FFCP PHASE1:Hg19::chr20:36974877..36974892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3929 | |EntrezGene=3929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6517 | |HGNC=6517 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCF0,P18428 | |UniProt=Q8TCF0,P18428 | ||
|association_with_transcript=0bp_to_ENST00000538599,NM_004139,uc002xic.1_5end | |association_with_transcript=0bp_to_ENST00000538599,NM_004139,uc002xic.1_5end | ||
|cluster_id=chr20:36974877..36974892,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_LBP_5end | |description=CAGE_peak_1_at_LBP_5end | ||
|id=chr20:36974877..36974892,+ | |id=chr20:36974877..36974892,+ | ||
|ontology_enrichment_celltype=CL:0000136!5.31e-19!15;CL:0000153!4.18e-11!9;CL:0000447!4.18e-11!9;CL:0000667!1.31e-09!6;CL:0000058!1.31e-09!6;CL:0000138!1.31e-09!6;CL:0000499!1.42e-08!27;CL:0002615!9.98e-07!3 | |ontology_enrichment_celltype=CL:0000136!5.31e-19!15;CL:0000153!4.18e-11!9;CL:0000447!4.18e-11!9;CL:0000667!1.31e-09!6;CL:0000058!1.31e-09!6;CL:0000138!1.31e-09!6;CL:0000499!1.42e-08!27;CL:0002615!9.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.10e-38;13!CL:0000153;2.62e-11;9!CL:0000447;2.62e-11;9!CL:0002615;1.53e-10;3!CL:0002521;3.28e-09;3!CL:0000138;5.53e-08;6!CL:0002617;2.38e-07;2!CL:0000499;8.03e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.42e-32,15;CL:0000153,2.09e-11,9;CL:0000447,2.09e-11,9;CL:0002615,1.53e-10,3;CL:0002521,2.65e-09,3;CL:0000058,4.90e-08,6;CL:0000138,4.90e-08,6;CL:0002617,2.42e-07,2;CL:0000499,7.04e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.24e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!3.24e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.98e-09;3!UBERON:0002072;2.56e-09;5!UBERON:0002190;3.28e-09;3!UBERON:0004457;1.23e-08;9!UBERON:0000042;1.23e-08;9!UBERON:0002081;5.41e-07;2!UBERON:0001013;6.03e-07;14!UBERON:0002133;7.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.87e-09,3;UBERON:0002072,2.00e-09,5;UBERON:0002190,2.65e-09,3;UBERON:0004457,6.19e-09,12;UBERON:0000042,6.19e-09,12;UBERON:0002081,5.49e-07,2;UBERON:0010227,5.49e-07,2;UBERON:0001013,5.54e-07,14;UBERON:0002133,6.97e-07,2 | |||
|phase1_expression=22.3464406502785,54.8097341160917,78.6525574855519,57.0417800612843,270.858423222936,20.9361245784089,10.1319951267324,1.89515962028049,3.65659879479774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,4.01070328508712,1.73815822752988,3.9764297352555,48.176852159961,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,4.5071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2800.01871921424,2915.06552466584,1368.26942387413,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,1.85194205030644,3.23432058798817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,2.50085260529839,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,2.66342587969691,0.657017248110473,0,1.16210378459959,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.9022597539748,0,0,0,0,0,0,0.924291702687866,0.767518373630648,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,110.643084034527,0,0,0,0,0,53.3795350404338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.59398390600856,0.276283915531148,0,0,0,0,0,0.358042349351218,0,2.07151151837561,0,0,7.75466196876175,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0.108647371922008,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,2.83064206410685,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,33.2993274642132,0,0,0,0,0,0,1.99226682220855,0,0,0,0,1.22308667769421,0,0,0,0,0,0.176512253383001,0,0,0,0,0,1.28254112402454,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,2.51354161145029,0.458320848023367,22.971936786458,0.399358000997982,0,2.00854311697685,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.878129311657,1.04909176269996,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0.511164065356265,0,2965.484448476,1346.26999134817,0,0,0,0,0.106787412567695,0,0,3.47316215268366,0,0,0,52.2257091234695,39.3583133615639,142.45069319501,82.9517755695805,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,3.77351852628863,19.5758468751238,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,3.12980115428129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35378591028663,3.63069123666336,0.781514011233092,0,0,0,0.270150338473579,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