FFCP PHASE1:Mm9::chr6:84543910..84543916,-: Difference between revisions
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{{FFCP|EntrezGene=232174|HGNC=|MCL_coexpression_id=1450|UniProt=Q811W2|association_with_transcript=-8bp_to_NM_001177713,uc012eoc.1_5end|description=CAGE_peak_3_at_Cyp26b1_5end|id=chr6:84543910..84543916,-|ontology_enrichment_celltype=CL:0000540!3.58e-08!33;CL:0000047!3.58e-08!33;CL:0000031!3.58e-08!33;CL:0000404!3.58e-08!33;CL:0000107!7.65e-08!9;CL:0000221!1.40e-07!44;CL:0000133!1.40e-07!44;CL:0002319!6.55e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-12,33;CL:0000047,1.70e-12,33;CL:0000031,1.70e-12,33;CL:0000404,1.70e-12,33;CL:0000221,3.92e-10,44;CL:0000133,3.92e-10,44;CL:0000393,4.41e-10,39;CL:0000211,4.41e-10,39;CL:0000107,2.11e-09,9;CL:0000120,2.80e-09,3;CL:0002319,7.48e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.34e-08!73;UBERON:0005743!3.34e-08!73;UBERON:0002410!7.65e-08!9;UBERON:0000073!1.08e-07!75;UBERON:0001016!1.08e-07!75;UBERON:0004121!4.25e-07!102;UBERON:0000924!4.25e-07!102;UBERON:0006601!4.25e-07!102;UBERON:0002298!5.99e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.91e-10,73;UBERON:0001016,1.92e-09,75;UBERON:0002410,2.11e-09,9;UBERON:0010313,3.67e-08,3;UBERON:0002342,3.67e-08,3;UBERON:0002005,3.67e-08,3;UBERON:0005428,3.67e-08,3;UBERON:0005062,3.67e-08,3;UBERON:0000013,6.77e-08,3;UBERON:0000010,1.44e-07,11;UBERON:0004733,1.76e-07,6;UBERON:0004732,1.76e-07,6;UBERON:0002028,1.76e-07,6;UBERON:0007277,1.76e-07,6;UBERON:0004121,1.85e-07,95;UBERON:0000924,1.85e-07,95;UBERON:0006601,1.85e-07,95|phase1_expression=19.6983081938897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,40.26097571106,47.609188134483,55.7771635085438,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,3.30347642998166,0.255374676170375,4.45458946443106,0,0.182975287204819,0,12.2840519560608,0.56276261003168,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.4919558044451,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,8.79676168616511,0,0,0,0,7.63932260964596,0.915001205637253,0,0,0,1.87009240103604,0,0,0,0,0.631325567659422,0.390361328888111,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,9.63303539926752,9.25972324078405,0,0,4.10160685241134,6.24701990874622,1.93881057959519,0.238968797952552,0.222798674082394,0.283076530788832,2.42886421004937,2.63030272120181,1.97643888973262,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.776152102696527,0.857348140126369,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28332164685189,5.1873233542134,4.43907374960749,0.972426868273176,1.25767897576789,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,1.01391719956096,0.565879024158229,0.655490552289177,0.832326981263301,1.20614484806788,0.952587382566147,0.579421629724277,0.38581844092741,0.824171801606613,0.735994600671987,0.685738504770831,1.06485483695602,0.953744759789284,0.290692833264657,0.564656282491984,1.4384483341585,0.73171189149109,1.05227884575137,0.407412341537585,0,1.06771516311757,0.788035859004508,1.22769312950907,1.23949472948773,1.54325288784913,4.74640098082097,1.16965804222704,0.429742108096597,0,0,0|short_description=p3@Cyp26b1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:232174 | |||
|HGNC= | |||
|MCL_coexpression_id=1450 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q811W2 | |||
|association_with_transcript=-8bp_to_NM_001177713,uc012eoc.1_5end | |||
|cluster_id=chr6:84543910..84543916,- | |||
|description=CAGE_peak_3_at_Cyp26b1_5end | |||
|id=chr6:84543910..84543916,- | |||
