FFCP PHASE1:Hg19::chr1:111682499..111682513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10390 | |EntrezGene=10390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24289 | |HGNC=24289 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_ENST00000476865_5end | |association_with_transcript=143bp_to_ENST00000476865_5end | ||
|cluster_id=chr1:111682499..111682513,+ | |||
|coexpression_cluster_id=C359 | |coexpression_cluster_id=C359 | ||
|description=CAGE_peak_5_at_CEPT1_5end | |description=CAGE_peak_5_at_CEPT1_5end | ||
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|ontology_enrichment_celltype=CL:0000945!5.18e-17!24;CL:0000826!5.18e-17!24;CL:0000542!1.18e-16!53;CL:0000051!1.18e-16!53;CL:0000838!5.43e-16!52;CL:0000738!3.02e-15!140;CL:0002087!1.14e-14!119;CL:0002031!3.34e-14!124;CL:0000037!4.08e-13!172;CL:0000566!4.08e-13!172;CL:0000988!7.81e-12!182;CL:0002032!1.08e-11!165;CL:0000837!1.08e-11!165;CL:0000236!1.23e-10!14 | |ontology_enrichment_celltype=CL:0000945!5.18e-17!24;CL:0000826!5.18e-17!24;CL:0000542!1.18e-16!53;CL:0000051!1.18e-16!53;CL:0000838!5.43e-16!52;CL:0000738!3.02e-15!140;CL:0002087!1.14e-14!119;CL:0002031!3.34e-14!124;CL:0000037!4.08e-13!172;CL:0000566!4.08e-13!172;CL:0000988!7.81e-12!182;CL:0002032!1.08e-11!165;CL:0000837!1.08e-11!165;CL:0000236!1.23e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.11e-49;24!CL:0000236;5.60e-23;13!CL:0000542;3.15e-19;53!CL:0002619;1.03e-11;3 | |ontology_enrichment_celltype_v019=CL:0000945;1.11e-49;24!CL:0000236;5.60e-23;13!CL:0000542;3.15e-19;53!CL:0002619;1.03e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.88e-50,24;CL:0000826,5.88e-50,24;CL:0000838,8.52e-32,52;CL:0000542,4.33e-31,53;CL:0000051,4.33e-31,53;CL:0000236,1.85e-26,14;CL:0002087,3.71e-18,115;CL:0002031,3.91e-17,120;CL:0000738,9.08e-16,136;CL:0000037,9.19e-14,168;CL:0002032,2.07e-13,161;CL:0000837,2.07e-13,161;CL:0000988,1.04e-12,177;CL:0002619,1.86e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.15e-19;53!UBERON:0004872;1.06e-09;7 | |ontology_enrichment_development_v019=CL:0000051;3.15e-19;53!UBERON:0004872;1.06e-09;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.83e-10;10 | |ontology_enrichment_disease_v019=DOID:0060058;3.83e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.52e-10,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.69e-21;5!UBERON:0005057;9.69e-21;5!UBERON:0002106;1.20e-13;3!UBERON:0002370;7.70e-09;2!UBERON:0005058;7.70e-09;2!UBERON:0009113;7.70e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0004177;9.69e-21;5!UBERON:0005057;9.69e-21;5!UBERON:0002106;1.20e-13;3!UBERON:0002370;7.70e-09;2!UBERON:0005058;7.70e-09;2!UBERON:0009113;7.70e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.37e-14,7;UBERON:0005057,1.37e-14,7;UBERON:0002106,1.21e-13,3;UBERON:0004854,1.21e-13,3;UBERON:0009034,1.21e-13,3;UBERON:0002095,1.21e-13,3;UBERON:0004782,1.21e-13,3;UBERON:0003281,1.21e-13,3;UBERON:0009664,1.21e-13,3;UBERON:0002296,1.21e-13,3;UBERON:0005602,1.21e-13,3;UBERON:0001179,1.21e-13,3;UBERON:0006293,1.21e-13,3 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,2.75088260692625,3.03772180964799,2.2826126580967,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,1.70427841276664,15.6386155736164,0,0.553995408531877,0.200544447470142,0.434021741431704,1.11957737119962,1.29557466407592,1.03030227053675,0.145398238779565,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0,0.852449501065388,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0.633765858935825,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0.182664153764634,3.51992488922645,2.18455444504853,1.77901850772711,3.41384178053206,0.400395987036012,2.29900975981793,1.98313461835459,0,2.27685187643779,2.34894875