Personal tools

FFCP PHASE1:Mm9::chrX:54477240..54477286,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:54477240..54477286,+
|DHSsupport=NA
|short_description=p@chrX:54477240..54477286,+
|DPIdataset=NA
|description=CAGE_peak_at_chrX:54477240..54477286,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chrX:54477240..54477286,+
|description=CAGE_peak_at_chrX:54477240..54477286,+
|id=chrX:54477240..54477286,+
|ontology_enrichment_celltype=CL:0000791!3.18e-29!9;CL:0000789!3.18e-29!9;CL:0002420!3.18e-29!9;CL:0002419!3.18e-29!9;CL:0000790!3.18e-29!9;CL:0000624!1.71e-26!8;CL:0000084!1.28e-23!11;CL:0000827!1.28e-23!11;CL:0000838!1.62e-21!12;CL:0000893!1.38e-20!6;CL:0002489!1.38e-20!6;CL:0000898!1.38e-20!6;CL:0000809!1.38e-20!6;CL:0000810!1.38e-20!6;CL:0000895!1.38e-20!6;CL:0000808!1.38e-20!6;CL:0000894!1.38e-20!6;CL:0000806!1.38e-20!6;CL:0000807!1.38e-20!6;CL:0000805!1.38e-20!6;CL:0002425!1.38e-20!6;CL:0002436!1.38e-20!6;CL:0002427!1.38e-20!6;CL:0002428!1.38e-20!6;CL:0002429!1.38e-20!6;CL:0002433!1.38e-20!6;CL:0002431!1.38e-20!6;CL:0002432!1.38e-20!6;CL:0000542!9.76e-20!13;CL:0000051!9.76e-20!13;CL:0000738!1.04e-14!17;CL:0002087!1.04e-14!17;CL:0002031!6.85e-14!25;CL:0000988!2.22e-10!32;CL:0002032!2.22e-10!32;CL:0000037!2.22e-10!32;CL:0000566!2.22e-10!32;CL:0000837!2.22e-10!32
|ontology_enrichment_celltype_v019_2=CL:0000624,1.09e-59,8;CL:0000893,6.90e-59,6;CL:0002489,6.90e-59,6;CL:0000898,6.90e-59,6;CL:0000809,6.90e-59,6;CL:0000810,6.90e-59,6;CL:0000895,6.90e-59,6;CL:0000808,6.90e-59,6;CL:0000894,6.90e-59,6;CL:0000806,6.90e-59,6;CL:0000807,6.90e-59,6;CL:0000805,6.90e-59,6;CL:0002425,6.90e-59,6;CL:0002436,6.90e-59,6;CL:0002427,6.90e-59,6;CL:0002428,6.90e-59,6;CL:0002429,6.90e-59,6;CL:0002433,6.90e-59,6;CL:0002431,6.90e-59,6;CL:0002432,6.90e-59,6;CL:0000791,4.44e-53,9;CL:0000789,4.44e-53,9;CL:0002420,4.44e-53,9;CL:0002419,4.44e-53,9;CL:0000790,4.44e-53,9;CL:0000084,1.85e-43,11;CL:0000827,1.85e-43,11;CL:0000838,7.54e-40,12;CL:0000542,8.58e-37,13;CL:0000051,8.58e-37,13;CL:0000738,3.74e-28,17;CL:0002087,3.74e-28,17;CL:0002031,3.82e-19,25;CL:0000988,6.11e-15,32;CL:0002032,6.11e-15,32;CL:0000037,6.11e-15,32;CL:0000837,6.11e-15,32;CL:0002320,2.39e-10,46;CL:0000134,2.39e-10,46;CL:0000219,8.80e-09,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!2.31e-24!24;UBERON:0002370!6.57e-22!23;UBERON:0000974!6.57e-22!23;UBERON:0004807!6.57e-22!23;UBERON:0005058!6.57e-22!23;UBERON:0003351!6.57e-22!23;UBERON:0009113!6.57e-22!23;UBERON:0003295!6.57e-22!23;UBERON:0009722!6.57e-22!23;UBERON:0005562!6.57e-22!23;UBERON:0007690!6.57e-22!23;UBERON:0006562!6.97e-21!24;UBERON:0001557!6.97e-21!24;UBERON:0001042!6.97e-21!24;UBERON:0008814!6.97e-21!24;UBERON:0009145!6.97e-21!24;UBERON:0004177!1.98e-19!29;UBERON:0000072!2.92e-18!27;UBERON:0001004!9.10e-17!42;UBERON:0002193!5.02e-16!48;UBERON:0002390!4.00e-15!45;UBERON:0003061!4.00e-15!45;UBERON:0000065!5.47e-15!41;UBERON:0000063!1.82e-13!35;UBERON:0005057!2.47e-11!51;UBERON:0002405!3.17e-11!70;UBERON:0003081!3.16e-09!88;UBERON:0003929!6.70e-09!55;UBERON:0005911!8.10e-09!69;UBERON:0001041!9.92e-09!92;UBERON:0002530!2.55e-08!65;UBERON:0000077!4.46e-08!97;UBERON:0002368!6.41e-08!60;UBERON:0000490!6.09e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.79e-21,23;UBERON:0000974,8.79e-21,23;UBERON:0004807,8.79e-21,23;UBERON:0005058,8.79e-21,23;UBERON:0003351,8.79e-21,23;UBERON:0009113,8.79e-21,23;UBERON:0003295,8.79e-21,23;UBERON:0009722,8.79e-21,23;UBERON:0005562,8.79e-21,23;UBERON:0007690,8.79e-21,23;UBERON:0006562,6.47e-20,24;UBERON:0003408,6.47e-20,24;UBERON:0001557,6.47e-20,24;UBERON:0001042,6.47e-20,24;UBERON:0008814,6.47e-20,24;UBERON:0009145,6.47e-20,24;UBERON:0000072,1.07e-17,27;UBERON:0004177,1.80e-16,29;UBERON:0005057,1.80e-16,29;UBERON:0000077,1.25e-13,35;UBERON:0007811,3.01e-13,36;UBERON:0002193,8.15e-13,48;UBERON:0002405,8.15e-13,48;UBERON:0000065,1.29e-11,41;UBERON:0001004,2.47e-11,42;UBERON:0000153,4.57e-11,43;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0002390,1.45e-10,45;UBERON:0003061,1.45e-10,45;UBERON:0002384,2.39e-10,46;UBERON:0003929,1.32e-08,55;UBERON:0002368,7.23e-08,60;UBERON:0002530,3.06e-07,65;UBERON:0000490,3.98e-07,66;UBERON:0005911,8.37e-07,69
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,125.161173992832,73.7303257914279,13.0125655851384,10.6894693053751,3.76641605848653,4.28359971853087,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590758108698309,0.504832249740738,0.304827226619999,0.604957110821043,1.36441033035653,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,125.161173992832,73.7303257914279,13.0125655851384,10.6894693053751,3.76641605848653,4.28359971853087,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590758108698309,0.504832249740738,0.304827226619999,0.604957110821043,1.36441033035653,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chrX:54477240..54477286,+
}}
}}

Latest revision as of 08:33, 6 August 2015

Short description:p@chrX:54477240..54477286, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:54477240..54477286, +
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
25
50
75
100
125
150




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:54477240..54477286,%2B&oldid=4000317"