FFCP PHASE1:Hg19::chr1:225615810..225615821,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:225615810..225615821,-
|short_description=p2@LBR
|description=CAGE_peak_2_at_LBR_5end
|association_with_transcript=0bp_to_NM_002296_5end
|EntrezGene=3930
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3930 | |EntrezGene=3930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6518 | |HGNC=6518 | ||
|TSSclassifier=strong | |||
|UniProt=Q14739 | |UniProt=Q14739 | ||
|association_with_transcript=0bp_to_NM_002296_5end | |||
|cluster_id=chr1:225615810..225615821,- | |||
|description=CAGE_peak_2_at_LBR_5end | |||
|id=chr1:225615810..225615821,- | |||
|ontology_enrichment_celltype=CL:0000988!9.47e-13!182;CL:0000037!1.55e-12!172;CL:0000566!1.55e-12!172;CL:0002032!3.74e-11!165;CL:0000837!3.74e-11!165;CL:0000542!2.46e-09!53;CL:0000051!2.46e-09!53;CL:0000838!7.55e-09!52;CL:0000945!1.33e-08!24;CL:0000826!1.33e-08!24;CL:0000012!3.36e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.58e-14,177;CL:0000037,1.02e-13,168;CL:0002032,4.05e-12,161;CL:0000837,4.05e-12,161;CL:0000542,2.91e-10,53;CL:0000051,2.91e-10,53;CL:0000838,1.07e-09,52;CL:0000945,4.20e-09,24;CL:0000826,4.20e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.27e-20!51;DOID:0060083!2.27e-20!51;DOID:162!1.08e-17!235;DOID:14566!1.77e-16!239;DOID:1240!1.96e-16!39;DOID:0050686!1.07e-13!137;DOID:8692!2.88e-12!31;DOID:0060058!2.89e-07!10;DOID:0050687!4.77e-07!143;DOID:305!6.52e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.88e-14;39!DOID:2531;8.58e-14;51!DOID:0060083;8.58e-14;51!DOID:8692;7.27e-13;31!DOID:0060058;1.52e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.44e-23,51;DOID:0060083,4.44e-23,51;DOID:1240,1.04e-18,39;DOID:162,7.54e-15,235;DOID:8692,8.41e-14,31;DOID:14566,1.33e-13,239;DOID:0050686,3.33e-13,137;DOID:0060058,2.61e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@LBR | |||
}} | }} |
Latest revision as of 00:01, 16 September 2015
Short description: | p2@LBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LBR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002296_5end |
EntrezGene: | LBR |
HGNC: | 6518 |
UniProt: | Q14739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.58e-14 | 177 |
hematopoietic stem cell | 1.02e-13 | 168 |
hematopoietic oligopotent progenitor cell | 4.05e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.05e-12 | 161 |
lymphocyte | 2.91e-10 | 53 |
common lymphoid progenitor | 2.91e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.07e-09 | 52 |
lymphocyte of B lineage | 4.20e-09 | 24 |
pro-B cell | 4.20e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.44e-23 | 51 |
immune system cancer | 4.44e-23 | 51 |
leukemia | 1.04e-18 | 39 |
cancer | 7.54e-15 | 235 |
myeloid leukemia | 8.41e-14 | 31 |
disease of cellular proliferation | 1.33e-13 | 239 |
organ system cancer | 3.33e-13 | 137 |
lymphoma | 2.61e-08 | 10 |