FFCP PHASE1:Mm9::chr13:73397958..73397994,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50916|HGNC=|MCL_coexpression_id=2083|UniProt=Q9QY61|association_with_transcript=13bp_to_ENSMUST00000022095,NM_018885,uc007rdf.2_5end|description=CAGE_peak_1_at_Irx4_5end|id=chr13:73397958..73397994,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.31e-14!18;UBERON:0000948!7.31e-14!18;UBERON:0005498!7.31e-14!18;UBERON:0004140!7.31e-14!18;UBERON:0009881!7.31e-14!18;UBERON:0004141!7.31e-14!18;UBERON:0003084!7.31e-14!18;UBERON:0007005!7.31e-14!18;UBERON:0004139!7.31e-14!18;UBERON:0004291!7.31e-14!18;UBERON:0004535!1.56e-09!23;UBERON:0001009!1.56e-09!23;UBERON:0001444!1.15e-08!11;UBERON:0004872!6.80e-08!33;UBERON:0000970!4.80e-07!9;UBERON:0000019!4.80e-07!9;UBERON:0000047!4.80e-07!9;UBERON:0004088!4.80e-07!9;UBERON:0002104!4.80e-07!9;UBERON:0001456!4.80e-07!9;UBERON:0003072!4.80e-07!9;UBERON:0003071!4.80e-07!9;UBERON:0004128!4.80e-07!9;UBERON:0005085!7.62e-07!13;UBERON:0000014!9.70e-07!5;UBERON:0001003!9.70e-07!5;UBERON:0002097!9.70e-07!5;UBERON:0002199!9.70e-07!5;UBERON:0007029!9.70e-07!5;UBERON:0007376!9.70e-07!5;UBERON:0002416!9.70e-07!5;UBERON:0007383!9.70e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.31e-22,18;UBERON:0000948,3.31e-22,18;UBERON:0005498,3.31e-22,18;UBERON:0004140,3.31e-22,18;UBERON:0009881,3.31e-22,18;UBERON:0004141,3.31e-22,18;UBERON:0003084,3.31e-22,18;UBERON:0007005,3.31e-22,18;UBERON:0004139,3.31e-22,18;UBERON:0004291,3.31e-22,18;UBERON:0004535,1.86e-16,23;UBERON:0001009,1.86e-16,23;UBERON:0000014,9.30e-11,5;UBERON:0001003,9.30e-11,5;UBERON:0002097,9.30e-11,5;UBERON:0002199,9.30e-11,5;UBERON:0007029,9.30e-11,5;UBERON:0007376,9.30e-11,5;UBERON:0002416,9.30e-11,5;UBERON:0007383,9.30e-11,5;UBERON:0004872,3.10e-10,33;UBERON:0001444,1.68e-08,11;UBERON:0003103,4.95e-08,43;UBERON:0003102,4.96e-07,22;UBERON:0000033,5.52e-07,13;UBERON:0005085,5.52e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,1.26265113531884,0.260240885925407,1.60931473103431,3.06105620669094,1.9591626318643,1.42876648217788,1.2811372028485,0.562210347358373,0.517406741478031,0.862271971731369,0.567318240503458,0.351902248327898,0.43839146485515,3.05851974148158,3.83077383174383,4.32142486456681,0,0,0,0,2.48550927042602,3.28336483973535,2.16074473753218,6.39210786080068,8.26409773339096,8.63895832169318,8.8362899005155,10.9992094573844,10.0418194435766,6.41783414662574,9.85004784474571,10.7821516695988,9.35679919522127,11.1970558798436,8.32079796314305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,1.47529281905711,4.96686143348518,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,6.10079135883476,19.2142667768128,11.3388298864933,11.340372680298,9.19189038572343,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,1.70174701947806,1.46729213839588,2.02227859295016,1.55572709461131,1.44224540067226,0.320919209591815,0.252697211763798,0.760437899670719,1.13175804831646,0.842773567228942,1.28050304809739,0.746661096422973,0.476293691283074,0.579421629724277,0.964546102318525,0,1.17759136107518,2.05721551431249,0.70990322463735,0.715308569841963,0.872078499793971,1.2234219453993,0.846146078916765,0.73171189149109,0.789209134313529,0.679020569229309,0,0.593175090620871,1.0835493061312,0,0.929621047115796,1.54325288784913,2.49810577937946,1.40358965067245,4.72716318906256,0.765153328275374,1.98532277207564,0|short_description=p1@Irx4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50916 | |||
|HGNC= | |||
|MCL_coexpression_id=2083 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QY61 | |||
|association_with_transcript=13bp_to_ENSMUST00000022095,NM_018885,uc007rdf.2_5end | |||
|cluster_id=chr13:73397958..73397994,+ | |||
|description=CAGE_peak_1_at_Irx4_5end | |||