|ontology_enrichment_celltype=CL:0000540!3.58e-08!33;CL:0000047!3.58e-08!33;CL:0000031!3.58e-08!33;CL:0000404!3.58e-08!33;CL:0000107!7.65e-08!9;CL:0000221!1.40e-07!44;CL:0000133!1.40e-07!44;CL:0002319!6.55e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-12,33;CL:0000047,1.70e-12,33;CL:0000031,1.70e-12,33;CL:0000404,1.70e-12,33;CL:0000221,3.92e-10,44;CL:0000133,3.92e-10,44;CL:0000393,4.41e-10,39;CL:0000211,4.41e-10,39;CL:0000107,2.11e-09,9;CL:0000120,2.80e-09,3;CL:0002319,7.48e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.34e-08!73;UBERON:0005743!3.34e-08!73;UBERON:0002410!7.65e-08!9;UBERON:0000073!1.08e-07!75;UBERON:0001016!1.08e-07!75;UBERON:0004121!4.25e-07!102;UBERON:0000924!4.25e-07!102;UBERON:0006601!4.25e-07!102;UBERON:0002298!5.99e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.91e-10,73;UBERON:0001016,1.92e-09,75;UBERON:0002410,2.11e-09,9;UBERON:0010313,3.67e-08,3;UBERON:0002342,3.67e-08,3;UBERON:0002005,3.67e-08,3;UBERON:0005428,3.67e-08,3;UBERON:0005062,3.67e-08,3;UBERON:0000013,6.77e-08,3;UBERON:0000010,1.44e-07,11;UBERON:0004733,1.76e-07,6;UBERON:0004732,1.76e-07,6;UBERON:0002028,1.76e-07,6;UBERON:0007277,1.76e-07,6;UBERON:0004121,1.85e-07,95;UBERON:0000924,1.85e-07,95;UBERON:0006601,1.85e-07,95 | |||
|phase1_expression=19.6983081938897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,40.26097571106,47.609188134483,55.7771635085438,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,3.30347642998166,0.255374676170375,4.45458946443106,0,0.182975287204819,0,12.2840519560608,0.56276261003168,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.4919558044451,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,8.79676168616511,0,0,0,0,7.63932260964596,0.915001205637253,0,0,0,1.87009240103604,0,0,0,0,0.631325567659422,0.390361328888111,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,9.63303539926752,9.25972324078405,0,0,4.10160685241134,6.24701990874622,1.93881057959519,0.238968797952552,0.222798674082394,0.283076530788832,2.42886421004937,2.63030272120181,1.97643888973262,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.776152102696527,0.857348140126369,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28332164685189,5.1873233542134,4.43907374960749,0.972426868273176,1.25767897576789,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,1.01391719956096,0.565879024158229,0.655490552289177,0.832326981263301,1.20614484806788,0.952587382566147,0.579421629724277,0.38581844092741,0.824171801606613,0.735994600671987,0.685738504770831,1.06485483695602,0.953744759789284,0.290692833264657,0.564656282491984,1.4384483341585,0.73171189149109,1.05227884575137,0.407412341537585,0,1.06771516311757,0.788035859004508,1.22769312950907,1.23949472948773,1.54325288784913,4.74640098082097,1.16965804222704,0.429742108096597,0,0,0 | |||
|short_description=p3@Cyp26b1 | |||
}} |
Revision as of 05:05, 6 August 2015
Short description: | p3@Cyp26b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp26b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1450 |
Association with transcript: | -8bp_to_NM_001177713, uc012eoc.1_5end |
EntrezGene: | 232174 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.70e-12 | 33 |
neuronal stem cell | 1.70e-12 | 33 |
neuroblast | 1.70e-12 | 33 |
electrically signaling cell | 1.70e-12 | 33 |
ectodermal cell | 3.92e-10 | 44 |
neurectodermal cell | 3.92e-10 | 44 |
electrically responsive cell | 4.41e-10 | 39 |
electrically active cell | 4.41e-10 | 39 |
autonomic neuron | 2.11e-09 | 9 |
granule cell | 2.80e-09 | 3 |
neural cell | 7.48e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.91e-10 | 73 |
nervous system | 1.92e-09 | 75 |
autonomic nervous system | 2.11e-09 | 9 |
neural crest-derived structure | 3.67e-08 | 3 |
neural crest | 3.67e-08 | 3 |
enteric nervous system | 3.67e-08 | 3 |
vagal neural crest | 3.67e-08 | 3 |
neural fold | 3.67e-08 | 3 |
sympathetic nervous system | 6.77e-08 | 3 |
peripheral nervous system | 1.44e-07 | 11 |
segmental subdivision of hindbrain | 1.76e-07 | 6 |
segmental subdivision of nervous system | 1.76e-07 | 6 |
hindbrain | 1.76e-07 | 6 |
presumptive hindbrain | 1.76e-07 | 6 |
ectoderm-derived structure | 1.85e-07 | 95 |
ectoderm | 1.85e-07 | 95 |
presumptive ectoderm | 1.85e-07 | 95 |