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FFCP PHASE1:Mm9::chr13:74908046..74908066,-: Difference between revisions

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{{FFCP|EntrezGene=12380|HGNC=|MCL_coexpression_id=2872|UniProt=Q921U7|association_with_transcript=-8bp_to_ENSMUST00000170451_5end|description=CAGE_peak_4_at_Cast_5end|id=chr13:74908046..74908066,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.44e-12!47;UBERON:0000926!8.16e-12!193;UBERON:0004120!8.16e-12!193;UBERON:0006603!8.16e-12!193;UBERON:0005057!1.75e-09!51;UBERON:0002107!1.94e-09!22;UBERON:0007499!1.94e-09!22;UBERON:0006925!1.94e-09!22;UBERON:0009497!1.94e-09!22;UBERON:0000015!1.94e-09!22;UBERON:0002423!1.94e-09!22;UBERON:0006235!1.94e-09!22;UBERON:0008835!1.94e-09!22;UBERON:0003894!1.94e-09!22;UBERON:0004161!1.94e-09!22;UBERON:0008836!1.94e-09!22;UBERON:0000077!3.07e-09!97;UBERON:0003104!1.26e-08!131;UBERON:0009142!1.26e-08!131;UBERON:0001041!1.69e-08!92;UBERON:0002365!1.75e-08!25;UBERON:0002330!1.75e-08!25;UBERON:0009854!2.98e-08!23;UBERON:0009856!2.98e-08!23;UBERON:0002405!5.86e-08!70;UBERON:0004119!7.36e-08!130;UBERON:0000925!7.36e-08!130;UBERON:0006595!7.36e-08!130;UBERON:0001007!1.06e-07!128;UBERON:0001555!1.06e-07!128;UBERON:0007026!1.06e-07!128;UBERON:0004921!1.75e-07!126;UBERON:0004185!1.75e-07!126;UBERON:0009569!2.33e-07!66;UBERON:0004872!4.95e-07!33;UBERON:0003081!8.04e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.18e-12,80;UBERON:0003914,1.48e-12,47;UBERON:0004119,4.63e-11,118;UBERON:0000925,4.63e-11,118;UBERON:0006595,4.63e-11,118;UBERON:0001007,6.80e-11,116;UBERON:0001555,6.80e-11,116;UBERON:0007026,6.80e-11,116;UBERON:0004921,1.20e-10,114;UBERON:0002107,1.75e-09,22;UBERON:0007499,1.75e-09,22;UBERON:0006925,1.75e-09,22;UBERON:0009497,1.75e-09,22;UBERON:0000015,1.75e-09,22;UBERON:0002423,1.75e-09,22;UBERON:0006235,1.75e-09,22;UBERON:0008835,1.75e-09,22;UBERON:0003894,1.75e-09,22;UBERON:0004161,1.75e-09,22;UBERON:0008836,1.75e-09,22;UBERON:0009854,2.13e-08,23;UBERON:0009856,2.13e-08,23;UBERON:0002365,2.30e-08,25;UBERON:0002330,2.30e-08,25;UBERON:0001048,4.45e-08,134;UBERON:0009569,2.37e-07,66;UBERON:0005256,3.57e-07,45;UBERON:0004872,5.29e-07,33|phase1_expression=2.5623815536767,6.2815573375085,3.63999391511629,2.41971369045464,2.00358291978539,1.84667199103079,1.40167584357315,28.4071311571468,32.2406173727317,28.3218076849612,4.28044920563762,4.06838010876216,12.497653284978,13.1130603628496,9.32707333083856,17.0079224607454,4.89693314689703,6.46697438984387,8.63820931716154,6.36584477697045,1.61582251287033,1.09220046320974,1.04479915655574,3.51983330145495,5.96464130774642,2.8711598205751,3.01533397311352,6.89507944594845,4.3705386474966,1.51218077855958,3.10422714917427,3.17515336729816,1.84519436275371,0,2.88851619751275,1.49611180822643,2.6542016314108,16.3227335987394,6.2506827561904,2.61761871986899,22.9410280332096,9.56263678941824,4.36959317728038,2.64383317748712,3.04130793658544,2.75320128242522,0,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,0,9.89917375740644,12.3311564141929,15.4603147605533,5.14518872071894,0.573066879877513,7.21940929188419,0.202316460859598,0,0,0.338844532069132,0,0.899899717281399,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,0.766124028511126,0.921639199537461,0.131886287730194,0,0.52091337055676,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,0.427115042397309,0.372798891650601,4.84647637332378,5.51672388779534,11.5945795480671,6.0229671388697,36.0384806865108,8.09554787456726,5.84798775702902,6.72040330646003,7.8648875273781,2.21559419351475,1.03914401841148,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,0,32.2571651106709,29.8964641260616,28.3093689208279,5.36664234679582,15.018397251536,3.41416919849097,2.77576522825817,1.52232739156071,2.53677046981664,1.95939432718409,3.29248379979973,3.01599819191221,10.6293836125781,11.423349196673,10.6153266233985,6.79420769779119,11.0420759230197,11.1521308221101,0,2.04946