FFCP PHASE1:Hg19::chr12:10331623..10331639,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120939 | |EntrezGene=120939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26438 | |HGNC=26438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000298530_5end | |association_with_transcript=11bp_to_ENST00000298530_5end | ||
|cluster_id=chr12:10331623..10331639,+ | |||
|coexpression_cluster_id=C2176 | |||
|description=CAGE_peak_1_at_C12orf59_5end | |description=CAGE_peak_1_at_C12orf59_5end | ||
|id=chr12:10331623..10331639,+ | |id=chr12:10331623..10331639,+ | ||
|ontology_enrichment_celltype=CL:0000860!9.60e-23!45;CL:0002057!2.82e-19!42;CL:0002194!2.45e-13!63;CL:0000576!2.45e-13!63;CL:0000040!2.45e-13!63;CL:0000559!2.45e-13!63;CL:0002009!1.12e-12!65;CL:0000839!3.36e-11!70;CL:0000557!6.23e-11!71;CL:0000766!1.05e-09!76;CL:0000077!2.95e-08!19 | |ontology_enrichment_celltype=CL:0000860!9.60e-23!45;CL:0002057!2.82e-19!42;CL:0002194!2.45e-13!63;CL:0000576!2.45e-13!63;CL:0000040!2.45e-13!63;CL:0000559!2.45e-13!63;CL:0002009!1.12e-12!65;CL:0000839!3.36e-11!70;CL:0000557!6.23e-11!71;CL:0000766!1.05e-09!76;CL:0000077!2.95e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.44e-13;3!CL:0000860;1.66e-11;33!CL:0002057;1.66e-11;33!CL:0002563;1.84e-10;4!CL:0002195;7.04e-10;2!CL:0002571;7.04e-10;2!CL:0000473;2.01e-07;39!CL:0000234;2.01e-07;39!CL:0002251;4.16e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.67e-13,3;CL:0000860,2.57e-11,42;CL:0002057,2.57e-11,42;CL:0002563,2.02e-10,4;CL:0002195,7.05e-10,2;CL:0002571,7.05e-10,2;CL:0000473,1.34e-09,48;CL:0000234,1.34e-09,48;CL:0002194,3.30e-07,59;CL:0000576,3.30e-07,59;CL:0000040,3.30e-07,59;CL:0000559,3.30e-07,59;CL:0002251,4.07e-07,20;CL:0002009,6.67e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.56e-08;42 | |||
|ontology_enrichment_disease=DOID:305!2.64e-08!106;DOID:1749!3.76e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.66e-09!80;UBERON:0000344!2.54e-08!12;UBERON:0001474!1.03e-07!86;UBERON:0003343!3.97e-07!4;UBERON:0004785!3.97e-07!4;UBERON:0000062!4.83e-07!511;UBERON:0002405!7.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.44e-13;3!UBERON:0000920;3.44e-13;3!UBERON:0001242;1.84e-10;4!UBERON:0001262;1.84e-10;4!UBERON:0004786;1.84e-10;4!UBERON:0004808;1.84e-10;4!UBERON:0001277;1.84e-10;4!UBERON:0005631;2.95e-10;10!UBERON:0000158;2.95e-10;10!UBERON:0003350;1.05e-08;8!UBERON:0000344;4.16e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.67e-13,3;UBERON:0001242,2.02e-10,4;UBERON:0001262,2.02e-10,4;UBERON:0004786,2.02e-10,4;UBERON:0004808,2.02e-10,4;UBERON:0001277,2.02e-10,4;UBERON:0003350,1.16e-08,8;UBERON:0005631,3.24e-07,14;UBERON:0000158,3.24e-07,14;UBERON:0000344,4.46e-07,20 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,1.13362783106643,0.485168122375632,0.929716147622738,0.411167888021826,1.54853185447552,0.863077176966451,0.512321413058201,1.18241114944293,0.344745680736619,0,0,0.188242339542605,0.272906150057846,1.79778787556068,0.612167784741805,3.20929027076094,1.27867425159808,0.329851300186716,0.997318288108159,0,2.90209238628584,2.26954089876456,3.11411124497787,0.251248665256743,0,0.65156653411535,0,1.84138817993782,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8484681352232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,1.5112814734146,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39344304926383,2.08014873822732,0,0,0,8.86463560680515,0,0,0,6.39705507736582,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,1.15325234330131,0,0.160853921143607,0,0,0,0,0,0.116210378459959,2.29632954224082,0,0,0.34444334449382,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0.179515288819544,0.434589487688032,3.82801391678303,3.84709892287822,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,3.53382678584852,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0.979923974143776,0,0,0,1.16107597546902,1.0232504392066,0.821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,1.79828648623917,0,0.114536596165916,0,0,0,0,0.135904206073614,0.104602846312333,48.0411605067