FFCP PHASE1:Hg19::chr17:46806035..46806059,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5112 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q4KR72,Q92826 | ||
|association_with_transcript=51bp_to_NM_006361,uc002ioa.2_5end | |association_with_transcript=51bp_to_NM_006361,uc002ioa.2_5end | ||
|cluster_id=chr17:46806035..46806059,- | |cluster_id=chr17:46806035..46806059,- |
Latest revision as of 17:33, 15 September 2015
Short description: | p2@HOXB13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB13_5end |
Coexpression cluster: | C2415_prostate_neuroepithelioma_neuroectodermal_rhabdomyosarcoma_Melanocyte_carcinoid_argyrophil |
Association with transcript: | 51bp_to_NM_006361, uc002ioa.2_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q4KR72Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HOXB13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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light melanocyte | 9.33e-17 | 3 |
melanocyte | 3.64e-13 | 10 |
melanoblast | 3.64e-13 | 10 |
pigment cell | 2.56e-09 | 14 |
epithelial cell of prostate | 1.43e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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larynx | 2.14e-25 | 9 |
upper respiratory tract | 1.37e-11 | 19 |
hindgut | 3.17e-09 | 19 |
subdivision of digestive tract | 2.42e-08 | 118 |
prostate gland | 1.02e-07 | 11 |
male accessory sex gland | 1.02e-07 | 11 |
embryonic cloacal epithelium | 1.02e-07 | 11 |
epithelium of hindgut | 1.02e-07 | 11 |
urogenital sinus epithelium | 1.02e-07 | 11 |
prostate bud | 1.02e-07 | 11 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 1.79e-18 | 10 |
cell type cancer | 2.36e-13 | 143 |
germ cell and embryonal cancer | 4.69e-08 | 22 |
germ cell cancer | 4.69e-08 | 22 |
cancer | 5.67e-07 | 235 |
Showing 1 to 5 of 5 entries