FFCP PHASE1:Hg19::chr4:142133987..142133994,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57484 | |EntrezGene=57484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23138 | |HGNC=23138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000420921_5end | |association_with_transcript=36bp_to_ENST00000420921_5end | ||
|cluster_id=chr4:142133987..142133994,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_15_at_RNF150_5end | |description=CAGE_peak_15_at_RNF150_5end | ||
|id=chr4:142133987..142133994,- | |id=chr4:142133987..142133994,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.39e-66;1!UBERON:0008801;4.66e-66;1!UBERON:0006601;8.51e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-32!115;UBERON:0001829!2.08e-14!2;UBERON:0001044!1.23e-10!6;UBERON:0003293!1.23e-10!6;UBERON:0003294!1.23e-10!6;UBERON:0010047!1.23e-10!6;UBERON:0000167!1.23e-10!6;UBERON:0003075!1.46e-09!86;UBERON:0007284!1.46e-09!86;UBERON:0001896!1.59e-09!3;UBERON:0005290!1.59e-09!3;UBERON:0010096!1.59e-09!3;UBERON:0002346!4.94e-09!90;UBERON:0001049!5.25e-09!57;UBERON:0005068!5.25e-09!57;UBERON:0006241!5.25e-09!57;UBERON:0007135!5.25e-09!57;UBERON:0002616!1.19e-08!59;UBERON:0004733!1.37e-08!12;UBERON:0002028!1.37e-08!12;UBERON:0007277!1.37e-08!12;UBERON:0000033!2.35e-08!123;UBERON:0001736!4.57e-08!1;UBERON:0006298!4.57e-08!1;UBERON:0001831!4.89e-08!1;UBERON:0001567!4.89e-08!1;UBERON:0008801!4.89e-08!1;UBERON:0002079!5.96e-08!1;UBERON:0004732!6.17e-08!13;UBERON:0005743!6.73e-08!86;UBERON:0000153!7.72e-08!129;UBERON:0007811!7.72e-08!129;UBERON:0002146!7.76e-08!1;UBERON:0005623!7.76e-08!1;UBERON:0003112!1.07e-07!1;UBERON:0000032!1.07e-07!1;UBERON:0005253!1.07e-07!1;UBERON:0003128!1.07e-07!1;UBERON:0002241!1.07e-07!1;UBERON:0001703!1.07e-07!1;UBERON:0004761!1.07e-07!1;UBERON:0009617!1.07e-07!1;UBERON:0002298!1.09e-07!8;UBERON:0001874!1.22e-07!1;UBERON:0002336!1.39e-07!1;UBERON:0001018!1.39e-07!1;UBERON:0002473!1.39e-07!1;UBERON:0005340!1.39e-07!1;UBERON:0002316!1.39e-07!1;UBERON:0003544!1.39e-07!1;UBERON:0001020!1.39e-07!1;UBERON:0005970!1.39e-07!1;UBERON:0002437!1.39e-07!1;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1;UBERON:0002022!3.17e-07!1;UBERON:0000955!4.73e-07!69;UBERON:0006238!4.73e-07!69;UBERON:0000073!5.77e-07!94;UBERON:0001016!5.77e-07!94;UBERON:0001017!6.16e-07!82;UBERON:0003076!6.88e-07!15;UBERON:0003057!6.88e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.72e-32!115;UBERON:0001829!2.08e-14!2;UBERON:0001044!1.23e-10!6;UBERON:0003293!1.23e-10!6;UBERON:0003294!1.23e-10!6;UBERON:0010047!1.23e-10!6;UBERON:0000167!1.23e-10!6;UBERON:0003075!1.46e-09!86;UBERON:0007284!1.46e-09!86;UBERON:0001896!1.59e-09!3;UBERON:0005290!1.59e-09!3;UBERON:0010096!1.59e-09!3;UBERON:0002346!4.94e-09!90;UBERON:0001049!5.25e-09!57;UBERON:0005068!5.25e-09!57;UBERON:0006241!5.25e-09!57;UBERON:0007135!5.25e-09!57;UBERON:0002616!1.19e-08!59;UBERON:0004733!1.37e-08!12;UBERON:0002028!1.37e-08!12;UBERON:0007277!1.37e-08!12;UBERON:0000033!2.35e-08!123;UBERON:0001736!4.57e-08!1;UBERON:0006298!4.57e-08!1;UBERON:0001831!4.89e-08!1;UBERON:0001567!4.89e-08!1;UBERON:0008801!4.89e-08!1;UBERON:0002079!5.96e-08!1;UBERON:0004732!6.17e-08!13;UBERON:0005743!6.73e-08!86;UBERON:0000153!7.72e-08!129;UBERON:0007811!7.72e-08!129;UBERON:0002146!7.76e-08!1;UBERON:0005623!7.76e-08!1;UBERON:0003112!1.07e-07!1;UBERON:0000032!1.07e-07!1;UBERON:0005253!1.07e-07!1;UBERON:0003128!1.07e-07!1;UBERON:0002241!1.07e-07!1;UBERON:0001703!1.07e-07!1;UBERON:0004761!1.07e-07!1;UBERON:0009617!1.07e-07!1;UBERON:0002298!1.09e-07!8;UBERON:0001874!1.22e-07!1;UBERON:0002336!1.39e-07!1;UBERON:0001018!1.39e-07!1;UBERON:0002473!1.39e-07!1;UBERON:0005340!1.39e-07!1;UBERON:0002316!1.39e-07!1;UBERON:0003544!1.39e-07!1;UBERON:0001020!1.39e-07!1;UBERON:0005970!1.39e-07!1;UBERON:0002437!1.39e-07!1;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1;UBERON:0002022!3.17e-07!1;UBERON:0000955!4.73e-07!69;UBERON:0006238!4.73e-07!69;UBERON:0000073!5.77e-07!94;UBERON:0001016!5.77e-07!94;UBERON:0001017!6.16e-07!82;UBERON:0003076!6.88e-07!15;UBERON:0003057!6.88e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.75e-130;2!UBERON:0001044;1.83e-98;6!UBERON:0003293;1.83e-98;6!UBERON:0003294;1.83e-98;6!UBERON:0010047;1.83e-98;6!UBERON:0003408;1.83e-98;6!UBERON:0000167;1.83e-98;6!UBERON:0001736;2.39e-66;1!UBERON:0001831;4.66e-66;1!UBERON:0001567;4.66e-66;1!UBERON:0001041;4.85e-43;14!UBERON:0004089;7.05e-34;2!UBERON:0000161;4.52e-32;19!UBERON:0000166;4.52e-32;19!UBERON:0000165;3.57e-22;28!UBERON:0002365;1.08e-19;31!UBERON:0002330;1.08e-19;31!UBERON:0004921;1.94e-16;33!UBERON:0007811;5.54e-11;52!UBERON:0000153;3.76e-10;54!UBERON:0000033;4.38e-10;50!UBERON:0001444;3.01e-09;48!UBERON:0001555;3.03e-09;54!UBERON:0002530;7.58e-09;57!UBERON:0002553;7.36e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.75e-130,2;UBERON:0001044,1.83e-98,6;UBERON:0003293,1.83e-98,6;UBERON:0003294,1.83e-98,6;UBERON:0010047,1.83e-98,6;UBERON:0000167,1.83e-98,6;UBERON:0001736,2.39e-66,1;UBERON:0006298,2.39e-66,1;UBERON:0001831,4.66e-66,1;UBERON:0001567,4.66e-66,1;UBERON:0008801,4.66e-66,1;UBERON:0003408,1.10e-59,10;UBERON:0004089,7.05e-34,2;UBERON:0000166,7.08e-28,22;UBERON:0000165,1.88e-21,29;UBERON:0000930,1.88e-21,29;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0000161,1.62e-17,36;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0002530,3.99e-11,59;UBERON:0002553,8.52e-11,61;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0001004,4.40e-09,74;UBERON:0001041,7.10e-08,87;UBERON:0003102,4.88e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@RNF150 | |short_description=p15@RNF150 | ||
}} | }} |
Latest revision as of 20:24, 15 September 2015
Short description: | p15@RNF150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RNF150_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 36bp_to_ENST00000420921_5end |
EntrezGene: | RNF150 |
HGNC: | 23138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.75e-130 | 2 |
saliva-secreting gland | 1.83e-98 | 6 |
gland of oral region | 1.83e-98 | 6 |
gland of foregut | 1.83e-98 | 6 |
oral gland | 1.83e-98 | 6 |
oral cavity | 1.83e-98 | 6 |
submandibular gland | 2.39e-66 | 1 |
submandibular gland primordium | 2.39e-66 | 1 |
parotid gland | 4.66e-66 | 1 |
cheek | 4.66e-66 | 1 |
parotid gland primordium | 4.66e-66 | 1 |
gland of gut | 1.10e-59 | 10 |
midface | 7.05e-34 | 2 |
oral opening | 7.08e-28 | 22 |
mouth | 1.88e-21 | 29 |
stomodeum | 1.88e-21 | 29 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
orifice | 1.62e-17 | 36 |
subdivision of head | 3.57e-13 | 49 |
head | 1.15e-11 | 56 |
gland | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
respiratory system | 4.40e-09 | 74 |
foregut | 7.10e-08 | 87 |
surface structure | 4.88e-07 | 99 |