076,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,90.866840631414,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,91.4934261743691,64.1519612891027,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0.963099152036517,0.428883182749851,0,11.1085903501013,0.231522474323834,0,0,1.85280868296583,2.19284049578707,0,0.192914038270915,0,0.256241518587947,1.72715170865599,3.64631947412859,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,20.2122015053112,0,0,0,0,0,0,0,0,9.12773782059538,0.353909170043221,0.366857197043358,2.19498765685643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,52.6911667029923,0,1.94334832096759,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,1.13362783106643,0.485168122375632,0.929716147622738,0.411167888021826,1.54853185447552,0.863077176966451,0.512321413058201,1.18241114944293,0.344745680736619,0,0,0.188242339542605,0.272906150057846,1.79778787556068,0.612167784741805,3.20929027076094,1.27867425159808,0.329851300186716,0.997318288108159,0,2.90209238628584,2.26954089876456,3.11411124497787,0.251248665256743,0,0.65156653411535,0,1.84138817993782,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8484681352232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,1.5112814734146,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39344304926383,2.08014873822732,0,0,0,8.86463560680515,0,0,0,6.39705507736582,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,1.15325234330131,0,0.160853921143607,0,0,0,0,0,0.116210378459959,2.29632954224082,0,0,0.34444334449382,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0.179515288819544,0.434589487688032,3.82801391678303,3.84709892287822,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,3.53382678584852,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0.979923974143776,0,0,0,1.16107597546902,1.0232504392066,0.821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,1.79828648623917,0,0.114536596165916,0,0,0,0,0.135904206073614,0.104602846312333,48.0411605067076,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,90.866840631414,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,91.4934261743691,64.1519612891027,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0.963099152036517,0.428883182749851,0,11.1085903501013,0.231522474323834,0,0,1.85280868296583,2.19284049578707,0,0.192914038270915,0,0.256241518587947,1.72715170865599,3.64631947412859,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,20.2122015053112,0,0,0,0,0,0,0,0,9.12773782059538,0.353909170043221,0.366857197043358,2.19498765685643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,52.6911667029923,0,1.94334832096759,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@C12orf59 | |short_description=p1@C12orf59 | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p1@C12orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf59_5end |
Coexpression cluster: | C2176_kidney_hepatoblastoma_rectal_glioblastoma_normal_mesothelioma_oral |
Association with transcript: | 11bp_to_ENST00000298530_5end |
EntrezGene: | C12orf59 |
HGNC: | 26438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.67e-13 | 3 |
classical monocyte | 2.57e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-11 | 42 |
intestinal epithelial cell | 2.02e-10 | 4 |
hepatic stem cell | 7.05e-10 | 2 |
hepatic mesenchymal stem cell | 7.05e-10 | 2 |
defensive cell | 1.34e-09 | 48 |
phagocyte | 1.34e-09 | 48 |
monopoietic cell | 3.30e-07 | 59 |
monocyte | 3.30e-07 | 59 |
monoblast | 3.30e-07 | 59 |
promonocyte | 3.30e-07 | 59 |
epithelial cell of alimentary canal | 4.07e-07 | 20 |
macrophage dendritic cell progenitor | 6.67e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.67e-13 | 3 |
intestinal mucosa | 2.02e-10 | 4 |
wall of intestine | 2.02e-10 | 4 |
gastrointestinal system mucosa | 2.02e-10 | 4 |
gastrointestinal system epithelium | 2.02e-10 | 4 |
intestinal epithelium | 2.02e-10 | 4 |
epithelium of mucosa | 1.16e-08 | 8 |
extraembryonic membrane | 3.24e-07 | 14 |
membranous layer | 3.24e-07 | 14 |
mucosa | 4.46e-07 | 20 |