FFCP PHASE1:Hg19::chr2:232325476..232325496,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:232325476..232325496,-
|short_description=p13@NCL
|description=CAGE_peak_13_at_NCL_5end
|association_with_transcript=-40bp_to_ENST00000494618_5end
|Entrez...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4691 | |EntrezGene=4691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7667 | |HGNC=7667 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000494618_5end | |||
|cluster_id=chr2:232325476..232325496,- | |||
|coexpression_cluster_id=C483 | |||
|description=CAGE_peak_13_at_NCL_5end | |||
|id=chr2:232325476..232325496,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.13e-31!235;DOID:14566!7.21e-31!239;DOID:0050687!4.10e-18!143;DOID:305!2.93e-14!106;DOID:0050686!7.88e-14!137;DOID:2531!3.03e-13!51;DOID:0060083!3.03e-13!51;DOID:1240!2.97e-10!39;DOID:8692!1.13e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.67e-08;39!DOID:2531;9.55e-08;51!DOID:0060083;9.55e-08;51!DOID:8692;4.20e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.53e-29,235;DOID:14566,4.66e-28,239;DOID:0050687,1.73e-17,143;DOID:305,4.44e-14,106;DOID:2531,1.62e-13,51;DOID:0060083,1.62e-13,51;DOID:0050686,8.64e-12,137;DOID:1240,1.74e-10,39;DOID:8692,9.12e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p13@NCL | |||
}} | }} |
Latest revision as of 19:18, 15 September 2015
Short description: | p13@NCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NCL_5end |
Coexpression cluster: | C483_acute_diffuse_medulloblastoma_hepatocellular_small_mesothelioma_testicular |
Association with transcript: | -40bp_to_ENST00000494618_5end |
EntrezGene: | NCL |
HGNC: | 7667 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.53e-29 | 235 |
disease of cellular proliferation | 4.66e-28 | 239 |
cell type cancer | 1.73e-17 | 143 |
carcinoma | 4.44e-14 | 106 |
hematologic cancer | 1.62e-13 | 51 |
immune system cancer | 1.62e-13 | 51 |
organ system cancer | 8.64e-12 | 137 |
leukemia | 1.74e-10 | 39 |
myeloid leukemia | 9.12e-08 | 31 |