!3.75e-09!23;UBERON:0002107!1.03e-08!22;UBERON:0007499!1.03e-08!22;UBERON:0006925!1.03e-08!22;UBERON:0009497!1.03e-08!22;UBERON:0000015!1.03e-08!22;UBERON:0002423!1.03e-08!22;UBERON:0006235!1.03e-08!22;UBERON:0008835!1.03e-08!22;UBERON:0003894!1.03e-08!22;UBERON:0004161!1.03e-08!22;UBERON:0008836!1.03e-08!22;UBERON:0004921!1.53e-08!126;UBERON:0004185!1.53e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.36e-25,31;UBERON:0005409,3.71e-17,47;UBERON:0000344,4.40e-15,15;UBERON:0001242,2.20e-13,13;UBERON:0001262,2.20e-13,13;UBERON:0004786,2.20e-13,13;UBERON:0004119,3.30e-13,118;UBERON:0000925,3.30e-13,118;UBERON:0006595,3.30e-13,118;UBERON:0001007,3.84e-13,116;UBERON:0001555,3.84e-13,116;UBERON:0007026,3.84e-13,116;UBERON:0004921,5.92e-12,114;UBERON:0009854,6.40e-11,23;UBERON:0009856,6.40e-11,23;UBERON:0002365,7.26e-11,25;UBERON:0002330,7.26e-11,25;UBERON:0002107,2.75e-10,22;UBERON:0007499,2.75e-10,22;UBERON:0006925,2.75e-10,22;UBERON:0009497,2.75e-10,22;UBERON:0000015,2.75e-10,22;UBERON:0002423,2.75e-10,22;UBERON:0006235,2.75e-10,22;UBERON:0008835,2.75e-10,22;UBERON:0003894,2.75e-10,22;UBERON:0004161,2.75e-10,22;UBERON:0008836,2.75e-10,22;UBERON:0004923,1.24e-09,24;UBERON:0003350,2.74e-09,9;UBERON:0004808,2.74e-09,9;UBERON:0001277,2.74e-09,9;UBERON:0000485,4.20e-07,11|phase1_expression=0,26.8711063882308,39.5849338268896,49.3016664430133,49.5886772646884,7.05092942029937,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0.992909512008853,1.04479915655574,9.27956052201759,10.782236210157,35.6023817751313,21.1073378117947,17.6686410802429,27.3633724017178,31.2517360902314,11.0865255327652,0,0,0,5.77703239502549,4.98703936075477,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,2.8419204597844,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0.869593466105033,2.58127163094416,3.39985666853875,15.1116893658589,12.3457519315057,8.06448396775204,4.91555470461132,0,0,0,0.14084341977668,0,0,0,0.216491041011214,1.01343946190039,1.01104889002957,5.82337786567206,0,0,0.520455980298408,0.304465478312141,0,0.301445281105245,0,0.251333182659351,10.3821886448437,0.289198713839823,0,0,0,0,3.72783522436244,0,0,13.5392239260553,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0.373220911830279,2.52722758433675,1.26265113531884,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,1.07986979021165,0.697601834251224,1.3413670069981,0.583826711835847,0.987359099480883,0.492502392237286,0.56748166682099,0.877199924551994,1.3173006917463,0.536825675041487,0,0,18.8338706300765,6.34681359992506,0,0,2.19074684247559,4.63872106633688,6.44896327150124,12.5548913234289,18.0321043386914,14.822905925161,11.5614196048124,13.5290400987983,9.74820435595601,17.0775687644302,14.4812493416045,18.7192796859105,0.379335801906163,0.571242563048644,0,2.64746726198909,2.32742984601151,2.03393877681924,4.3000845244495,5.90440591918409,7.53593893638599,10.1185674415876,8.00422093135302,0.333690211432188,0.786235980452812,1.34917267430912,1.21716072833102,2.41177159752417,1.2731292589071,2.87696137450811,2.91843408195064,3.29473695825698,0,10.0478055870496,7.80094182786401,12.8815227753027,12.19902411949,16.4030797263545,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,2.20749397043786,0,0,0,0,1.26203287766503,0,1.07711698866399,1.43381278771531,1.11399337041197,0.566153061577665,1.21443210502468,1.16902343164525,3.16230222357219,0,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.728341908464944,0,0.754420319023592,0,0.307435147943927,3.10113951801865,0.363533729477506,0.712994756769443,0,0,1.03135543248187,1.36175842301515,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,1.0591603543191,0,0,0,0.0603129249281559,0,0,16.6144076879015,0,0,0,0,0,0,0,0.679913719975421,0.979660166265606,0.138199973804424,1.90934123603023,0.316335993581135,0.609958401380546,0.648032044930808,0.836353184057875,1.74690050996942,0.809186078308924,1.07449492442937,0.785267825952089,5.18459893167171,8.69875038321696,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.579568782096571,4.31669693537719,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.972426868273176,1.46729213839588,1.10306105070008,0.888986911206461,0.618105171716683,0.962757628775446,1.26348605881899,0.760437899670719,1.50901073108861,0.749132059759059,0.704276676453562,0.918967503289812,0,0.463537303779422,1.35036454324594,1.23625770240992,0.441596760403192,1.02860775715625,0.70990322463735,1.1921809497366,1.16277133305863,1.59985946706062,0.930760686808441,1.46342378298218,0.526139422875686,0.407412341537585,0.561142271657738,0.830445126869219,0.985044823755635,1.22769312950907,0.77468420592983,0.385813221962283,0.249810577937946,0.935726433781634,1.28922632428979,0,0.441182838239031,0.231867835620421|short_description=p1@Rab17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19329 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENSMUST00000128226_5end | |||
|cluster_id=chr1:92866006..92866048,- | |||
|description=CAGE_peak_1_at_Rab17_5end | |||
|id=chr1:92866006..92866048,- | |||
|ontology_enrichment_celltype=CL:0000066!5.11e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.80e-10,25;CL:0002563,2.74e-09,9;CL:0002251,2.74e-09,9;CL:0000223,2.06e-08,20;CL:0000239,2.24e-07,6;CL:0000677,2.24e-07,6;CL:0000584,2.24e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.52e-12!43;UBERON:0005409!9.70e-11!59;UBERON:0000344!1.39e-10!15;UBERON:0002365!9.39e-10!25;UBERON:0002330!9.39e-10!25;UBERON:0004119!1.26e-09!130;UBERON:0000925!1.26e-09!130;UBERON:0006595!1.26e-09!130;UBERON:0001242!1.90e-09!13;UBERON:0000060!1.90e-09!13;UBERON:0001262!1.90e-09!13;UBERON:0004786!1.90e-09!13;UBERON:0001007!2.49e-09!128;UBERON:0001555!2.49e-09!128;UBERON:0007026!2.49e-09!128;UBERON:0009854!3.75e-09!23;UBERON:0009856!3.75e-09!23;UBERON:0002107!1.03e-08!22;UBERON:0007499!1.03e-08!22;UBERON:0006925!1.03e-08!22;UBERON:0009497!1.03e-08!22;UBERON:0000015!1.03e-08!22;UBERON:0002423!1.03e-08!22;UBERON:0006235!1.03e-08!22;UBERON:0008835!1.03e-08!22;UBERON:0003894!1.03e-08!22;UBERON:0004161!1.03e-08!22;UBERON:0008836!1.03e-08!22;UBERON:0004921!1.53e-08!126;UBERON:0004185!1.53e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.36e-25,31;UBERON:0005409,3.71e-17,47;UBERON:0000344,4.40e-15,15;UBERON:0001242,2.20e-13,13;UBERON:0001262,2.20e-13,13;UBERON:0004786,2.20e-13,13;UBERON:0004119,3.30e-13,118;UBERON:0000925,3.30e-13,118;UBERON:0006595,3.30e-13,118;UBERON:0001007,3.84e-13,116;UBERON:0001555,3.84e-13,116;UBERON:0007026,3.84e-13,116;UBERON:0004921,5.92e-12,114;UBERON:0009854,6.40e-11,23;UBERON:0009856,6.40e-11,23;UBERON:0002365,7.26e-11,25;UBERON:0002330,7.26e-11,25;UBERON:0002107,2.75e-10,22;UBERON:0007499,2.75e-10,22;UBERON:0006925,2.75e-10,22;UBERON:0009497,2.75e-10,22;UBERON:0000015,2.75e-10,22;UBERON:0002423,2.75e-10,22;UBERON:0006235,2.75e-10,22;UBERON:0008835,2.75e-10,22;UBERON:0003894,2.75e-10,22;UBERON:0004161,2.75e-10,22;UBERON:0008836,2.75e-10,22;UBERON:0004923,1.24e-09,24;UBERON:0003350,2.74e-09,9;UBERON:0004808,2.74e-09,9;UBERON:0001277,2.74e-09,9;UBERON:0000485,4.20e-07,11 | |||
|phase1_expression=0,26.8711063882308,39.5849338268896,49.3016664430133,49.5886772646884,7.05092942029937,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0.992909512008853,1.04479915655574,9.27956052201759,10.782236210157,35.6023817751313,21.1073378117947,17.6686410802429,27.3633724017178,31.2517360902314,11.0865255327652,0,0,0,5.77703239502549,4.98703936075477,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,2.8419204597844,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0.869593466105033,2.58127163094416,3.39985666853875,15.1116893658589,12.3457519315057,8.06448396775204,4.91555470461132,0,0,0,0.14084341977668,0,0,0,0.216491041011214,1.01343946190039,1.01104889002957,5.82337786567206,0,0,0.520455980298408,0.304465478312141,0,0.301445281105245,0,0.251333182659351,10.3821886448437,0.289198713839823,0,0,0,0,3.72783522436244,0,0,13.5392239260553,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0.373220911830279,2.52722758433675,1.26265113531884,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,1.07986979021165,0.697601834251224,1.3413670069981,0.583826711835847,0.987359099480883,0.492502392237286,0.56748166682099,0.877199924551994,1.