FFCP PHASE1:Hg19::chr11:117698765..117698779,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:117698765..117698779,-
|short_description=p5@FXYD2
|description=CAGE_peak_5_at_FXYD2_5end
|association_with_transcript=3bp_to_ENST00000532119_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000532119_5end | |||
|cluster_id=chr11:117698765..117698779,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_5_at_FXYD2_5end | |||
|id=chr11:117698765..117698779,- | |||
|ontology_enrichment_celltype=CL:1000507!2.71e-14!12;CL:1000494!2.71e-14!12;CL:1000497!1.77e-10!18;CL:0002518!1.77e-10!18;CL:1000449!4.56e-10!16;CL:0000453!5.81e-09!5;CL:0000838!7.89e-09!52;CL:0000542!1.46e-08!53;CL:0000051!1.46e-08!53;CL:0000084!8.89e-08!25;CL:0000827!8.89e-08!25;CL:0000239!9.77e-07!3;CL:1000615!9.77e-07!3;CL:0002306!9.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.52e-19;3!CL:1000615;3.52e-19;3!CL:0002306;3.52e-19;3!CL:1000507;1.41e-15;10!CL:1000494;1.41e-15;10!CL:1000449;2.55e-10;15!CL:1000497;4.43e-09;17!CL:0002518;4.43e-09;17!CL:0002032;1.97e-07;1!CL:0000557;1.97e-07;1!CL:0002581;1.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.32e-19,3;CL:1000615,3.32e-19,3;CL:0002306,3.32e-19,3;CL:1000507,1.44e-15,10;CL:1000494,1.44e-15,10;CL:1000449,2.58e-10,15;CL:1000497,4.48e-09,17;CL:0002518,4.48e-09,17;CL:0002581,1.69e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.57e-08;1!UBERON:0008801;5.96e-08;1!UBERON:0006242;1.01e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.37e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.19e-13;2!DOID:0060060;5.39e-08;1!DOID:0060061;5.39e-08;1!DOID:8691;5.39e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.54e-13,2;DOID:0060060,5.22e-08,1;DOID:0060061,5.22e-08,1;DOID:8691,5.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.71e-14!12;UBERON:0001231!2.71e-14!12;UBERON:0004810!2.71e-14!12;UBERON:0002113!1.51e-10!27;UBERON:0003918!1.51e-10!27;UBERON:0005095!1.51e-10!27;UBERON:0007687!1.51e-10!27;UBERON:0004211!4.56e-10!16;UBERON:0001285!4.56e-10!16;UBERON:0007684!4.56e-10!16;UBERON:0003220!4.56e-10!16;UBERON:0004208!4.56e-10!16;UBERON:0000489!1.93e-09!32;UBERON:0006555!2.51e-09!17;UBERON:0005103!2.51e-09!17;UBERON:0000083!2.51e-09!17;UBERON:0009201!2.51e-09!17;UBERON:0004819!2.51e-09!17;UBERON:0006553!2.51e-09!17;UBERON:0003074!2.51e-09!17;UBERON:0003060!2.51e-09!17;UBERON:0000058!8.43e-09!26;UBERON:0000080!1.14e-08!18;UBERON:0002120!1.14e-08!18;UBERON:0004875!1.14e-08!18;UBERON:0005721!1.14e-08!18;UBERON:0005754!1.14e-08!18;UBERON:0007297!1.14e-08!18;UBERON:0006554!1.16e-08!44;UBERON:0001008!2.30e-08!45;UBERON:0004876!1.47e-07!20;UBERON:0003887!4.36e-07!21;UBERON:0006853!9.77e-07!3;UBERON:0007685!9.77e-07!3;UBERON:0004134!9.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.52e-19;3!UBERON:0007685;3.52e-19;3!UBERON:0004134;3.52e-19;3!UBERON:0004211;1.41e-15;10!UBERON:0009773;1.41e-15;10!UBERON:0001231;1.41e-15;10!UBERON:0004810;1.41e-15;10!UBERON:0001829;2.52e-14;2!UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0001044;1.44e-10;6!UBERON:0003293;1.44e-10;6!UBERON:0003294;1.44e-10;6!UBERON:0010047;1.44e-10;6!UBERON:0003408;1.44e-10;6!UBERON:0000167;1.44e-10;6!UBERON:0006555;2.55e-10;15!UBERON:0004819;2.55e-10;15!UBERON:0001285;2.55e-10;15!UBERON:0007684;2.55e-10;15!UBERON:0000489;6.59e-10;29!UBERON:0006554;1.51e-09;30!UBERON:0001008;1.51e-09;30!UBERON:0001736;4.57e-08;1!UBERON:0001831;5.96e-08;1!UBERON:0001567;5.96e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.32e-19,3;UBERON:0007685,3.32e-19,3;UBERON:0004134,3.32e-19,3;UBERON:0004810,1.44e-15,10;UBERON:0001829,2.53e-14,2;UBERON:0002113,3.80e-11,26;UBERON:0003918,3.80e-11,26;UBERON:0011143,3.80e-11,26;UBERON:0005095,3.80e-11,26;UBERON:0007687,3.80e-11,26;UBERON:0003408,1.25e-10,10;UBERON:0001044,1.44e-10,6;UBERON:0003293,1.44e-10,6;UBERON:0003294,1.44e-10,6;UBERON:0010047,1.44e-10,6;UBERON:0000167,1.44e-10,6;UBERON:0004211,2.58e-10,15;UBERON:0009773,2.58e-10,15;UBERON:0001231,2.58e-10,15;UBERON:0001285,2.58e-10,15;UBERON:0007684,2.58e-10,15;UBERON:0004208,2.58e-10,15;UBERON:0006555,1.17e-09,16;UBERON:0004819,1.17e-09,16;UBERON:0000489,3.29e-09,31;UBERON:0001736,4.57e-08,1;UBERON:0006298,4.57e-08,1;UBERON:0005172,4.91e-08,54;UBERON:0005173,4.91e-08,54;UBERON:0001831,5.96e-08,1;UBERON:0001567,5.96e-08,1;UBERON:0008801,5.96e-08,1;UBERON:0002417,4.33e-07,60;UBERON:0000916,4.33e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,1.62961133316795,1.89379122293893,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0,0,0.651083453856419,0.950452044448374,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.462092022626489,2.35304930753057,4.38417673959782,0.844413031143006,0,0,0,0,0.541892875087706,0.501689773854853,1.27438136522519,1.66215201785745,2.23874754722178,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,1.28055318027145,0.478278818186467,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.369254416383208,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,5.69694774225673,1.14262965711403,0,0,0,0,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,2.41981432097328,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,78.8662062837944,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,12.2936903386749,4.72091293214983,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,5.38107189034688,0,0,0,0.974301544196942,0.398594520940089,0.490696182767533,0,0,0,12.5992059388606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,3.12605604493237,0,0.163771917510097,0.443568258651136,0,0,0,0,0,11.5134131040008,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,27.1043236056775,0,0,0,0,0.62041277132864,0,0.111855431797792,0.098150233615243,0.731507549893617,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,31.1935912715088,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35636710655613,0.434523000071005,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,1.62961133316795,1.89379122293893,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0,0,0.651083453856419,0.950452044448374,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.462092022626489,2.35304930753057,4.38417673959782,0.844413031143006,0,0,0,0,0.541892875087706,0.501689773854853,1.27438136522519,1.66215201785745,2.23874754722178,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,1.28055318027145,0.478278818186467,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.369254416383208,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,5.69694774225673,1.14262965711403,0,0,0,0,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,2.41981432097328,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,78.8662062837944,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,12.2936903386749,4.72091293214983,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,5.38107189034688,0,0,0,0.974301544196942,0.398594520940089,0.490696182767533,0,0,0,12.5992059388606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,3.12605604493237,0,0.163771917510097,0.443568258651136,0,0,0,0,0,11.5134131040008,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,27.1043236056775,0,0,0,0,0.62041277132864,0,0.111855431797792,0.098150233615243,0.731507549893617,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,31.1935912715088,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35636710655613,0.434523000071005,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@FXYD2 | |||
}} | }} |
Latest revision as of 22:12, 15 September 2015
Short description: | p5@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FXYD2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 3bp_to_ENST00000532119_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.32e-19 | 3 |
kidney cortex tubule cell | 3.32e-19 | 3 |
epithelial cell of proximal tubule | 3.32e-19 | 3 |
kidney tubule cell | 1.44e-15 | 10 |
nephron tubule epithelial cell | 1.44e-15 | 10 |
epithelial cell of nephron | 2.58e-10 | 15 |
kidney cell | 4.48e-09 | 17 |
kidney epithelial cell | 4.48e-09 | 17 |
perirenal preadipocyte | 1.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.32e-19 | 3 |
region of nephron tubule | 3.32e-19 | 3 |
proximal tubule | 3.32e-19 | 3 |
nephron tubule epithelium | 1.44e-15 | 10 |
major salivary gland | 2.53e-14 | 2 |
kidney | 3.80e-11 | 26 |
kidney mesenchyme | 3.80e-11 | 26 |
upper urinary tract | 3.80e-11 | 26 |
kidney rudiment | 3.80e-11 | 26 |
kidney field | 3.80e-11 | 26 |
gland of gut | 1.25e-10 | 10 |
saliva-secreting gland | 1.44e-10 | 6 |
gland of oral region | 1.44e-10 | 6 |
gland of foregut | 1.44e-10 | 6 |
oral gland | 1.44e-10 | 6 |
oral cavity | 1.44e-10 | 6 |
nephron epithelium | 2.58e-10 | 15 |
renal tubule | 2.58e-10 | 15 |
nephron tubule | 2.58e-10 | 15 |
nephron | 2.58e-10 | 15 |
uriniferous tubule | 2.58e-10 | 15 |
nephrogenic mesenchyme | 2.58e-10 | 15 |
excretory tube | 1.17e-09 | 16 |
kidney epithelium | 1.17e-09 | 16 |
cavitated compound organ | 3.29e-09 | 31 |
submandibular gland | 4.57e-08 | 1 |
submandibular gland primordium | 4.57e-08 | 1 |
abdomen element | 4.91e-08 | 54 |
abdominal segment element | 4.91e-08 | 54 |
parotid gland | 5.96e-08 | 1 |
cheek | 5.96e-08 | 1 |
parotid gland primordium | 5.96e-08 | 1 |
abdominal segment of trunk | 4.33e-07 | 60 |
abdomen | 4.33e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.54e-13 | 2 |
non-Hodgkin lymphoma | 5.22e-08 | 1 |
cutaneous T cell lymphoma | 5.22e-08 | 1 |
mycosis fungoides | 5.22e-08 | 1 |