FFCP PHASE1:Hg19::chr14:75894714..75894733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122953 | |EntrezGene=122953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17546 | |HGNC=17546 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000559060_5end | |association_with_transcript=-15bp_to_ENST00000559060_5end | ||
|cluster_id=chr14:75894714..75894733,+ | |||
|description=CAGE_peak_1_at_JDP2_5end | |description=CAGE_peak_1_at_JDP2_5end | ||
|id=chr14:75894714..75894733,+ | |id=chr14:75894714..75894733,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.03e-14!42;CL:0000057!4.25e-13!75;CL:0000860!8.37e-13!45;CL:0000766!1.38e-11!76;CL:0002194!1.70e-10!63;CL:0000576!1.70e-10!63;CL:0000040!1.70e-10!63;CL:0000559!1.70e-10!63;CL:0002009!9.42e-10!65;CL:0000136!9.66e-09!15;CL:0000557!3.49e-08!71;CL:0002320!6.42e-08!365;CL:0000134!1.18e-07!358;CL:0000839!1.47e-07!70;CL:0002620!9.59e-07!23 | |ontology_enrichment_celltype=CL:0002057!5.03e-14!42;CL:0000057!4.25e-13!75;CL:0000860!8.37e-13!45;CL:0000766!1.38e-11!76;CL:0002194!1.70e-10!63;CL:0000576!1.70e-10!63;CL:0000040!1.70e-10!63;CL:0000559!1.70e-10!63;CL:0002009!9.42e-10!65;CL:0000136!9.66e-09!15;CL:0000557!3.49e-08!71;CL:0002320!6.42e-08!365;CL:0000134!1.18e-07!358;CL:0000839!1.47e-07!70;CL:0002620!9.59e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.90e-10;33!CL:0002057;4.90e-10;33!CL:0000473;4.47e-09;39!CL:0000234;4.47e-09;39!CL:0000576;1.09e-08;48!CL:0000136;1.36e-07;13!CL:0000766;6.44e-07;69!CL:0002620;9.31e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.55e-14,48;CL:0000234,1.55e-14,48;CL:0000860,5.00e-14,42;CL:0002057,5.00e-14,42;CL:0000057,2.43e-13,76;CL:0000766,5.47e-12,72;CL:0002194,5.53e-11,59;CL:0000576,5.53e-11,59;CL:0000040,5.53e-11,59;CL:0000559,5.53e-11,59;CL:0002009,3.51e-10,61;CL:0000136,9.63e-09,15;CL:0000557,1.85e-08,67;CL:0002320,2.75e-08,361;CL:0000134,5.13e-08,354;CL:0000839,8.43e-08,66;CL:0002620,9.57e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.51e-10!448;UBERON:0004120!4.51e-10!448;UBERON:0006603!4.51e-10!448;UBERON:0000062!1.14e-09!511;UBERON:0000468!3.83e-09!659;UBERON:0001474!8.75e-09!86;UBERON:0004765!9.14e-09!101;UBERON:0001434!9.14e-09!101;UBERON:0002371!2.94e-08!80;UBERON:0002384!4.23e-08!375;UBERON:0002204!7.44e-08!167;UBERON:0003102!1.54e-07!95;UBERON:0000467!2.84e-07!625;UBERON:0000480!3.08e-07!626;UBERON:0002390!9.26e-07!102;UBERON:0003061!9.26e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.09e-09,82;UBERON:0001434,5.31e-09,100;UBERON:0002371,1.70e-08,76;UBERON:0002384,1.84e-08,371;UBERON:0002204,2.75e-08,167;UBERON:0004765,5.13e-08,90;UBERON:0000926,9.64e-08,315;UBERON:0004120,9.64e-08,315;UBERON:0006603,9.64e-08,315;UBERON:0002390,6.65e-07,98;UBERON:0003061,6.65e-07,98;UBERON:0003102,8.34e-07,99 | |||
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| ||
|short_description=p1@JDP2 | |short_description=p1@JDP2 | ||
}} | }} |
Latest revision as of 03:27, 16 September 2015
Short description: | p1@JDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000559060_5end |
EntrezGene: | JDP2 |
HGNC: | 17546 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.55e-14 | 48 |
phagocyte | 1.55e-14 | 48 |
classical monocyte | 5.00e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.00e-14 | 42 |
fibroblast | 2.43e-13 | 76 |
myeloid leukocyte | 5.47e-12 | 72 |
monopoietic cell | 5.53e-11 | 59 |
monocyte | 5.53e-11 | 59 |
monoblast | 5.53e-11 | 59 |
promonocyte | 5.53e-11 | 59 |
macrophage dendritic cell progenitor | 3.51e-10 | 61 |
fat cell | 9.63e-09 | 15 |
granulocyte monocyte progenitor cell | 1.85e-08 | 67 |
connective tissue cell | 2.75e-08 | 361 |
mesenchymal cell | 5.13e-08 | 354 |
myeloid lineage restricted progenitor cell | 8.43e-08 | 66 |
skin fibroblast | 9.57e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.09e-09 | 82 |
skeletal system | 5.31e-09 | 100 |
bone marrow | 1.70e-08 | 76 |
connective tissue | 1.84e-08 | 371 |
musculoskeletal system | 2.75e-08 | 167 |
skeletal element | 5.13e-08 | 90 |
mesoderm | 9.64e-08 | 315 |
mesoderm-derived structure | 9.64e-08 | 315 |
presumptive mesoderm | 9.64e-08 | 315 |
hematopoietic system | 6.65e-07 | 98 |
blood island | 6.65e-07 | 98 |
surface structure | 8.34e-07 | 99 |