FFCP PHASE1:Mm9::chr11:68884292..68884358,+: Difference between revisions
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{{FFCP|EntrezGene=66910|HGNC=|MCL_coexpression_id=346|UniProt=Q9CPV0|association_with_transcript=0bp_to_ENSMUST00000075980,ENSMUST00000094081,ENSMUST00000123821,ENSMUST00000152142,NM_025838,NM_028336,uc007jpc.2,uc007jpd.2_5end|description=CAGE_peak_1_at_Tmem107_5end|id=chr11:68884292..68884358,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!5.98e-09!49;UBERON:0000033!1.12e-08!63;UBERON:0002346!5.81e-08!71;UBERON:0003075!5.81e-08!71;UBERON:0007284!5.81e-08!71;UBERON:0004121!5.66e-07!102;UBERON:0000924!5.66e-07!102;UBERON:0006601!5.66e-07!102;UBERON:0002780!8.58e-07!39;UBERON:0001890!8.58e-07!39;UBERON:0006240!8.58e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.97e-09,49;UBERON:0002346,2.98e-07,64;UBERON:0003075,2.98e-07,64;UBERON:0007284,2.98e-07,64;UBERON:0002780,8.58e-07,39;UBERON:0001890,8.58e-07,39;UBERON:0006240,8.58e-07,39|phase1_expression=24.1824759128239,1.04692622291808,0.454999239389536,0.60492842261366,0,5.37213670118047,4.90586545250604,0.387369970324729,0,0,0.34243593645101,0.558405112967355,0.513602189793617,0.437102012094987,9.32707333083856,11.9460407759997,18.1886088313318,2.5236973228659,1.23402990245165,3.39511721438424,16.4983982893075,12.8085327049142,11.4927907221132,4.63978026100879,3.44113921600755,3.44539178469012,3.87685796543167,4.74036711908956,5.13063232532209,6.5527833737582,6.43018480900384,27.9413496322238,23.3724619282137,0,12.4206196493048,19.4494535069436,15.1085323634153,2.51118978442145,3.906676722619,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,9.19046771221714,6.18399280439039,6.42413632565885,21.1245662973971,39.6805784612413,25.4835971971987,25.2758868796568,22.2578410384326,58.9385513896383,1.34226084846189,0,1.34437519656986,4.63066984864705,7.73640287834643,4.64104883049698,8.49729135610311,11.6378015439847,8.87363964908651,13.8926258148344,23.1216646988896,8.99899717281399,7.9109309005358,4.9733608046227,30.8588113833957,104.507379047463,7.46565208621039,8.37036817656482,9.67494822216357,9.99778445413313,9.05561017901615,8.69684674426174,6.51749202924007,15.6267193723704,7.70811166995721,6.89511625660014,8.44835932909339,8.70449499019279,7.41049913179518,7.29278718779464,7.53794097303729,11.8180148106653,10.2374826010463,10.606629077052,8.39992916714707,7.08317894136142,5.90664307998836,7.10372665003784,7.24661221754194,3.44169550792555,1.3599426674155,2.69851595818909,2.59910566979068,1.34408066129201,5.75822122540183,9.71452838694929,12.2099422163348,11.3068663843309,19.858922188512,5.13305909657271,2.54805239706646,0,6.92771331235885,6.08063677140237,9.0994400102661,3.08296475241462,1.8125651855302,8.75808620482466,10.9295755862666,11.2652226975492,10.6083128737787,16.8809357418937,5.29149182110672,7.91699525376955,8.40462890296871,2.60278842455841,6.19227386364912,7.44127509758082,4.63767188766826,7.75800405016355,5.59175283654366,3.22058876712702,2.51336048176146,1.78819938646014,10.7833612055328,17.9970819298022,6.86179226194549,7.04016005202667,15.0975198930147,8.54449594367478,9.73416193076748,5.37002460393694,7.68815764870372,8.27430441645564,9.16554274652847,7.71323217782577,8.33985102831127,2.31486041475121,13.0120442962704,20.2313851901456,14.5850325142333,21.0986744970001,16.9410882886806,15.7579875950365,15.0859776541163,9.8307280880826,6.25147179505242,6.80781888604149,8.09375171154165,10.9597866213787,11.6779844674751,13.5818344943645,12.7584924572925,9.75267907410617,11.937624184325,9.52187256324446,7.10408748488982,4.34964122324554,5.62862543954631,7.20248245844059,3.78791576936336,5.70616272067471,9.71882811190483,7.67362017676346,7.24338183778972,4.43708300995244,5.59503489705834,3.77585167381919,3.40489000092594,4.82459958503597,3.29325172936576,5.77087600669599,12.1968170167194,9.15851050175631,0.991256348951394,3.70230793328962,10.024547775156,9.