557908083,0.41889341362691,3.0654846625031,5.27186547826049,3.59941638596045,3.93917703926501,2.39665023047716,1.37250180845588,0.125654352112864,1.56441888173049,0.255715457330331,2.90903262383384,0.973447578406546,4.3790926455636,9.20611582514688,5.05445516867349,2.94618598241064,1.30120442962704,0.459804208866946,0.900310649026746,2.56198190320716,2.31324097114515,2.43416068541215,1.3118241438362,3.10444044886819,0.862271971731369,1.89106080167819,1.58356011747554,2.41115305670332,3.61461423993277,6.268538997399,8.64284972913362,1.99034266818493,3.51106593656617,4.11756651383544,4.83077948972507,4.55676699578104,7.97388603935727,7.02242039697958,6.62885259638589,7.08351234290654,6.32495162838251,5.8133486187602,6.70683503499048,6.889155199663,4.93679549740441,5.08919138645195,5.43161023957233,7.01759939641595,8.56245449635098,9.93127498826751,0.841159794256509,0.102904612379284,5.94753809370836,1.85115396664481,1.49301775374664,1.62565670302307,2.44848176511977,3.2269363939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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12380
|HGNC=
|MCL_coexpression_id=2872
|TSSclassifier=NA
|UniProt=uniprot:Q921U7
|association_with_transcript=-8bp_to_ENSMUST00000170451_5end
|cluster_id=chr13:74908046..74908066,-
|description=CAGE_peak_4_at_Cast_5end
|id=chr13:74908046..74908066,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.44e-12!47;UBERON:0000926!8.16e-12!193;UBERON:0004120!8.16e-12!193;UBERON:0006603!8.16e-12!193;UBERON:0005057!1.75e-09!51;UBERON:0002107!1.94e-09!22;UBERON:0007499!1.94e-09!22;UBERON:0006925!1.94e-09!22;UBERON:0009497!1.94e-09!22;UBERON:0000015!1.94e-09!22;UBERON:0002423!1.94e-09!22;UBERON:0006235!1.94e-09!22;UBERON:0008835!1.94e-09!22;UBERON:0003894!1.94e-09!22;UBERON:0004161!1.94e-09!22;UBERON:0008836!1.94e-09!22;UBERON:0000077!3.07e-09!97;UBERON:0003104!1.26e-08!131;UBERON:0009142!1.26e-08!131;UBERON:0001041!1.69e-08!92;UBERON:0002365!1.75e-08!25;UBERON:0002330!1.75e-08!25;UBERON:0009854!2.98e-08!23;UBERON:0009856!2.98e-08!23;UBERON:0002405!5.86e-08!70;UBERON:0004119!7.36e-08!130;UBERON:0000925!7.36e-08!130;UBERON:0006595!7.36e-08!130;UBERON:0001007!1.06e-07!128;UBERON:0001555!1.06e-07!128;UBERON:0007026!1.06e-07!128;UBERON:0004921!1.75e-07!126;UBERON:0004185!1.75e-07!126;UBERON:0009569!2.33e-07!66;UBERON:0004872!4.95e-07!33;UBERON:0003081!8.04e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.18e-12,80;UBERON:0003914,1.48e-12,47;UBERON:0004119,4.63e-11,118;UBERON:0000925,4.63e-11,118;UBERON:0006595,4.63e-11,118;UBERON:0001007,6.80e-11,116;UBERON:0001555,6.80e-11,116;UBERON:0007026,6.80e-11,116;UBERON:0004921,1.20e-10,114;UBERON:0002107,1.75e-09,22;UBERON:0007499,1.75e-09,22;UBERON:0006925,1.75e-09,22;UBERON:0009497,1.75e-09,22;UBERON:0000015,1.75e-09,22;UBERON:0002423,1.75e-09,22;UBERON:0006235,1.75e-09,22;UBERON:0008835,1.75e-09,22;UBERON:0003894,1.75e-09,22;UBERON:0004161,1.75e-09,22;UBERON:0008836,1.75e-09,22;UBERON:0009854,2.13e-08,23;UBERON:0009856,2.13e-08,23;UBERON:0002365,2.30e-08,25;UBERON:0002330,2.30e-08,25;UBERON:0001048,4.45e-08,134;UBERON:0009569,2.37e-07,66;UBERON:0005256,3.57e-07,45;UBERON:0004872,5.29e-07,33
|phase1_expression=2.5623815536767,6.2815573375085,3.63999391511629,2.41971369045464,2.00358291978539,1.84667199103079,1.40167584357315,28.4071311571468,32.2406173727317,28.3218076849612,4.28044920563762,4.06838010876216,12.497653284978,13.1130603628496,9.32707333083856,17.0079224607454,4.89693314689703,6.46697438984387,8.63820931716154,6.36584477697045,1.61582251287033,1.09220046320974,1.04479915655574,3.51983330145495,5.96464130774642,2.8711598205751,3.01533397311352,6.89507944594845,4.3705386474966,1.51218077855958,3.10422714917427,3.17515336729816,1.84519436275371,0,2.88851619751275,1.49611180822643,2.6542016314108,16.3227335987394,6.2506827561904,2.61761871986899,22.9410280332096,9.56263678941824,4.36959317728038,2.64383317748712,3.04130793658544,2.75320128242522,0,