FFCP PHASE1:Hg19::chr1:110753083..110753099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3749 | |EntrezGene=3749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6236 | |HGNC=6236 | ||
|TSSclassifier=strong | |||
|UniProt=Q03721 | |UniProt=Q03721 | ||
|association_with_transcript=-236bp_to_NM_001039574,NM_004978,NR_036437_5end | |association_with_transcript=-236bp_to_NM_001039574,NM_004978,NR_036437_5end | ||
|cluster_id=chr1:110753083..110753099,+ | |||
|description=CAGE_peak_2_at_KCNC4_5end | |description=CAGE_peak_2_at_KCNC4_5end | ||
|id=chr1:110753083..110753099,+ | |id=chr1:110753083..110753099,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000071;5.08e-07;18!CL:0000359;6.70e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.10e-09,121;CL:0000359,2.73e-07,32;CL:0000071,5.54e-07,18;CL:0002546,5.54e-07,18;CL:0002539,7.82e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;5.08e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.71e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.77e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003133!3.04e-08!48;UBERON:0000991!9.82e-08!21;UBERON:0009196!9.82e-08!21;UBERON:0009117!9.82e-08!21;UBERON:0005564!9.82e-08!21;UBERON:0004176!1.09e-07!22;UBERON:0002323!1.54e-07!46;UBERON:0001637!1.66e-07!42;UBERON:0003509!1.66e-07!42;UBERON:0004572!1.66e-07!42;UBERON:0004573!3.99e-07!33;UBERON:0004571!3.99e-07!33;UBERON:0002553!5.33e-07!70;UBERON:0004458!5.61e-07!49;UBERON:0003886!5.89e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.66e-09;33!UBERON:0004571;2.66e-09;33!UBERON:0001637;2.14e-08;42!UBERON:0003509;2.14e-08;42!UBERON:0004572;2.14e-08;42!UBERON:0007500;8.11e-08;56!UBERON:0001981;8.11e-08;56!UBERON:0004537;8.11e-08;56!UBERON:0004638;5.08e-07;18!UBERON:0001986;5.08e-07;18!UBERON:0004852;5.08e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,7.61e-12,59;UBERON:0001981,7.61e-12,59;UBERON:0004537,7.61e-12,59;UBERON:0006965,7.61e-12,59;UBERON:0001637,9.99e-12,42;UBERON:0003509,9.99e-12,42;UBERON:0004572,9.99e-12,42;UBERON:0004573,1.28e-10,33;UBERON:0004571,1.28e-10,33;UBERON:0000055,2.92e-09,68;UBERON:0004872,3.38e-09,83;UBERON:0003914,2.76e-08,117;UBERON:0002049,3.70e-07,78;UBERON:0007798,3.70e-07,78;UBERON:0004638,5.54e-07,18;UBERON:0001986,5.54e-07,18;UBERON:0004852,5.54e-07,18;UBERON:0000025,6.24e-07,192;UBERON:0004237,7.82e-07,10;UBERON:0004695,7.82e-07,10;UBERON:0002111,7.82e-07,10;UBERON:0004178,7.82e-07,10 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,1.46062018077475,1.46379839637152,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0.619264493264304,0,0,0,0.697204805222715,0.284338464974843,0.293600439334847,1.10799081706375,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,1.27562579979026,0,0.336985893439485,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,3.52342313622563,3.82273228125229,0,0.560508562981536,0.526768169550154,2.360517241366,4.71612915298998,4.72883447698871,0,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,0.886135578334485,0.541607727530031,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.889719378972363,0.267540828089713,0,0.113309342697566,1.14966148080576,1.03088233644789,0.253019692019503,0.95569624297229,0,0,0,0.127986611154418,0,0,0,2.62088766192152,3.4767225451856,3.04131248153878,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,1.5905718941022,0.486634870302636,0,0,0.087834785693126,0.982343066232845,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0.371457501329565,0.79504962946682,1.72046919021225,2.77712401286075,1.13061588384802,3.35599548967925,2.47606237746061,1.25396979922086,0.258416759169329,0,0,0,0,0,0,0,2.41109266367015,6.96041055141126,4.16662477788292,0,0.949265659568129,2.74802615895611,0,0,0.436094052142534,0,0.25326102332916,1.45650098894541,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,3.30100205692843,0.309157587715317,0.772921620136887,0,1.85653965465393,0.487185025805993,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.705264687593482,0