0572302025571,6.05677068213839,4.63872106633688,4.66993892074228,7.98947629672748,2.37264530772256,4.6115707322723,5.02670417600539,2.78539060857611,3.50935356814416,7.19055526923377,6.48414149624083,4.38110801159608,12.1387456609972,11.1963542357534,7.88954149711563,12.6263823264095,10.2794818198842,4.62896411276103,8.28398636327771,7.0852871030209,8.47793130343424,6.54004968785543,2.37162101669719,6.67380422864376,7.86235980452812,7.42044970870017,7.30296436998611,8.44120059133459,8.65727896056827,7.19240343627027,2.7562988551756,5.49122826376163,1.43768206527355,2.97712758134803,0.312037673114561,1.51547326768267,2.33216637578486,1.92977408545347,16.812540305161,10.6115190591471,6.84452901056509,9.50572480341054,12.6732734075791,11.3904255060435,13.8065311713888,7.21994497073856,5.04432461139811,5.97954662051692,5.58091690301205,9.66793556822854,9.15230403889247,8.10034728056465,7.53956419696361,3.80733978673097,2.95058563811422,3.31124095565679,5.61927064957272,5.27452589664914,10.1639666133539,3.28212205365685,5.36363973007636,7.80877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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66910 | |||
|HGNC= | |||
|MCL_coexpression_id=346 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CPV0 | |||
|association_with_transcript=0bp_to_ENSMUST00000075980,ENSMUST00000094081,ENSMUST00000123821,ENSMUST00000152142,NM_025838,NM_028336,uc007jpc.2,uc007jpd.2_5end | |||
|cluster_id=chr11:68884292..68884358,+ | |||
|description=CAGE_peak_1_at_Tmem107_5end | |||
|id=chr11:68884292..68884358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.98e-09!49;UBERON:0000033!1.12e-08!63;UBERON:0002346!5.81e-08!71;UBERON:0003075!5.81e-08!71;UBERON:0007284!5.81e-08!71;UBERON:0004121!5.66e-07!102;UBERON:0000924!5.66e-07!102;UBERON:0006601!5.66e-07!102;UBERON:0002780!8.58e-07!39;UBERON:0001890!8.58e-07!39;UBERON:0006240!8.58e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.97e-09,49;UBERON:0002346,2.98e-07,64;UBERON:0003075,2.98e-07,64;UBERON:0007284,2.98e-07,64;UBERON:0002780,8.58e-07,39;UBERON:0001890,8.58e-07,39;UBERON:0006240,8.58e-07,39 | |||
|phase1_expression=24.1824759128239,1.04692622291808,0.454999239389536,0.60492842261366,0,5.37213670118047,4.90586545250604,0.387369970324729,0,0,0.34243593645101,0.558405112967355,0.513602189793617,0.437102012094987,9.32707333083856,11.9460407759997,18.1886088313318,2.5236973228659,1.23402990245165,3.39511721438424,16.4983982893075,12.8085327049142,11.4927907221132,4.63978026100879,3.44113921600755,3.44539178469012,3.87685796543167,4.74036711908956,5.13063232532209,6.5527833737582,6.43018480900384,27.9413496322238,23.3724619282137,0,12.4206196493048,19.4494535069436,15.1085323634153,2.51118978442145,3.906676722619,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,9.19046771221714,6.18399280439039,6.42413632565885,21.1245662973971,39.6805784612413,25.4835971971987,25.2758868796568,22.2578410384326,58.9385513896383,1.34226084846189,0,1.34437519656986,4.63066984864705,7.73640287834643,4.64104883049698,8.49729135610311,11.6378015439847,8.87363964908651,13.8926258148344,23.1216646988896,8.99899717281399,7.9109309005358,4.9733608046227,30.8588113833957,104.507379047463,7.46565208621039,8.37036817656482,9.67494822216357,9.99778445413313,9.05561017901615,8.69684674426174,6.51749202924007,15.6267193723704,7.70811166995721,6.89511625660014,8.44835932909339,8.70449499019279,7.41049913179518,7.29278718779464,7.53794097303729,11.8180148106653,10.2374826010463,10.606629077052,8.39992916714707,7.08317894136142,5.90664307998836,7.10372665003784,7.24661221754194,3.44169550792555,1.3599426674155,2.69851595818909,2.59910566979068,1.34408066129201,5.75822122540183,9.71452838694929,12.2099422163348,11.3068663843309,19.858922188512,5.13305909657271,2.54805239706646,0,6.92771331235885,6.08063677140237,9.0994400102661,3.08296475241462,1.8125651855302,8.75808620482466,10.9295755862666,11.2652226975