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,0,9.89917375740644,12.3311564141929,15.4603147605533,5.14518872071894,0.573066879877513,7.21940929188419,0.202316460859598,0,0,0.338844532069132,0,0.899899717281399,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,0.766124028511126,0.921639199537461,0.131886287730194,0,0.52091337055676,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,0.427115042397309,0.372798891650601,4.84647637332378,5.51672388779534,11.5945795480671,6.0229671388697,36.0384806865108,8.09554787456726,5.84798775702902,6.72040330646003,7.8648875273781,2.21559419351475,1.03914401841148,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,0,32.2571651106709,29.8964641260616,28.3093689208279,5.36664234679582,15.018397251536,3.41416919849097,2.77576522825817,1.52232739156071,2.53677046981664,1.95939432718409,3.29248379979973,3.01599819191221,10.6293836125781,11.423349196673,10.6153266233985,6.79420769779119,11.0420759230197,11.1521308221101,0,2.04946557908083,0.41889341362691,3.0654846625031,5.27186547826049,3.59941638596045,3.93917703926501,2.39665023047716,1.37250180845588,0.125654352112864,1.56441888173049,0.255715457330331,2.90903262383384,0.973447578406546,4.3790926455636,9.20611582514688,5.05445516867349,2.94618598241064,1.30120442962704,0.459804208866946,0.900310649026746,2.56198190320716,2.31324097114515,2.43416068541215,1.3118241438362,3.10444044886819,0.862271971731369,1.89106080167819,1.58356011747554,2.41115305670332,3.61461423993277,6.268538997399,8.64284972913362,1.99034266818493,3.51106593656617,4.11756651383544,4.83077948972507,4.55676699578104,7.97388603935727,7.02242039697958,6.62885259638589,7.08351234290654,6.32495162838251,5.8133486187602,6.70683503499048,6.889155199663,4.93679549740441,5.08919138645195,5.43161023957233,7.01759939641595,8.56245449635098,9.93127498826751,0.841159794256509,0.102904612379284,5.94753809370836,1.85115396664481,1.49301775374664,1.62565670302307,2.44848176511977,3.22693639397348,2.89091456998331,1.90225626112559,2.37264530772256,3.62337700392824,5.27803938480566,5.76973768919337,3.11942539390592,5.39291645192533,6.26800344636613,6.96994456390285,1.13800740571849,2.62771579002376,2.25415471346161,1.4255592949172,1.35766741017338,3.29638353484497,2.33975187359752,4.28069429140846,3.61097074035162,3.94870924549762,7.41131567717872,10.67808676583,9.63139076054695,11.2431056192427,12.9830477688642,10.6117950291063,7.89340140522401,10.64475708568,13.619359049103,7.13859674289012,10.0637744569148,6.69853705803306,5.61667811606209,5.80931419278357,6.81710171383266,8.20153986317724,5.72734889516475,0.568474235311454,2.28150967018836,2.54617628662782,2.58159273117352,1.34005005953453,2.14239276797412,5.85400943573396,4.72905432318573,5.3151525515706,3.34855014180723,7.04612253277673,4.14443956478149,5.78596234326046,1.50791283939272,0.54390568381871,0.983528546038072,4.69092468718045,3.37156238974363,2.93029216480508,2.95082901678016,26.2569764292548,0.631016438832513,1.56175497718655,1.29254038639679,2.38968797952552,1.78238939265915,1.41538265394416,0,1.75353514746787,1.58115111178609,0.963963949265421,2.98074178937364,1.95872164033981,3.4206261464251,2.3095817216155,0,1.69946445308487,1.209294227859,3.01768127609437,1.18120757152309,3.07435147943927,3.87642439752332,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,1.03135543248187,3.06395645178409,1.26042765821917,0.905510786479282,0.857348140126369,0.886701168211368,1.78368817602071,1.15184314421485,1.522324745573,3.52007562095566,5.08396970073168,2.64634077665954,20.940554123568,15.6620493895028,9.34850336386416,10.3853939282729,14.4443991775654,7.28702091574627,3.8939313422207,8.88528580148834,4.74689796315412,6.11141940320049,14.5043711893612,15.3097535047548,9.60868327467395,14.6181449794716,13.7152423277185,13.4053974590291,5.72802370809068,0.949007980743406,3.25311147402958,5.61627772273367,10.8725913927524,8.51613998610093,7.95699643670442,8.26534557253359,7.85267825952089,8.16