.508681776931463,0,0,0,0.853815942907168,0.662648841607426,1.04574548582567,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,0.709840800239063,0.505754070234305,0,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,10.3341763647451,0,0,1.47008711385542,0,0,1.18157981336281,1.32438929824395,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0.468008530278475,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0.829312462163088,0.720599767084807,1.8936365013957,0.126995788584338,0.381988425558278,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,8.741741934728,1.74306691720059,10.6971100564801,1.2162378064119,0,2.10833939483032,0,0,0,0.289562613335158,0,1.43248770591916,0.448340575974109,0.985153801009636,2.15627574859517,2.18183161675572,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.434418072340414,0,0,1.24060815673732,0.431428401637234,1.49418580924822,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.896974044789907,0.511707249066704,1.60853921143608,0,0.616838775210622,0,0.328508624055237,0.519254429183621,0.813472649219715,0.120859449591622,0.601519410909855,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.308061348417659,0,0,0.211103257785751,3.4120015221269,0.170093705276516,0.647747748306418,3.08454505380579,0.270946437543853,0,1.52925763827023,1.66215201785745,0,0,0,0,0.656029291399411,0,0.824328093181778,0,0.082509499920588,0,0.650060246036521,1.6068392984416,0.290012154876366,0,0,0,0,0,0.0852266274161009,1.51354460599453,0,0.192190067365106,0.765676274967505,0.30347334256665,2.78907329578371,2.83331112147576,0,1.54016790088044,1.59691809095107,3.47973196830029,0.74129687641568,0.286249773483982,0,0,0,0,0,1.27281299170375,5.49464048139461,0,0,0.117812402345686,3.23491970517306,0,0.842516912477962,0.48763373908959,1.94970791705028,0,0,0,1.13008116620243,13.7841335886531,1.32687795048244,2.63070531152258,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,1.08890984861323,0.659006605437454,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.640944426764839,0.962479855263359,0.735120647943095,0,0.577076851905779,0.853702120180969,0.159426272728822,0.399158742865633,0,0.635020748171649,1.29848776109822,0,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0.201799707191048,1.27753871307098,0.687010689511529,0,0.671028323677248,0.166849141711909,1.17232857241224,0,0,0.270455678475983,0,0,0.748562161632879,0.586032717087576,0.121360521749513,0.557216921387392,0.5682722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| ||
|short_description=p2@KCNC4 | |short_description=p2@KCNC4 | ||
}} | }} |
Latest revision as of 00:24, 16 September 2015
Short description: | p2@KCNC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -236bp_to_NM_001039574, NM_004978, NR_036437_5end |
EntrezGene: | KCNC4 |
HGNC: | 6236 |
UniProt: | Q03721 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.10e-09 | 121 |
vascular associated smooth muscle cell | 2.73e-07 | 32 |
blood vessel endothelial cell | 5.54e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.54e-07 | 18 |
aortic smooth muscle cell | 7.82e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 7.61e-12 | 59 |
blood vessel | 7.61e-12 | 59 |
blood vasculature | 7.61e-12 | 59 |
vascular cord | 7.61e-12 | 59 |
artery | 9.99e-12 | 42 |
arterial blood vessel | 9.99e-12 | 42 |
arterial system | 9.99e-12 | 42 |
systemic artery | 1.28e-10 | 33 |
systemic arterial system | 1.28e-10 | 33 |
vessel | 2.92e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 3.38e-09 | 83 |
epithelial tube | 2.76e-08 | 117 |
vasculature | 3.70e-07 | 78 |
vascular system | 3.70e-07 | 78 |
blood vessel endothelium | 5.54e-07 | 18 |
endothelium | 5.54e-07 | 18 |
cardiovascular system endothelium | 5.54e-07 | 18 |
tube | 6.24e-07 | 192 |
blood vessel smooth muscle | 7.82e-07 | 10 |
arterial system smooth muscle | 7.82e-07 | 10 |
artery smooth muscle tissue | 7.82e-07 | 10 |
aorta smooth muscle tissue | 7.82e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.77e-07 | 14 |