3173006917463,0.536825675041487,0,0,18.8338706300765,6.34681359992506,0,0,2.19074684247559,4.63872106633688,6.44896327150124,12.5548913234289,18.0321043386914,14.822905925161,11.5614196048124,13.5290400987983,9.74820435595601,17.0775687644302,14.4812493416045,18.7192796859105,0.379335801906163,0.571242563048644,0,2.64746726198909,2.32742984601151,2.03393877681924,4.3000845244495,5.90440591918409,7.53593893638599,10.1185674415876,8.00422093135302,0.333690211432188,0.786235980452812,1.34917267430912,1.21716072833102,2.41177159752417,1.2731292589071,2.87696137450811,2.91843408195064,3.29473695825698,0,10.0478055870496,7.80094182786401,12.8815227753027,12.19902411949,16.4030797263545,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,2.20749397043786,0,0,0,0,1.26203287766503,0,1.07711698866399,1.43381278771531,1.11399337041197,0.566153061577665,1.21443210502468,1.16902343164525,3.16230222357219,0,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.728341908464944,0,0.754420319023592,0,0.307435147943927,3.10113951801865,0.363533729477506,0.712994756769443,0,0,1.03135543248187,1.36175842301515,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,1.0591603543191,0,0,0,0.0603129249281559,0,0,16.6144076879015,0,0,0,0,0,0,0,0.679913719975421,0.979660166265606,0.138199973804424,1.90934123603023,0.316335993581135,0.609958401380546,0.648032044930808,0.836353184057875,1.74690050996942,0.809186078308924,1.07449492442937,0.785267825952089,5.18459893167171,8.69875038321696,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.579568782096571,4.31669693537719,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.972426868273176,1.46729213839588,1.10306105070008,0.888986911206461,0.618105171716683,0.962757628775446,1.26348605881899,0.760437899670719,1.50901073108861,0.749132059759059,0.704276676453562,0.918967503289812,0,0.463537303779422,1.35036454324594,1.23625770240992,0.441596760403192,1.02860775715625,0.70990322463735,1.1921809497366,1.16277133305863,1.59985946706062,0.930760686808441,1.46342378298218,0.526139422875686,0.407412341537585,0.561142271657738,0.830445126869219,0.985044823755635,1.22769312950907,0.77468420592983,0.385813221962283,0.249810577937946,0.935726433781634,1.28922632428979,0,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Rab17 | |||
}} |
Revision as of 04:45, 6 August 2015
Short description: | p1@Rab17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab17_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 76bp_to_ENSMUST00000128226_5end |
EntrezGene: | 19329 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.80e-10 | 25 |
intestinal epithelial cell | 2.74e-09 | 9 |
epithelial cell of alimentary canal | 2.74e-09 | 9 |
endodermal cell | 2.06e-08 | 20 |
brush border epithelial cell | 2.24e-07 | 6 |
gut absorptive cell | 2.24e-07 | 6 |
enterocyte | 2.24e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.36e-25 | 31 |
gastrointestinal system | 3.71e-17 | 47 |
mucosa | 4.40e-15 | 15 |
intestinal mucosa | 2.20e-13 | 13 |
wall of intestine | 2.20e-13 | 13 |
gastrointestinal system mucosa | 2.20e-13 | 13 |
endoderm-derived structure | 3.30e-13 | 118 |
endoderm | 3.30e-13 | 118 |
presumptive endoderm | 3.30e-13 | 118 |
digestive system | 3.84e-13 | 116 |
digestive tract | 3.84e-13 | 116 |
primitive gut | 3.84e-13 | 116 |
subdivision of digestive tract | 5.92e-12 | 114 |
digestive tract diverticulum | 6.40e-11 | 23 |
sac | 6.40e-11 | 23 |
exocrine gland | 7.26e-11 | 25 |
exocrine system | 7.26e-11 | 25 |
liver | 2.75e-10 | 22 |
epithelial sac | 2.75e-10 | 22 |
digestive gland | 2.75e-10 | 22 |
epithelium of foregut-midgut junction | 2.75e-10 | 22 |
anatomical boundary | 2.75e-10 | 22 |
hepatobiliary system | 2.75e-10 | 22 |
foregut-midgut junction | 2.75e-10 | 22 |
hepatic diverticulum | 2.75e-10 | 22 |
liver primordium | 2.75e-10 | 22 |
septum transversum | 2.75e-10 | 22 |
liver bud | 2.75e-10 | 22 |
organ component layer | 1.24e-09 | 24 |
epithelium of mucosa | 2.74e-09 | 9 |
gastrointestinal system epithelium | 2.74e-09 | 9 |
intestinal epithelium | 2.74e-09 | 9 |
simple columnar epithelium | 4.20e-07 | 11 |