574331738295,4.34937519160848,1.12738587736838,2.54178128274764,1.98550188548517,1.55560950675238,2.71235629303235,3.21016638432478,4.81164678447591,1.69265700297135,1.15345278868282,1.93267296660805,4.32045009386798,2.21207784439725,1.62180172232131,1.33524244314275,1.81889152168913,2.8644271306797,4.76835251475036,4.44723163223885,3.98761723371358,5.14928894735553,4.03896075271499,2.92395936896837,4.97035191772737,5.58028681513911,5.2594605981706,43.7589640377358,4.21773311410723,10.2273796534802,5.20442310728643,7.34120457322324,5.63047426353546,5.12824547948342,21.2224695288275,1.50471631210609,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,1.03552062350364,1.03787347584177,2.39414924040619,1.70733605754134,4.132814190161,5.24032906569956,1.83843508450014,4.00044110042907,2.88449080134452,4.81378814387723,3.28506375292937,3.04175159868288,3.39527414494937,4.49479235855436,2.94515701062399,4.25022470271538,1.90517476513229,2.54945517078682,3.27945674788299,3.70877310722976,4.26876868389752,3.42869252385415,4.08194354166476,3.09967046931517,2.47088908274958,3.10560955370591,2.876896668317,3.29270351170991,3.15683653725411,4.20992752922171,4.48913817326191,2.49133538060766,2.26560309463796,5.32000356120596,4.02835787083512,5.78719832943424,1.99848462350357,3.27504251823572,7.09074478359384,9.37312827137333,6.17655973534643,6.72416723299222
|short_description=p4@Cast
}}

Revision as of 07:58, 6 August 2015

Short description:p4@Cast
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cast_5end
Coexpression cluster:MCL_coexpression_mm9:2872
Association with transcript: -8bp_to_ENSMUST00000170451_5end
EntrezGene:12380
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cast

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E732.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F228.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.50
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D94.85
Mouse Schwann, donor2.CNhs12573.11746-123F95.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C436.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G132.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G229.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H111.42
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G15.43
heart, neonate N20.CNhs11127.821-26I67.02
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H69.63
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F413.62
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C320.94
skin, neonate N00.CNhs11124.650-25G415.66
skin, neonate N03.CNhs11215.662-22H39.35
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H115.31
spleen, neonate N25.CNhs11099.1354-25G39.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.41
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A98.27
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B74.81
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C45.15
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B443.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D521.22
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut1.18e-1280
epithelial tube1.48e-1247
endoderm-derived structure4.63e-11118
endoderm4.63e-11118
presumptive endoderm4.63e-11118
digestive system6.80e-11116
digestive tract6.80e-11116
primitive gut6.80e-11116
subdivision of digestive tract1.20e-10114
liver1.75e-0922
epithelial sac1.75e-0922
digestive gland1.75e-0922
epithelium of foregut-midgut junction1.75e-0922
anatomical boundary1.75e-0922
hepatobiliary system1.75e-0922
foregut-midgut junction1.75e-0922
hepatic diverticulum1.75e-0922
liver primordium1.75e-0922
septum transversum1.75e-0922
liver bud1.75e-0922
digestive tract diverticulum2.13e-0823
sac2.13e-0823
exocrine gland2.30e-0825
exocrine system2.30e-0825
primordium4.45e-08134
subdivision of trunk2.37e-0766
trunk mesenchyme3.57e-0745
splanchnic layer of lateral plate mesoderm5.29e-0733
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