FFCP PHASE1:Hg19::chr12:96337097..96337126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144193 | |EntrezGene=144193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28577 | |HGNC=28577 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NU7,B3KVC5 | |UniProt=Q96NU7,B3KVC5 | ||
|association_with_transcript=26bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end | |association_with_transcript=26bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end | ||
|cluster_id=chr12:96337097..96337126,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AMDHD1_5end | |description=CAGE_peak_1_at_AMDHD1_5end | ||
|id=chr12:96337097..96337126,+ | |id=chr12:96337097..96337126,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.92e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.91e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.01e-09;11!UBERON:0009497;6.49e-08;13!UBERON:0003104;2.93e-07;31 | |||
|ontology_enrichment_disease=DOID:14566!5.43e-07!239 | |ontology_enrichment_disease=DOID:14566!5.43e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!9.57e-08!130;UBERON:0001041!4.50e-07!98;UBERON:0002390!5.06e-07!102;UBERON:0003061!5.06e-07!102;UBERON:0001007!9.32e-07!155;UBERON:0001555!9.32e-07!155;UBERON:0007026!9.32e-07!155 | |ontology_enrichment_uberon=UBERON:0000077!9.57e-08!130;UBERON:0001041!4.50e-07!98;UBERON:0002390!5.06e-07!102;UBERON:0003061!5.06e-07!102;UBERON:0001007!9.32e-07!155;UBERON:0001555!9.32e-07!155;UBERON:0007026!9.32e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.16e-13;19!UBERON:0006925;4.16e-13;19!UBERON:0002423;1.29e-09;25!UBERON:0002365;4.21e-09;31!UBERON:0002330;4.21e-09;31!UBERON:0000949;2.97e-08;43!UBERON:0005172;9.20e-07;52!UBERON:0005173;9.20e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.16e-13,19;UBERON:0006925,4.16e-13,19;UBERON:0008836,4.16e-13,19;UBERON:0008835,4.01e-11,22;UBERON:0003894,4.01e-11,22;UBERON:0001041,1.09e-10,87;UBERON:0000949,1.20e-10,45;UBERON:0009854,1.41e-10,23;UBERON:0005172,6.45e-10,54;UBERON:0005173,6.45e-10,54;UBERON:0007499,1.28e-09,25;UBERON:0009497,1.28e-09,25;UBERON:0000015,1.28e-09,25;UBERON:0002423,1.28e-09,25;UBERON:0006235,1.28e-09,25;UBERON:0004161,1.28e-09,25;UBERON:0002365,2.68e-09,31;UBERON:0002330,2.68e-09,31;UBERON:0009856,3.41e-09,26;UBERON:0005177,1.10e-08,101;UBERON:0002417,1.22e-08,60;UBERON:0000916,1.22e-08,60;UBERON:0002368,3.88e-08,35;UBERON:0000945,4.45e-08,8;UBERON:0010039,4.45e-08,8;UBERON:0004921,1.19e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0.284338464974843,0.587200878669695,0,0,0,2.68698569087909,0.647787332037959,1.80302897343931,0.290796477559129,0,0,0.697287110717054,0,0,0.575384784644301,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0.633765858935825,0.212604299965044,0.419317291016752,0.786300418025466,0.450530678524519,0.964353520182481,0.285012743741249,0.19891667719909,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,1.5905718941022,0,0,0,0.087834785693126,1.44076983047484,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0.323745888736263,0,0.408308342509787,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.518305275076852,1.26160425437814,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0.964044119533928,0.55146986366197,1.08939722046203,0.237270619111097,0.674156540800822,0.588664395376038,1.53898862778556,0,0,0,0,291.536580090211,69.7807323841114,166.602753684156,0.441463099414651,0,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,2.21595305478658,0.234004265139238,0.297262324577456,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0.492663237895943,0.352193736052904,0,0.144119953416961,0.37872730027914,0.190493682876507,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,1.2162378064119,5.52482800575339,0,0,0,0,0,0,0,1.90544744788996,0,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,58.630335627554,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0,0.445160178233687,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,56.6745680676211,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,1.08006287447623,0.79312517629427,0.213648142254946,0,0,0.371606350251437,0.28853842595289,0.853702120180969,0.318852545457645,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,0.976940477010201,10.301028434124,0,0.270455678475983,0,0,0,0.439524537815682,0,0.66866030566487,0,0,0.296964680832639,0,0,0,0.111308705022906,0.494411622680279,0,0.19924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,3.87733098438087,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,2.83240005149374,1.11538995422883,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,1.51472047819464,0,0.0884575645033392,0,0.889563386041866,2.10058696209055,1.8795950910982,0.067401132980677,0,0.234264445725339,0,0.391329237864179,1.21390189767046,0,0,0,0.189559738885464,0.300646838828985,0,1.99396161812156,0.330991955875499,0.627865836814451,0,0.853828638089378,0,0,0,0.174118413160805,0,0.51595809741485,0.483781656445426,0.511625219603299,0.410577285266046,0.484945082442097,0,0.677942222341597,0,0,0.0633107959558787,0.391102765469606,0.961905843018405,0.213452994739353,1.39866726707491,0.864542502924636,3.09248809647972,0.514784993585894,0.14405479798815,1.49103042678519,0.707082103850386,0.135904206073614,0.209205692624666,0.101998217636322,0.577901179803038,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,8.9812827830235,9.47782371383414,10.3127422096903,0.492137407573744,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.06074955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| ||
|short_description=p1@AMDHD1 | |short_description=p1@AMDHD1 | ||
}} | }} |
Latest revision as of 03:07, 16 September 2015
Short description: | p1@AMDHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMDHD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 26bp_to_ENST00000266736, NM_152435, uc001tel.1, uc009zth.1_5end |
EntrezGene: | AMDHD1 |
HGNC: | 28577 |
UniProt: | Q96NU7B3KVC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.91e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.16e-13 | 19 |
digestive gland | 4.16e-13 | 19 |
liver bud | 4.16e-13 | 19 |
hepatic diverticulum | 4.01e-11 | 22 |
liver primordium | 4.01e-11 | 22 |
foregut | 1.09e-10 | 87 |
endocrine system | 1.20e-10 | 45 |
digestive tract diverticulum | 1.41e-10 | 23 |
abdomen element | 6.45e-10 | 54 |
abdominal segment element | 6.45e-10 | 54 |
epithelial sac | 1.28e-09 | 25 |
epithelium of foregut-midgut junction | 1.28e-09 | 25 |
anatomical boundary | 1.28e-09 | 25 |
hepatobiliary system | 1.28e-09 | 25 |
foregut-midgut junction | 1.28e-09 | 25 |
septum transversum | 1.28e-09 | 25 |
exocrine gland | 2.68e-09 | 31 |
exocrine system | 2.68e-09 | 31 |
sac | 3.41e-09 | 26 |
trunk region element | 1.10e-08 | 101 |
abdominal segment of trunk | 1.22e-08 | 60 |
abdomen | 1.22e-08 | 60 |
endocrine gland | 3.88e-08 | 35 |
stomach | 4.45e-08 | 8 |
food storage organ | 4.45e-08 | 8 |
subdivision of digestive tract | 1.19e-07 | 118 |