,2.30626162422861,0,0,0,0,0,0,0.313972371402056,0,0,0,0.647782773655864,0.9555033757741,0.0714765441766563,0,0,0,0,0,0.17071847709395,2.07377898544228,0,0.118332000730565,0,0,0,0,0,156.262038221516,0,0,0.647428837187895,32.6467725802866,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,15.0186878978435,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,53.6123729212445,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0.31037357147929,0,9.92895669139373,0,0,0,0.471464371102113,7.81772038780172,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=22.3464406502785,54.8097341160917,78.6525574855519,57.0417800612843,270.858423222936,20.9361245784089,10.1319951267324,1.89515962028049,3.65659879479774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,4.01070328508712,1.73815822752988,3.9764297352555,48.176852159961,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,4.5071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2800.01871921424,2915.06552466584,1368.26942387413,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,1.85194205030644,3.23432058798817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,2.50085260529839,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,2.66342587969691,0.657017248110473,0,1.16210378459959,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.9022597539748,0,0,0,0,0,0,0.924291702687866,0.767518373630648,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,110.643084034527,0,0,0,0,0,53.3795350404338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.59398390600856,0.276283915531148,0,0,0,0,0,0.358042349351218,0,2.07151151837561,0,0,7.75466196876175,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0.108647371922008,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,2.83064206410685,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,33.2993274642132,0,0,0,0,0,0,1.99226682220855,0,0,0,0,1.22308667769421,0,0,0,0,0,0.176512253383001,0,0,0,0,0,1.28254112402454,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,2.51354161145029,0.458320848023367,22.971936786458,0.399358000997982,0,2.00854311697685,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.878129311657,1.04909176269996,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0.511164065356265,0,2965.484448476,1346.26999134817,0,0,0,0,0.106787412567695,0,0,3.47316215268366,0,0,0,52.2257091234695,39.3583133615639,142.45069319501,82.9517755695805,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,3.77351852628863,19.5758468751238,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,3.12980115428129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35378591028663,3.63069123666336,0.781514011233092,0,0,0,0.270150338473579,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,2.30626162422861,0,0,0,0,0,0,0.313972371402056,0,0,0,0.647782773655864,0.9555033757741,0.0714765441766563,0,0,0,0,0,0.17071847709395,2.07377898544228,0,0.118332000730565,0,0,0,0,0,156.262038221516,0,0,0.647428837187895,32.6467725802866,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,15.0186878978435,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,53.6123729212445,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0.31037357147929,0,9.92895669139373,0,0,0,0.471464371102113,7.81772038780172,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p1@LBP | |short_description=p1@LBP | ||
}} | }} |
Latest revision as of 03:36, 16 September 2015
Short description: | p1@LBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LBP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000538599, NM_004139, uc002xic.1_5end |
EntrezGene: | LBP |
HGNC: | 6517 |
UniProt: | Q8TCF0P18428 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.42e-32 | 15 |
GAG secreting cell | 2.09e-11 | 9 |
carbohydrate secreting cell | 2.09e-11 | 9 |
adipocyte of omentum tissue | 1.53e-10 | 3 |
subcutaneous fat cell | 2.65e-09 | 3 |
chondroblast | 4.90e-08 | 6 |
chondrocyte | 4.90e-08 | 6 |
adipocyte of breast | 2.42e-07 | 2 |
stromal cell | 7.04e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.87e-09 | 3 |
hypodermis | 2.00e-09 | 5 |
subcutaneous adipose tissue | 2.65e-09 | 3 |
cavity lining | 6.19e-09 | 12 |
serous membrane | 6.19e-09 | 12 |
cardiac atrium | 5.49e-07 | 2 |
future cardiac atrium | 5.49e-07 | 2 |
adipose tissue | 5.54e-07 | 14 |
atrioventricular valve | 6.97e-07 | 2 |