FFCP PHASE1:Hg19::chr20:35202909..35202963,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60436,100527943,55969 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15764,15870 | |||
|TSSclassifier=strong | |||
|UniProt=Q9GZN2 | |||
|association_with_transcript=0bp_to_ENST00000558028,ENST00000558530,NM_001199515,NM_001199535,uc002xfo.2_5end | |||
|cluster_id=chr20:35202909..35202963,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_TGIF2_5end,CAGE_peak_3_at_C20orf24_5end | |||
|id=chr20:35202909..35202963,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.74e-18!254;CL:0002321!1.99e-08!248;CL:0002319!3.75e-08!25;CL:0000220!7.90e-08!246;CL:0000221!3.90e-07!71;CL:0000133!7.28e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.36e-08;25!CL:0002322;5.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.27e-14,253;CL:0000133,6.81e-09,59;CL:0002319,2.97e-08,25;CL:0000221,6.45e-08,72;CL:0002321,7.07e-08,250;CL:0000223,1.64e-07,58;CL:0002322,5.66e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.05e-20!235;DOID:14566!1.25e-19!239;DOID:0050687!5.76e-16!143;DOID:305!3.15e-12!106;DOID:3095!9.81e-10!22;DOID:2994!9.81e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-15;22!DOID:2994;3.26e-15;22!DOID:171;1.17e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.97e-16,235;DOID:3095,2.95e-15,22;DOID:2994,2.95e-15,22;DOID:14566,3.92e-15,239;DOID:0050687,1.47e-14,143;DOID:305,4.15e-09,106;DOID:171,1.53e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,2.7030733015166,2.79120467188971,0.436882744260345,0.791300934685361,0.618831764800233,0,0.672325146451775,0,1.46062018077475,0,3.44738962615006,2.44800829493104,0.626909442956176,2.86235987131057,3.01123735160345,2.88748071068046,0.840547463227464,0.738905305049512,1.02324015707783,1.18009283054671,0,0.464448369948228,0,1.8072355126695,1.47901604066715,0.774672005803016,1.27952309238679,0.587200878669695,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,1.31692042387539,0.983548850569165,1.57204305099666,0.411202997999018,0.83593247695339,0.977766799900771,0,0,0.779873198196215,1.17842362989935,0,0.270803863765016,1.15282187753108,1.69077151827842,0.493313713811028,1.10540007114339,0.289803085735052,0.889719378972363,0.267540828089713,2.09071047609954,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0,0,0.602300476311091,0.127986611154418,3.74792179657038,0.236777252044017,0.821127996921047,1.00803371612366,0.267440195783507,1.01377082717959,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,1.89069634328136,2.21729397462564,2.89854792787316,0.851363990735132,1.82147644146271,1.48313777113772,0,0,0,2.14641561874808,0.571994910780128,1.85728750664782,1.19257444420023,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,1.6507082516404,1.46296476575767,0.775250277507987,0.35576626268671,0.33472061276467,0.805658634218294,0,0.488124115096339,1.47065232138347,2.43042584364528,0.714397826272638,0.44905874525234,1.0135033243499,4.5994991239765,0.949265659568129,2.74802615895611,0,0,2.61656431285521,0,0,0,0,0,1.12135520028461,0,1.72667283892012,0.622422070799533,0.269421344139376,0.490385709340376,0.454072282934794,1.15235184896,1.64025002283658,0,0,0.298897361103602,0.117434498643765,1.13311061057692,1.12360645361799,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0,0.625592599359821,0,0,0,0.45071417671979,0.340296549480063,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0.355009592516614,0.10075209822764,0.67824236924195,0.193260853163297,0,0.573609190778008,25.1265834626967,28.3613704207978,28.235128117293,14.7198698121826,23.7181599823091,9.12443397689575,0,0,0,0.928735856063958,0,1.30137480043828,1.34867752062481,2.16909926895134,1.54411561825352,0.653638332277218,1.18635309555548,0.674156540800822,1.96221465125346,0.769494313892781,0.738155454624648,4.20725321410337,0,1.47008711385542,0,0,0,2.6487785964879,2.95172252503473,0.686271241194102,0.98775256867763,0,0.402115889646523,1.38882667737794,1.62904152655162,1.03993478527958,0,3.24605133930215,1.99594780200897,0.577465791044295,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0,0,0,1.24396869324463,0.144119953416961,0.50496973370552,0.571481048629521,0.381988425558