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FFCP PHASE1:Hg19::chr20:36694529..36694537,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr20:36694529..36694537,+
|DHSsupport=supported 
|short_description=p30@RPRD1B
|DPIdataset=robust
|description=CAGE_peak_30_at_RPRD1B_5end
|association_with_transcript=58bp_to_uc002xhp.3_5end
|EntrezGene=58490
|EntrezGene=58490
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding
|HGNC=16209
|HGNC=16209
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=58bp_to_uc002xhp.3_5end
|cluster_id=chr20:36694529..36694537,+
|coexpression_cluster_id=C717
|description=CAGE_peak_30_at_RPRD1B_5end
|id=chr20:36694529..36694537,+
|ontology_enrichment_celltype=CL:0000946!3.01e-07!1;CL:0000786!3.01e-07!1;CL:0000980!3.01e-07!1
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0001045;9.37e-99;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001154!6.59e-08!1;UBERON:0001153!6.59e-08!1;UBERON:0002372!7.03e-08!1;UBERON:0001961!7.03e-08!1;UBERON:0001744!7.03e-08!1;UBERON:0001735!7.03e-08!1;UBERON:0004913!1.83e-07!1;UBERON:0003703!1.83e-07!1;UBERON:0001174!1.83e-07!1;UBERON:0004914!1.83e-07!1;UBERON:0000997!3.62e-07!1;UBERON:0005056!3.62e-07!1;UBERON:0002581!4.90e-07!1
|ontology_enrichment_uberon_v019=UBERON:0001154;9.37e-99;1!UBERON:0001153;9.37e-99;1!UBERON:0009854;9.37e-99;1!UBERON:0002372;2.55e-98;1!UBERON:0001961;2.55e-98;1!UBERON:0001744;2.55e-98;1!UBERON:0001042;2.55e-98;1!UBERON:0001735;2.55e-98;1!UBERON:0006562;4.52e-50;2!UBERON:0009856;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0001155;2.19e-12;9!UBERON:0004921;1.70e-11;33!UBERON:0002465;3.02e-11;10!UBERON:0000059;2.16e-10;11!UBERON:0001007;8.21e-08;81!UBERON:0000160;7.18e-07;17!UBERON:0001555;7.93e-07;54
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.37e-99,1;UBERON:0001153,9.37e-99,1;UBERON:0001045,9.37e-99,1;UBERON:0002372,2.55e-98,1;UBERON:0001961,2.55e-98,1;UBERON:0001744,2.55e-98,1;UBERON:0001735,2.55e-98,1;UBERON:0004907,4.21e-21,5;UBERON:0001155,2.19e-12,9;UBERON:0002465,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0000059,2.16e-10,11;UBERON:0006562,2.37e-10,11;UBERON:0000160,7.18e-07,17
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|short_description=p30@RPRD1B
}}
}}

Latest revision as of 02:41, 16 September 2015

Short description:p30@RPRD1B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_30_at_RPRD1B_5end
Coexpression cluster:C717_appendix_tonsil_colon_small_plasma_submaxillary_vein
Association with transcript: 58bp_to_uc002xhp.3_5end
EntrezGene:RPRD1B
HGNC: 16209
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data