748376,2.29363936875137,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,2.01606743224732,0.534880391567015,0.868946423296794,0,0,0,0.361439152384566,0,0.434539556882471,0.795285947051099,3.40644409211845,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0,0,0.545492241181669,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.134831308160164,1.37355025587742,0,0,0,0,0,0,0,1.18157981336281,3.5317047953172,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.23108503043699,0.234004265139238,0.297262324577456,0.93733833986777,0.16798212819886,0.567100388969546,0,0,0,0,0.176096868026452,0.829312462163088,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.399891964728228,3.64871341923571,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,0.985153801009636,1.72502059887614,0.898401253958239,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,1.07057393278297,0.630809660135739,1.40569697991256,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0.569647187174163,0.952927101831156,0.411362273086194,0,0,0,0,0.962479855263359,0,0.929015875628594,0.28853842595289,0.924843963529383,3.18852545457645,0,0.383010740264733,0,0,0,0.684704037099577,0,0,1.01575066680962,0.321176150207399,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,3.99686361597384,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0,0,0,0.844501632511974,0.19924798825107,5.8019622261541,0.251932747854276,0.20453736500431,3.69254416383208,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0,0,0,3.06579894587209,0,0,0,0.19606253431774,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0,0,0.547364367646998,0,0.728341138602278,0,2.41981432097328,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,3.30225995056559,0,0,0.321506296930038,0.550157746388935,0.83088067605837,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,1.88645166119599,0,3.96932817449561,0.395223263795889,0.243585196761792,0,0,0.7520696820681,3.67614692116154,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0.968440444553616,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0.147855149989634,0.318593534327405,0,0,0.414706207840855,0,0,0,1.14241563650639,0,0,0.10741055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| ||
|short_description=p5@CEPT1 | |short_description=p5@CEPT1 | ||
}} | }} |
Latest revision as of 02:33, 16 September 2015
Short description: | p5@CEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CEPT1_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 143bp_to_ENST00000476865_5end |
EntrezGene: | CEPT1 |
HGNC: | 24289 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.88e-50 | 24 |
pro-B cell | 5.88e-50 | 24 |
lymphoid lineage restricted progenitor cell | 8.52e-32 | 52 |
lymphocyte | 4.33e-31 | 53 |
common lymphoid progenitor | 4.33e-31 | 53 |
B cell | 1.85e-26 | 14 |
nongranular leukocyte | 3.71e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.91e-17 | 120 |
leukocyte | 9.08e-16 | 136 |
hematopoietic stem cell | 9.19e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.07e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-13 | 161 |
hematopoietic cell | 1.04e-12 | 177 |
adult endothelial progenitor cell | 1.86e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.37e-14 | 7 |
immune organ | 1.37e-14 | 7 |
spleen | 1.21e-13 | 3 |
gastrointestinal system mesentery | 1.21e-13 | 3 |
stomach region | 1.21e-13 | 3 |
mesentery | 1.21e-13 | 3 |
gastrointestinal system serosa | 1.21e-13 | 3 |
mesentery of stomach | 1.21e-13 | 3 |
gut mesentery | 1.21e-13 | 3 |
dorsal mesentery | 1.21e-13 | 3 |
dorsal mesogastrium | 1.21e-13 | 3 |
peritoneal cavity | 1.21e-13 | 3 |
spleen primordium | 1.21e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.52e-10 | 10 |