278,0,0,0.719792448923265,1.50171528921959,0,1.90622843387113,2.61576041299968,1.10007428731425,1.03417372606222,0,0.845302752556,0,0,1.02882949704857,1.41849132023278,1.0656887160644,0.57191197463259,0,3.29296134712308,0,0,1.58390374586686,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.224170287987055,0.394061520403854,0.862510299438069,0.385029108839245,3.04913549066956,2.60279707715243,4.63973287666617,1.00509759200609,0.637938751653163,0,0,0,1.59498939234882,0,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,0,0,0,1.65932251687533,0.0868836144680828,0.979005787313703,1.02943027143257,0.413536052245775,0.647142602455851,0.533637789017222,0.303127571446259,0,1.81434175997808,0.744323423456331,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.462629081407967,0.532685175939381,0.164254312027618,0,0.116210378459959,7.00984807631409,0.200506470303285,1.47329582297434,0.803701137152247,0.546273504020151,0,2.70719767744447,0.924184045252977,3.13739907670742,4.38417673959782,1.79437769117889,0,1.19065593693561,0.431831832204279,0,1.35473218771926,4.01351819083883,1.01950509218015,0,1.56712328305525,0.219259876645935,0.261435451024901,1.02580050046556,1.64007322849853,1.30151357865721,0.206082023295445,1.00726411300178,0.495056999523528,0,2.60024098414608,0,1.64340221096607,0.308097234229289,0.15350367472613,0.964856007391714,0.214840489736547,0.870100163485371,1.02271952899321,1.33548053470106,0.495854746082934,1.15314040419064,0.765676274967505,0.6069466851333,0,0,0,0.616067160352178,0,0,0.37064843820784,0.143124886741991,0,0.632758849437452,0.38126038784765,0.511795582622668,0,0,0,0.179872457583315,0,0.589062011728432,0.404364963146632,0,0,0.975267478179181,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0.405820753925408,1.239293992399,0.845086807596724,0.717056761020258,1.57198465620994,0,0,0,0,3.41525856389144,1.74967360122491,1.15466535270614,0.670302275535787,3.26672954583968,0,1.72202149068492,1.68471475667626,1.33029046061003,0.459446800413919,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,2.35012956480441,0.962479855263359,0.735120647943095,1.11481905075431,0.721346064882224,0.924843963529383,1.75368900001705,2.59453182862662,0.383010740264733,1.2700414963433,3.57084134302011,0.842391534340376,1.82587743226554,0.94007937463814,0,3.21654377823046,0.642352300414798,1.21079824314629,0.425846237690326,0,0.921722292925374,0.223676107892416,0.834245708559542,1.75849285861836,0.835218521685727,0,2.70455678475983,1.6653598399891,1.4098700508785,0.561421621224659,0.293016358543788,3.76217617423492,0.111443384277478,1.42068073403207,0.23874448473769,0.296964680832639,0,0,0,0.667852230137435,1.48323486804084,7.60051469260776,0,1.10513566212459,1.25966373927138,1.1249555075237,0.738508832766417,0.311039587661807,1.43789361835723,0.179021174675609,0,0.197286811273867,0,0,0,0,0,1.30213880542617,1.04951999995435,0,1.593108275997,0.508507300585533,0.709163045303809,0.344743373241465,1.16641845353302,1.56262495439963,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,1.30726156222788,0.975966209950223,0.615602068030377,0.227884111694002,1.1528195219403,1.79515288819544,1.08647371922008,0,0.274792780205587,0,0,0.941881538370149,0.664846727600626,0.225595660617181,0.392125068635479,0,0.569261198172555,0.953619473882272,0.421996129056054,0.163232808159148,3.95788600015034,1.08194319871046,0,0.265372693510018,0,0.296521128680622,0.86494757262552,1.04421949505455,0,0.802577647298789,0.234264445725339,0.547364367646998,2.15231080825299,0.728341138602278,0,0,1.83643656978294,0.126373159256976,1.80388103297391,0.72581733978073,0.664653872707185,0.330991955875499,0.941798755221676,1.19472429772959,2.84609546029793,1.94144542218394,0.173559738335131,0.685946781900644,1.74118413160805,0,0.171986032471617,0.580537987734511,0.511625219603299,0.739039113478883,0.0969890164884194,2.29465929397901,0.90392296312213,0.959293472527256,1.78843150532691,0,1.17330829640882,0.881747022766871,0,2.39771531498556,4.17862209746907,3.09248809647972,1.88754497648161,0.864328787928898,0.869767748958028,0,0.543616824294456,1.569042694685,1.12198039399954,0.577901179803038,0,0,1.27746588066972,0.859530882839914,1