492,10.6083128737787,16.8809357418937,5.29149182110672,7.91699525376955,8.40462890296871,2.60278842455841,6.19227386364912,7.44127509758082,4.63767188766826,7.75800405016355,5.59175283654366,3.22058876712702,2.51336048176146,1.78819938646014,10.7833612055328,17.9970819298022,6.86179226194549,7.04016005202667,15.0975198930147,8.54449594367478,9.73416193076748,5.37002460393694,7.68815764870372,8.27430441645564,9.16554274652847,7.71323217782577,8.33985102831127,2.31486041475121,13.0120442962704,20.2313851901456,14.5850325142333,21.0986744970001,16.9410882886806,15.7579875950365,15.0859776541163,9.8307280880826,6.25147179505242,6.80781888604149,8.09375171154165,10.9597866213787,11.6779844674751,13.5818344943645,12.7584924572925,9.75267907410617,11.937624184325,9.52187256324446,7.10408748488982,4.34964122324554,5.62862543954631,7.20248245844059,3.78791576936336,5.70616272067471,9.71882811190483,7.67362017676346,7.24338183778972,4.43708300995244,5.59503489705834,3.77585167381919,3.40489000092594,4.82459958503597,3.29325172936576,5.77087600669599,12.1968170167194,9.15851050175631,0.991256348951394,3.70230793328962,10.024547775156,9.0572302025571,6.05677068213839,4.63872106633688,4.66993892074228,7.98947629672748,2.37264530772256,4.6115707322723,5.02670417600539,2.78539060857611,3.50935356814416,7.19055526923377,6.48414149624083,4.38110801159608,12.1387456609972,11.1963542357534,7.88954149711563,12.6263823264095,10.2794818198842,4.62896411276103,8.28398636327771,7.0852871030209,8.47793130343424,6.54004968785543,2.37162101669719,6.67380422864376,7.86235980452812,7.42044970870017,7.30296436998611,8.44120059133459,8.65727896056827,7.19240343627027,2.7562988551756,5.49122826376163,1.43768206527355,2.97712758134803,0.312037673114561,1.51547326768267,2.33216637578486,1.92977408545347,16.812540305161,10.6115190591471,6.84452901056509,9.50572480341054,12.6732734075791,11.3904255060435,13.8065311713888,7.21994497073856,5.04432461139811,5.97954662051692,5.58091690301205,9.66793556822854,9.15230403889247,8.10034728056465,7.53956419696361,3.80733978673097,2.95058563811422,3.31124095565679,5.61927064957272,5.27452589664914,10.1639666133539,3.28212205365685,5.36363973007636,7.80877488593277,7.32439552291516,4.77937595905104,4.23317480756549,3.11384183867716,6.8817819284732,8.18316402151673,3.95287777946523,14.4594592389813,10.9293865610367,17.450429159391,7.32991317091092,14.0224604526655,9.2921596837974,10.9251286269742,11.1859716076958,12.2593301841334,14.4697927511579,14.7568871013085,6.97756391554197,7.99774204850512,11.7644134866958,6.95280867458795,9.48767477174989,6.18813259489121,34.3844001811326,14.5849486165361,17.5927809944546,17.1469628025274,19.3300854670078,22.831208653065,25.834196234533,28.0107753185431,7.04015124191131,14.8282449604674,5.73373834942901,8.57408515295696,4.52100394748536,5.60910201831849,5.96861720015682,4.26766339337159,2.91480836629851,4.26478194624172,7.86006051670122,7.42992724667601,7.22258656741876,9.60679130723924,6.28793447516716,6.17701067657611,9.5187920796559,7.69732987780119,6.21899882119907,3.81868247206045,4.74503990371703,7.1161813494397,12.2046035128635,12.3362094648537,8.7345025498471,8.90104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| |||
|short_description=p1@Tmem107 | |||
}} |
Revision as of 09:23, 6 August 2015
Short description: | p1@Tmem107 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem107_5end |
Coexpression cluster: | MCL_coexpression_mm9:346 |
Association with transcript: | 0bp_to_ENSMUST00000075980, ENSMUST00000094081, ENSMUST00000123821, ENSMUST00000152142, NM_025838, NM_028336, uc007jpc.2, uc007jpd.2_5end |
EntrezGene: | 66910 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.97e-09 | 49 |
neurectoderm | 2.98e-07 | 64 |
neural plate | 2.98e-07 | 64 |
presumptive neural plate | 2.98e-07 | 64 |
regional part of forebrain | 8.58e-07 | 39 |
forebrain | 8.58e-07 | 39 |
future forebrain | 8.58e-07 | 39 |