FFCP PHASE1:Hg19::chr9:131218698..131218750,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131218698..131218750,+
|short_description=p2@ODF2
|description=CAGE_peak_2_at_ODF2_5end
|association_with_transcript=0bp_to_ENST00000432065,ENST00000434106...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4957 | |EntrezGene=4957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8114 | |HGNC=8114 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4C6,Q5T4C7,Q5T4C8,Q5BJF6 | |UniProt=Q5T4C6,Q5T4C7,Q5T4C8,Q5BJF6 | ||
|association_with_transcript=0bp_to_ENST00000432065,ENST00000434106,ENST00000446274,ENST00000546203,uc004bvd.3,uc010myc.2,uc011mbf.1_5end | |||
|cluster_id=chr9:131218698..131218750,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_ODF2_5end | |||
|id=chr9:131218698..131218750,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;7.06e-34;1!CL:0000557;7.06e-34;1!CL:0000307;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!CL:0000377;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.80e-20!235;DOID:14566!3.19e-20!239;DOID:0050687!1.74e-11!143;DOID:0050686!2.78e-10!137;DOID:305!9.91e-10!106;DOID:2531!1.71e-08!51;DOID:0060083!1.71e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,25.4754301843051,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.165018999841176,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0,0.798317485731266,0,0,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.851692475380653,0,0.307240764308458,0.223676107892416,0.166849141711909,0.586164286206121,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0.694499979733169,0,0,0,0.221158519862449,0,0.219385397153973,0.435753854075961,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0.729819156862664,0,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0.343972064943233,0.290268993867255,0.511625219603299,0.903270027585302,0,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0.171594997861965,0,0,0.471388069233591,0.271808412147228,0.209205692624666,0.203996435272644,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0.321506296930038,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0,0,0.358177682162975,0,0.219284049578707,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0.255788742607303,0,0,0.109209638192014,0,0.425149840203366,0.495743057036009,0,0,0.157723490002507,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.589848616738702,0,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.511280428554946,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0.22589216407792,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0.380095503034311,0.407955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| ||
|short_description=p2@ODF2 | |||
}} | }} |
Latest revision as of 19:47, 15 September 2015
Short description: | p2@ODF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ODF2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000432065, ENST00000434106, ENST00000446274, ENST00000546203, uc004bvd.3, uc010myc.2, uc011mbf.1_5end |
EntrezGene: | ODF2 |
HGNC: | 8114 |
UniProt: | Q5T4C6Q5T4C7Q5T4C8Q5BJF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |