FFCP PHASE1:Hg19::chr5:143586373..143586390,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:143586373..143586390,+
|short_description=p11@KCTD16
|description=CAGE_peak_11_at_KCTD16_5end
|association_with_transcript=95bp_to_AB384174,HQ258238_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57528 | |EntrezGene=57528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29244 | |HGNC=29244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=95bp_to_AB384174,HQ258238_5end | |||
|cluster_id=chr5:143586373..143586390,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_11_at_KCTD16_5end | |||
|id=chr5:143586373..143586390,+ | |||
|ontology_enrichment_celltype=CL:0002579!1.31e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!4.33e-29!22;UBERON:0001893!2.34e-25!34;UBERON:0000956!3.01e-25!25;UBERON:0000203!3.01e-25!25;UBERON:0002780!4.27e-25!41;UBERON:0001890!4.27e-25!41;UBERON:0006240!4.27e-25!41;UBERON:0003080!2.21e-24!42;UBERON:0001869!2.48e-24!32;UBERON:0001950!3.79e-24!20;UBERON:0002791!2.72e-23!33;UBERON:0002020!1.72e-22!34;UBERON:0003528!1.72e-22!34;UBERON:0001049!1.42e-18!57;UBERON:0005068!1.42e-18!57;UBERON:0006241!1.42e-18!57;UBERON:0007135!1.42e-18!57;UBERON:0003056!5.53e-17!61;UBERON:0002616!6.60e-16!59;UBERON:0000349!6.69e-15!5;UBERON:0000955!3.79e-14!69;UBERON:0006238!3.79e-14!69;UBERON:0001017!8.32e-14!82;UBERON:0003075!4.33e-13!86;UBERON:0007284!4.33e-13!86;UBERON:0005743!6.68e-13!86;UBERON:0001871!6.77e-13!7;UBERON:0000200!8.81e-13!6;UBERON:0000073!2.85e-12!94;UBERON:0001016!2.85e-12!94;UBERON:0002346!3.00e-12!90;UBERON:0000025!2.52e-10!194;UBERON:0002771!7.46e-10!3;UBERON:0007023!1.67e-08!115;UBERON:0001954!2.50e-07!2;UBERON:0003022!2.50e-07!2;UBERON:0002421!2.50e-07!2;UBERON:0002600!2.50e-07!2;UBERON:0001876!4.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.55e-98;2!UBERON:0000200;4.27e-34;6!UBERON:0001871;1.78e-29;6!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0001893;4.53e-08;34!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.55e-98,2;UBERON:0000200,4.27e-34,6;UBERON:0001871,1.78e-29,6;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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| ||
|short_description=p11@KCTD16 | |||
}} | }} |
Latest revision as of 18:55, 15 September 2015
Short description: | p11@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KCTD16_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 95bp_to_AB384174, HQ258238_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.55e-98 | 2 |
gyrus | 4.27e-34 | 6 |
temporal lobe | 1.78e-29 | 6 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |