FFCP PHASE1:Hg19::chr3:149193514..149193525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7104 | |EntrezGene=7104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11856 | |HGNC=11856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000463068_5end | |association_with_transcript=-45bp_to_ENST00000463068_5end | ||
|cluster_id=chr3:149193514..149193525,+ | |||
|description=CAGE_peak_5_at_TM4SF4_5end | |description=CAGE_peak_5_at_TM4SF4_5end | ||
|id=chr3:149193514..149193525,+ | |id=chr3:149193514..149193525,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.61e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.77e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!5.68e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.94e-37;2!DOID:2513;3.56e-19;1!DOID:3493;1.57e-10;2!DOID:3451;2.85e-10;2!DOID:4159;2.85e-10;2!DOID:0060122;2.85e-10;2!DOID:299;3.49e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.94e-37,2;DOID:2513,2.71e-19,1;DOID:3493,1.57e-10,2;DOID:3451,2.49e-10,2;DOID:4159,2.49e-10,2;DOID:0060122,2.49e-10,2;DOID:305,5.15e-08,106;DOID:299,3.49e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.76e-08!155;UBERON:0001555!3.76e-08!155;UBERON:0007026!3.76e-08!155;UBERON:0004119!1.21e-07!169;UBERON:0000925!1.21e-07!169;UBERON:0006595!1.21e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.52e-09;19!UBERON:0006925;3.52e-09;19!UBERON:0002114;2.88e-07;2!UBERON:0002423;4.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.62e-09,19;UBERON:0006925,3.62e-09,19;UBERON:0008836,3.62e-09,19;UBERON:0008835,5.39e-08,22;UBERON:0003894,5.39e-08,22;UBERON:0009854,1.14e-07,23;UBERON:0002114,2.47e-07,2;UBERON:0007499,4.23e-07,25;UBERON:0009497,4.23e-07,25;UBERON:0000015,4.23e-07,25;UBERON:0002423,4.23e-07,25;UBERON:0006235,4.23e-07,25;UBERON:0004161,4.23e-07,25;UBERON:0009856,7.56e-07,26 | |||
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| ||
|short_description=p5@TM4SF4 | |short_description=p5@TM4SF4 | ||
}} | }} |
Latest revision as of 21:35, 15 September 2015
Short description: | p5@TM4SF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TM4SF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000463068_5end |
EntrezGene: | TM4SF4 |
HGNC: | 11856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.77e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.62e-09 | 19 |
digestive gland | 3.62e-09 | 19 |
liver bud | 3.62e-09 | 19 |
hepatic diverticulum | 5.39e-08 | 22 |
liver primordium | 5.39e-08 | 22 |
digestive tract diverticulum | 1.14e-07 | 23 |
duodenum | 2.47e-07 | 2 |
epithelial sac | 4.23e-07 | 25 |
epithelium of foregut-midgut junction | 4.23e-07 | 25 |
anatomical boundary | 4.23e-07 | 25 |
hepatobiliary system | 4.23e-07 | 25 |
foregut-midgut junction | 4.23e-07 | 25 |
septum transversum | 4.23e-07 | 25 |
sac | 7.56e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.94e-37 | 2 |
basal cell carcinoma | 2.71e-19 | 1 |
signet ring cell adenocarcinoma | 1.57e-10 | 2 |
skin carcinoma | 2.49e-10 | 2 |
skin cancer | 2.49e-10 | 2 |
integumentary system cancer | 2.49e-10 | 2 |
carcinoma | 5.15e-08 | 106 |
adenocarcinoma | 3.49e-07 | 25 |