FFCP PHASE1:Hg19::chrX:48328131..48328192,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-186bp_to_ENST00000488083_5end | |association_with_transcript=-186bp_to_ENST00000488083_5end | ||
|cluster_id=chrX:48328131..48328192,- | |||
|description=CAGE_peak_11_at_SLC38A5_5end | |description=CAGE_peak_11_at_SLC38A5_5end | ||
|id=chrX:48328131..48328192,- | |id=chrX:48328131..48328192,- | ||
|ontology_enrichment_celltype=CL:0000542!3.35e-09!53;CL:0000051!3.35e-09!53;CL:0000838!7.90e-09!52;CL:0000084!2.26e-07!25;CL:0000827!2.26e-07!25 | |ontology_enrichment_celltype=CL:0000542!3.35e-09!53;CL:0000051!3.35e-09!53;CL:0000838!7.90e-09!52;CL:0000084!2.26e-07!25;CL:0000827!2.26e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.61e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.06e-10!51;DOID:0060083!2.06e-10!51;DOID:1240!1.99e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:171;1.72e-09;10!DOID:74;1.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.64e-09,10;DOID:74,2.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.22e-08!15;UBERON:0000179!1.22e-08!15;UBERON:0000463!1.22e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!1.22e-08!15;UBERON:0000179!1.22e-08!15;UBERON:0000463!1.22e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-19;15!UBERON:0000179;1.17e-19;15!UBERON:0000463;1.17e-19;15!UBERON:0002390;1.16e-07;32!UBERON:0000013;1.61e-07;5!UBERON:0002410;1.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.49e-20,15;UBERON:0000179,8.49e-20,15;UBERON:0000463,8.49e-20,15;UBERON:0000013,1.55e-07,5;UBERON:0002410,1.55e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.840547463227464,1.31360943119913,0.550975469195755,0,0.383829398097213,0,2.75826367343678,0.90361775633475,0.369754010166788,0.619737604642413,0,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,1.11410456885174,1.47302953737419,0.221533894583621,0.270803863765016,1.15282187753108,0.260118695119756,0.822189523018381,0.829050053357545,0.579606171470105,0.14828656316206,0,0,1.58633079776593,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0.973269740605272,0.0945348171640679,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0.436094052142534,2.98183171017191,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0.408308342509787,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.323292113637624,0,0,0,0.773043412653187,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,2.08525542276389,0,0.201057944823262,0.740707561268237,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0.771622122786426,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.788123040807709,0.215627574859517,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,1.53481913652154,0.784306353074702,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.623224249527161,0.991709492165869,1.34533047155574,1.02090169995667,0.708104465988849,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.53955380360819,0,1.08890984861323,0,0,0,0,1.83778720165568,8.62660935694688,4.58782324285425,5.69647187174163,5.71756261098694,2.87953591160336,1.94541993357815,5.94034580961926,6.34500141035416,0.213648142254946,1.92495971052672,0,0.371606350251437,0.721346064882224,1.4939787103167,0.318852545457645,3.39284931435788,0,0.211673582723883,0.324621940274555,0.842391534340376,0.684704037099577,0.783399478865116,5.01268954180134,0.677167111206413,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.835218521685727,0,1.35227839237992,0.66614393599564,0,0,0,0,0.557216921387392,0.284136146806413,2.14870036263921,0,0.921482106297696,0,0,0,1.81284261649436,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,8.74813840149763,0,0,0,0,0.110579259931225,0,0.219385397153973,0.32681539055697,0,0,0,0,0,0,0.957003479195758,0.274792780205587,0,1.02193298195737,0.784901281975124,0,0.451191321234361,0.588187602953219,0.503464760927528,0.75901493089674,0.476809736941136,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,0,0.234264445725339,0.364909578431332,0,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,1.37189356380129,0,0.17472666824203,0.171986032471617,0.580537987734511,0.65780385377567,0.656923656425674,0,0,0,0,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.709048640765013,0.824158583811665,1.14586024552114,0,1.1007533168552,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0.182248669974074,0.335434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0.628817220398664,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,10.2377989852811,0,0,0,0,4.68334905806882,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,3.84090226898907,0.516644938982447,0,0,0,0,11.5104934173287,0,1.41539347670307,0,3.3946505990805,2.76347396132188,0.743614585554013,3.91051442581271,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0.687034029507179,1.06172751012966,0,0.462102664601353,0,0,0.397832444232549,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0.235479278551542,0,0.840816489941367,0.913158720509496,0,0,0.0714765441766563,18.6456061844617,0.23248285073625,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0,0,0,0,0,1.57040373784389,0,0,0,1.1598144313382,0,0,0,0,0,7.69583617218004,0,0.0771741581079447,0.655678681511872,0,0,0,0.196308467114945,0.297046400327086,0,0.339854229375634,0.187967835959707,0.45120521581504,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0.23806443146374,0.581300188524055,0.372448285775147,0.112131862580613,0,0,0,0.342233301085281,0.202056159043763,0.0717222053926763,0.332660356546013,0,0.426909383510862,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.840547463227464,1.31360943119913,0.550975469195755,0,0.383829398097213,0,2.75826367343678,0.90361775633475,0.369754010166788,0.619737604642413,0,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,1.11410456885174,1.47302953737419,0.221533894583621,0.270803863765016,1.15282187753108,0.260118695119756,0.822189523018381,0.829050053357545,0.579606171470105,0.14828656316206,0,0,1.58633079776593,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0.973269740605272,0.0945348171640679,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0.436094052142534,2.98183171017191,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0.408308342509787,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.323292113637624,0,0,0,0.773043412653187,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,2.08525542276389,0,0.201057944823262,0.740707561268237,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0.771622122786426,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.788123040807709,0.215627574859517,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,1.53481913652154,0.784306353074702,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.623224249527161,0.991709492165869,1.34533047155574,1.02090169995667,0.708104465988849,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.53955380360819,0,1.08890984861323,0,0,0,0,1.83778720165568,8.62660935694688,4.58782324285425,5.69647187174163,5.71756261098694,2.87953591160336,1.94541993357815,5.94034580961926,6.34500141035416,0.213648142254946,1.92495971052672,0,0.371606350251437,0.721346064882224,1.4939787103167,0.318852545457645,3.39284931435788,0,0.211673582723883,0.324621940274555,0.842391534340376,0.684704037099577,0.783399478865116,5.01268954180134,0.677167111206413,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.835218521685727,0,1.35227839237992,0.66614393599564,0,0,0,0,0.557216921387392,0.284136146806413,2.14870036263921,0,0.921482106297696,0,0,0,1.81284261649436,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,8.74813840149763,0,0,0,0,0.110579259931225,0,0.219385397153973,0.32681539055697,0,0,0,0,0,0,0.957003479195758,0.274792780205587,0,1.02193298195737,0.784901281975124,0,0.451191321234361,0.588187602953219,0.503464760927528,0.75901493089674,0.476809736941136,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,0,0.234264445725339,0.364909578431332,0,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,1.37189356380129,0,0.17472666824203,0.171986032471617,0.580537987734511,0.65780385377567,0.656923656425674,0,0,0,0,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.709048640765013,0.824158583811665,1.14586024552114,0,1.1007533168552,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0.182248669974074,0.335434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0.628817220398664,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,10.2377989852811,0,0,0,0,4.68334905806882,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,3.84090226898907,0.516644938982447,0,0,0,0,11.5104934173287,0,1.41539347670307,0,3.3946505990805,2.76347396132188,0.743614585554013,3.91051442581271,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0.687034029507179,1.06172751012966,0,0.462102664601353,0,0,0.397832444232549,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0.235479278551542,0,0.840816489941367,0.913158720509496,0,0,0.0714765441766563,18.6456061844617,0.23248285073625,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0,0,0,0,0,1.57040373784389,0,0,0,1.1598144313382,0,0,0,0,0,7.69583617218004,0,0.0771741581079447,0.655678681511872,0,0,0,0.196308467114945,0.297046400327086,0,0.339854229375634,0.187967835959707,0.45120521581504,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0.23806443146374,0.581300188524055,0.372448285775147,0.112131862580613,0,0,0,0.342233301085281,0.202056159043763,0.0717222053926763,0.332660356546013,0,0.426909383510862,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p11@SLC38A5 | |short_description=p11@SLC38A5 | ||
}} | }} |
Latest revision as of 18:26, 15 September 2015
Short description: | p11@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC38A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -186bp_to_ENST00000488083_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 8.49e-20 | 15 |
haemolymphatic fluid | 8.49e-20 | 15 |
organism substance | 8.49e-20 | 15 |
sympathetic nervous system | 1.55e-07 | 5 |
autonomic nervous system | 1.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.64e-09 | 10 |
hematopoietic system disease | 2.61e-08 | 2 |