|id=chr13:73397958..73397994,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.31e-14!18;UBERON:0000948!7.31e-14!18;UBERON:0005498!7.31e-14!18;UBERON:0004140!7.31e-14!18;UBERON:0009881!7.31e-14!18;UBERON:0004141!7.31e-14!18;UBERON:0003084!7.31e-14!18;UBERON:0007005!7.31e-14!18;UBERON:0004139!7.31e-14!18;UBERON:0004291!7.31e-14!18;UBERON:0004535!1.56e-09!23;UBERON:0001009!1.56e-09!23;UBERON:0001444!1.15e-08!11;UBERON:0004872!6.80e-08!33;UBERON:0000970!4.80e-07!9;UBERON:0000019!4.80e-07!9;UBERON:0000047!4.80e-07!9;UBERON:0004088!4.80e-07!9;UBERON:0002104!4.80e-07!9;UBERON:0001456!4.80e-07!9;UBERON:0003072!4.80e-07!9;UBERON:0003071!4.80e-07!9;UBERON:0004128!4.80e-07!9;UBERON:0005085!7.62e-07!13;UBERON:0000014!9.70e-07!5;UBERON:0001003!9.70e-07!5;UBERON:0002097!9.70e-07!5;UBERON:0002199!9.70e-07!5;UBERON:0007029!9.70e-07!5;UBERON:0007376!9.70e-07!5;UBERON:0002416!9.70e-07!5;UBERON:0007383!9.70e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.31e-22,18;UBERON:0000948,3.31e-22,18;UBERON:0005498,3.31e-22,18;UBERON:0004140,3.31e-22,18;UBERON:0009881,3.31e-22,18;UBERON:0004141,3.31e-22,18;UBERON:0003084,3.31e-22,18;UBERON:0007005,3.31e-22,18;UBERON:0004139,3.31e-22,18;UBERON:0004291,3.31e-22,18;UBERON:0004535,1.86e-16,23;UBERON:0001009,1.86e-16,23;UBERON:0000014,9.30e-11,5;UBERON:0001003,9.30e-11,5;UBERON:0002097,9.30e-11,5;UBERON:0002199,9.30e-11,5;UBERON:0007029,9.30e-11,5;UBERON:0007376,9.30e-11,5;UBERON:0002416,9.30e-11,5;UBERON:0007383,9.30e-11,5;UBERON:0004872,3.10e-10,33;UBERON:0001444,1.68e-08,11;UBERON:0003103,4.95e-08,43;UBERON:0003102,4.96e-07,22;UBERON:0000033,5.52e-07,13;UBERON:0005085,5.52e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,1.26265113531884,0.260240885925407,1.60931473103431,3.06105620669094,1.9591626318643,1.42876648217788,1.2811372028485,0.562210347358373,0.517406741478031,0.862271971731369,0.567318240503458,0.351902248327898,0.43839146485515,3.05851974148158,3.83077383174383,4.32142486456681,0,0,0,0,2.48550927042602,3.28336483973535,2.16074473753218,6.39210786080068,8.26409773339096,8.63895832169318,8.8362899005155,10.9992094573844,10.0418194435766,6.41783414662574,9.85004784474571,10.7821516695988,9.35679919522127,11.1970558798436,8.32079796314305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,1.47529281905711,4.96686143348518,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,6.10079135883476,19.2142667768128,11.3388298864933,11.340372680298,9.19189038572343,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,1.70174701947806,1.46729213839588,2.02227859295016,1.55572709461131,1.44224540067226,0.320919209591815,0.252697211763798,0.760437899670719,1.13175804831646,0.842773567228942,1.28050304809739,0.746661096422973,0.476293691283074,0.579421629724277,0.964546102318525,0,1.17759136107518,2.05721551431249,0.70990322463735,0.715308569841963,0.872078499793971,1.2234219453993,0.846146078916765,0.73171189149109,0.789209134313529,0.679020569229309,0,0.593175090620871,1.0835493061312,0,0.929621047115796,1.54325288784913,2.49810577937946,1.40358965067245,4.72716318906256,0.765153328275374,1.98532277207564,0 | |||
|short_description=p1@Irx4 | |||
}} |
Revision as of 07:28, 6 August 2015
Short description: | p1@Irx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Irx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2083 |
Association with transcript: | 13bp_to_ENSMUST00000022095, NM_018885, uc007rdf.2_5end |
EntrezGene: | 50916 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.31e-22 | 18 |
heart | 3.31e-22 | 18 |
primitive heart tube | 3.31e-22 | 18 |
primary heart field | 3.31e-22 | 18 |
anterior lateral plate mesoderm | 3.31e-22 | 18 |
heart tube | 3.31e-22 | 18 |
heart primordium | 3.31e-22 | 18 |
cardiac mesoderm | 3.31e-22 | 18 |
cardiogenic plate | 3.31e-22 | 18 |
heart rudiment | 3.31e-22 | 18 |
cardiovascular system | 1.86e-16 | 23 |
circulatory system | 1.86e-16 | 23 |
zone of skin | 9.30e-11 | 5 |
skin epidermis | 9.30e-11 | 5 |
skin of body | 9.30e-11 | 5 |
integument | 9.30e-11 | 5 |
surface | 9.30e-11 | 5 |
outer epithelium | 9.30e-11 | 5 |
integumental system | 9.30e-11 | 5 |
enveloping layer of ectoderm | 9.30e-11 | 5 |
splanchnic layer of lateral plate mesoderm | 3.10e-10 | 33 |
subdivision of head | 1.68e-08 | 11 |
compound organ | 4.95e-08 | 43 |
surface structure | 4.96e-07 | 22 |
head | 5.52e-07 | 13 |
ectodermal placode | 5.52e-07 | 13 |