FFCP PHASE1:Hg19::chr12:94853716..94853738,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:94853716..94853738,-
|short_description=p2@CCDC41
|description=CAGE_peak_2_at_CCDC41_5end
|association_with_transcript=0bp_to_ENST00000339839,ENST00000397...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y592,F8VYN8 | |UniProt=Q9Y592,F8VYN8 | ||
|association_with_transcript=0bp_to_ENST00000339839,ENST00000397809,ENST00000547575_5end | |||
|cluster_id=chr12:94853716..94853738,- | |||
|description=CAGE_peak_2_at_CCDC41_5end | |||
|id=chr12:94853716..94853738,- | |||
|ontology_enrichment_celltype=CL:0000542!7.21e-15!53;CL:0000051!7.21e-15!53;CL:0000838!1.43e-14!52;CL:0000945!1.38e-09!24;CL:0000826!1.38e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.67e-10;24!CL:0000542;1.49e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.38e-16,53;CL:0000051,8.38e-16,53;CL:0000838,1.86e-15,52;CL:0000945,1.65e-10,24;CL:0000826,1.65e-10,24;CL:0000236,3.60e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.49e-09;53!UBERON:0009117;1.77e-07;10!UBERON:0005564;1.77e-07;10 | |||
|ontology_enrichment_disease=DOID:162!6.91e-23!235;DOID:14566!7.36e-22!239;DOID:0050687!8.39e-15!143;DOID:0050686!4.41e-14!137;DOID:305!6.64e-11!106;DOID:2531!9.29e-11!51;DOID:0060083!9.29e-11!51;DOID:1240!9.19e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.94e-07;51!DOID:0060083;4.94e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.04e-18,235;DOID:14566,2.96e-17,239;DOID:0050686,1.44e-12,137;DOID:0050687,1.08e-11,143;DOID:2531,2.58e-11,51;DOID:0060083,2.58e-11,51;DOID:1240,3.39e-08,39;DOID:305,3.81e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,1.0007329835313,0.446961094427288,0,2.53299878168311,1.26343974685366,0.522371256399677,0,0,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,1.23121058076788,0.204000691244253,0.940364164434263,3.72106783270374,1.64249310087461,2.38531015230125,2.9801228241701,1.72411237844886,3.06972047123349,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,4.10576163075599,4.83375390457233,3.52320527201817,0.553995408531877,2.00544447470142,0.651032612147555,2.23915474239924,0.971680998056939,0,0,0,0,0.232429036905685,0,0.619412741790207,0.28769239232215,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.561643155732475,0.150176892841506,0,0.285012743741249,0,0.182664153764634,3.51992488922645,2.18455444504853,3.55803701545422,2.98711155796555,2.00197993518006,2.29900975981793,1.98313461835459,1.90810750907073,1.1384259382189,2.93618594685469,1.91136614062614,1.32171328579026,3.92355994087075,3.68737718685108,2.75393678159366,1.17903228824749,1.64481199199607,0.334372990781356,2.93330039970231,2.8406868344084,0,0.668462741311041,2.3568472597987,0.443067789167242,2.43723477388514,0.512365278902701,0.390178042679635,0.493313713811028,0,1.44901542867526,3.11401782640327,2.1403266247177,2.09071047609954,0.793165398882963,1.53288197440768,2.40539211837841,1.26509846009751,0.95569624297229,2.60433381542567,0.950452044448374,1.35517607169996,2.43174561193395,1.24930726552346,1.18388626022008,2.46338399076314,2.82249440514625,2.40696176205157,1.59306844271079,0,0,0.511450247374121,0.722878304769133,0,0.144846518960824,0,0,2.83604451492204,1.99556457716308,2.0202000709419,3.47094550068939,0,1.48313777113772,0,0,0.132957960518865,0.715471872916026,0,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0,0,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.803697554556718,1.34717623575702,1.0135033243499,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.506522046658319,1.85372853138506,0.860509862246441,0.709336764396714,0,0,0.24666754841716,1.8672662123986,0.538842688278752,0.490385709340376,0.756787138224657,0,0.234321431833797,0,0,0.448346041655403,2.11382097558777,1.29498355494505,1.40450806702248,0.408308342509787,0.245668634623536,0.516628905878827,1.18800285728205,0.741800787835671,0,0,1.34668891163253,1.87677779807946,0.277064115484183,0,0.30648779579902,0.45071417671979,0.567160915800105,0.717558542755448,0.427114777637135,0.211931901159562,0,0.618315175430633,0,0.558350568994769,0.506328996723799,0.68205903612839,0,0.644349290496095,0.969876340912871,0,0.503760491138201,0.508681776931463,0,0.545492241181669,0.573609190778008,4.02513230227665,4.77107165957347,2.78865462886844,2.38420426535352,1.51392510525377,2.91981887260664,0,0,0,1.39310378409594,0.721879481669586,0.236613600079688,0.842923450390509,0.241011029883482,0.441175890929576,1.08939722046203,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,0.590789906681404,6.18048339180511,1.22988438543114,0.514703430895577,0.109750285408626,0,0.603173834469785,0.833296006426766,0,0,0,0.927443239800615,0.821860859650752,0.288732895522148,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0.283550194484773,1.70161193135412,1.74380363108377,0.383382679165211,3.4486426652716,0.792435906119034,3.10992173311158,2.16179930125442,1.13618190083742,0.825472625798197,0.763976851116555,1.17217447210047,0,0.514137463516618,0.901029173531752,0.571652865261156,0.560655421726804,0.43596006883328,1.1734125731352,0.646358578788889,0,0,0,1.04007436911366,0.514414748524284,0,0,0.714889968290738,0,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0,0,0.958499421966331,2.29723871668228,1.42636905040718,0.723906533337896,0.61642896765115,1.07436577943937,1.45710687191585,2.56139988262505,2.15627574859517,1.02674429023799,1.01637849688985,3.90419561572865,1.54657762555539,1.00509759200609,0.637938751653163,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,0,0.356857977594324,0.157702415033935,0.468565659970853,1.20378439891088,0,1.03473071292505,1.99267679560631,0.737476674166813,0.521301686808497,0,0.343143423810856,1.6541442089831,0.431428401637234,1.28073069364133,0,0,0.907170879989041,0.992431231275107,1.07423381301644,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.710246901252508,0.328508624055237,0,0.348631135379878,1.93375119346596,1.00253235151642,0.920809889358963,0.114814448164607,0.182091168006717,0.786746489756545,0.451199612907412,1.001199382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| ||
|short_description=p2@CCDC41 | |||
}} | }} |
Latest revision as of 01:28, 16 September 2015
Short description: | p2@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC41_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339839, ENST00000397809, ENST00000547575_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | Q9Y592F8VYN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.38e-16 | 53 |
common lymphoid progenitor | 8.38e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.86e-15 | 52 |
lymphocyte of B lineage | 1.65e-10 | 24 |
pro-B cell | 1.65e-10 | 24 |
B cell | 3.60e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.04e-18 | 235 |
disease of cellular proliferation | 2.96e-17 | 239 |
organ system cancer | 1.44e-12 | 137 |
cell type cancer | 1.08e-11 | 143 |
hematologic cancer | 2.58e-11 | 51 |
immune system cancer | 2.58e-11 | 51 |
leukemia | 3.39e-08 | 39 |
carcinoma | 3.81e-08 | 106 |