.31443677139657,0,0,0,0.399358000997982,0,0,0.403100834920358,0,3.49487848582361,10.2418136999391,10.7964774479328,9.57130322729425,3.05125192695721,1.18542664892098,0,0,12.8602518772015,12.5160887303483,7.89336642255452,0.899895566206002,0,0,0.335434687599266,0.157611414598396,2.30800187793992,1.26720403823288,0.537862017998534,0.959575986597226,0.714695326373367,0,4.5768336777855,0,0,0,0,1.14929529049075,0,1.24643300672138,0.146552233678082,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0.988058159489721,0.974340787047167,1.27668251554036,0,0,0,0,2.35581144375351,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0,1.798532254171,1.99968652739371,0.303298235083296,0.856396000634902,0,0,1.1593682288866,0.149254802886874,0.467426619694449,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0.385239660814607,0.428883182749851,3.91491437947817,0.906823702049089,0.463044948647668,2.20263034055821,0.179088841081487,3.08801447160972,3.50854479325931,0.883445729729405,0.578742114812744,0,0.256241518587947,0.345430341731199,1.21543982470953,0,0.389720617678777,0.531459361253452,0.163565394255844,1.96565909307848,1.96618327002975,0.633936370075881,0.59996218756479,0.213383459388282,0,1.70254786070051,0,1.258915569475,0.622077260032973,2.30209868346573,2.15649622793364,13.5248709996071,4.14996625129653,8.48662649770126,8.07784696386395,7.56008161979913,6.14509409770568,0.636008701306837,2.05040537003259,0,1.41070377476274,0.3062454773532,0.128458450192919,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,1.96295437002051,2.24142474360707,1.28400018965175,1.38630799380406,0,3.4517996303005,2.18807844327902,0.902523940191087,0.20170506870352,5.47059807863165,0.785720083444267,0.818859587550484,1.33070477595341,0.0675375846183947,0,0,0,1.09394961803644,0.548257766857182,0.496211178389294,3.69329613155203,1.66091155931474,0,0,0,0,0,1.49804183822513,0.514464028312255,0,0.131545547125698,0,0.889851215136553,0.313972371402056,0,1.96190514319652,0.913158720509496,0,0.47775168788705,0.357382720883282,4.58239474024907,3.13851848493938,3.82488199065675,0,0.62164849248911,0.17071847709395,0,0,0.473328002922261,0.937347452350735,0,0,0,0,1.00669888618013,1.17780280338292,0.121917924982269,0.647428837187895,0,0,1.45713297917742,0,2.18845852677505,4.99464381265788,1.35535298446752,0.439762066981716,0.452888530700021,0.154348316215889,1.09279780251979,0,0,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.322289439867886,1.09935271517422,0.535661815816973,2.11736923029415,0.722172300202514,0.730336388246517,0,0,9.93960841817063,0.135982980381829,2.18175345170189,1.5870805215462,0,0.462175628631418,0,5.80365554241363,4.15209173462043,4.43444753540029,1.63182127587171,14.1625224790747,5.329904173021,5.0141507858475,1.81868875723775,1.07185652062471,0,0,0.213233981900981,0.476128862927481,0.775066918032073,0.806971285846153,1.79410980128981,0.827413057616144,1.0105859447911,0.217716747896961,0.684466602170562,0.336760265072938,0.430333232356058,1.33064142618405,3.66314708749385,0.747091421144008,1.9307228228694,1.43720323370539,0,0.855690109280065,0.406896178315738,0,0.603821380773079,1.28227396921293 | |||
|short_description=p2@TGIF2,p3@C20orf24 | |||
}} |
Latest revision as of 23:28, 15 September 2015
Short description: | p2@TGIF2, p3@C20orf24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TGIF2_5end, CAGE_peak_3_at_C20orf24_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000558028, ENST00000558530, NM_001199515, NM_001199535, uc002xfo.2_5end |
EntrezGene: | 60436,100527943,55969 |
HGNC: | 15870&submit=Submit 15764, 15870 |
UniProt: | Q9GZN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.27e-14 | 253 |
neurectodermal cell | 6.81e-09 | 59 |
neural cell | 2.97e-08 | 25 |
ectodermal cell | 6.45e-08 | 72 |
embryonic cell | 7.07e-08 | 250 |
endodermal cell | 1.64e-07 | 58 |
embryonic stem cell | 5.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.97e-16 | 235 |
germ cell and embryonal cancer | 2.95e-15 | 22 |
germ cell cancer | 2.95e-15 | 22 |
disease of cellular proliferation | 3.92e-15 | 239 |
cell type cancer | 1.47e-14 | 143 |
carcinoma | 4.15e-09 | 106 |
neuroectodermal tumor | 1.53e-08 | 10 |