FFCP PHASE1:Hg19::chr20:36694529..36694537,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:36694529..36694537,+
|short_description=p30@RPRD1B
|description=CAGE_peak_30_at_RPRD1B_5end
|association_with_transcript=58bp_to_uc002xhp.3_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58490 | |EntrezGene=58490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16209 | |HGNC=16209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_uc002xhp.3_5end | |||
|cluster_id=chr20:36694529..36694537,+ | |||
|coexpression_cluster_id=C717 | |||
|description=CAGE_peak_30_at_RPRD1B_5end | |||
|id=chr20:36694529..36694537,+ | |||
|ontology_enrichment_celltype=CL:0000946!3.01e-07!1;CL:0000786!3.01e-07!1;CL:0000980!3.01e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.37e-99;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!6.59e-08!1;UBERON:0001153!6.59e-08!1;UBERON:0002372!7.03e-08!1;UBERON:0001961!7.03e-08!1;UBERON:0001744!7.03e-08!1;UBERON:0001735!7.03e-08!1;UBERON:0004913!1.83e-07!1;UBERON:0003703!1.83e-07!1;UBERON:0001174!1.83e-07!1;UBERON:0004914!1.83e-07!1;UBERON:0000997!3.62e-07!1;UBERON:0005056!3.62e-07!1;UBERON:0002581!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;9.37e-99;1!UBERON:0001153;9.37e-99;1!UBERON:0009854;9.37e-99;1!UBERON:0002372;2.55e-98;1!UBERON:0001961;2.55e-98;1!UBERON:0001744;2.55e-98;1!UBERON:0001042;2.55e-98;1!UBERON:0001735;2.55e-98;1!UBERON:0006562;4.52e-50;2!UBERON:0009856;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0001155;2.19e-12;9!UBERON:0004921;1.70e-11;33!UBERON:0002465;3.02e-11;10!UBERON:0000059;2.16e-10;11!UBERON:0001007;8.21e-08;81!UBERON:0000160;7.18e-07;17!UBERON:0001555;7.93e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.37e-99,1;UBERON:0001153,9.37e-99,1;UBERON:0001045,9.37e-99,1;UBERON:0002372,2.55e-98,1;UBERON:0001961,2.55e-98,1;UBERON:0001744,2.55e-98,1;UBERON:0001735,2.55e-98,1;UBERON:0004907,4.21e-21,5;UBERON:0001155,2.19e-12,9;UBERON:0002465,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0000059,2.16e-10,11;UBERON:0006562,2.37e-10,11;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p30@RPRD1B | |||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p30@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RPRD1B_5end |
Coexpression cluster: | C717_appendix_tonsil_colon_small_plasma_submaxillary_vein |
Association with transcript: | 58bp_to_uc002xhp.3_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p30@RPRD1B |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.37e-99 | 1 |
caecum | 9.37e-99 | 1 |
midgut | 9.37e-99 | 1 |
tonsil | 2.55e-98 | 1 |
mucosa-associated lymphoid tissue | 2.55e-98 | 1 |
lymphoid tissue | 2.55e-98 | 1 |
tonsillar ring | 2.55e-98 | 1 |
lower digestive tract | 4.21e-21 | 5 |
colon | 2.19e-12 | 9 |
lymphoid system | 3.02e-11 | 10 |
Showing 1 to 10 of 15 entries