FFCP PHASE1:Hg19::chr10:105428632..105428639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-200bp_to_uc010qqs.1_5end | |association_with_transcript=-200bp_to_uc010qqs.1_5end | ||
|cluster_id=chr10:105428632..105428639,- | |||
|coexpression_cluster_id=C2033 | |||
|description=CAGE_peak_26_at_SH3PXD2A_5end | |description=CAGE_peak_26_at_SH3PXD2A_5end | ||
|id=chr10:105428632..105428639,- | |id=chr10:105428632..105428639,- | ||
|ontology_enrichment_celltype=CL:0002334!9.26e-23!12;CL:0002579!1.94e-14!3;CL:0002580!2.31e-14!3;CL:0000136!9.18e-14!15;CL:0002617!4.27e-10!2;CL:0002615!4.87e-07!3 | |ontology_enrichment_celltype=CL:0002334!9.26e-23!12;CL:0002579!1.94e-14!3;CL:0002580!2.31e-14!3;CL:0000136!9.18e-14!15;CL:0002617!4.27e-10!2;CL:0002615!4.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.71e-50;12!CL:0002579;1.96e-38;3!CL:0002580;1.67e-37;3!CL:0002617;1.27e-25;2!CL:0000136;7.53e-24;13!CL:0002615;9.51e-18;3!CL:0002581;4.52e-14;1!CL:0002568;1.04e-13;1!CL:0002616;1.04e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.03e-50,12;CL:0002579,3.48e-38,3;CL:0002580,5.76e-38,3;CL:0002617,8.70e-26,2;CL:0000136,9.09e-21,15;CL:0002615,1.08e-17,3;CL:0002581,4.53e-14,1;CL:0002616,6.65e-14,1;CL:0002568,8.58e-14,1;CL:0000057,1.03e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1192!7.75e-07!3 | |ontology_enrichment_disease=DOID:1192!7.75e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:3369;1.04e-13;1!DOID:3571;1.04e-13;1!DOID:3350;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.10e-13,1;DOID:3571,1.83e-13,1;DOID:3350,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.29e-19!6;UBERON:0002358!5.29e-19!6;UBERON:0003684!5.29e-19!6;UBERON:0001178!5.29e-19!6;UBERON:0000310!3.39e-11!10;UBERON:0005406!3.13e-10!2;UBERON:0001443!3.81e-10!11;UBERON:0004457!2.49e-09!12;UBERON:0000042!2.49e-09!12;UBERON:0001013!1.13e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.86e-52;6!UBERON:0002358;2.86e-52;6!UBERON:0003684;2.86e-52;6!UBERON:0001178;2.86e-52;6!UBERON:0004457;6.55e-35;9!UBERON:0000042;6.55e-35;9!UBERON:0000310;9.67e-31;10!UBERON:0001443;5.86e-28;11!UBERON:0005406;5.58e-26;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.40e-52,6;UBERON:0002358,5.40e-52,6;UBERON:0003684,5.40e-52,6;UBERON:0001178,5.40e-52,6;UBERON:0000310,4.74e-31,10;UBERON:0001443,3.07e-28,11;UBERON:0005406,3.59e-26,2;UBERON:0004457,4.47e-26,12;UBERON:0000042,4.47e-26,12;UBERON:0009569,4.16e-12,112;UBERON:0002417,3.70e-07,60;UBERON:0000916,3.70e-07,60;UBERON:0002323,9.13e-07,46 | |||
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| ||
|short_description=p26@SH3PXD2A | |short_description=p26@SH3PXD2A | ||
}} | }} |
Latest revision as of 04:10, 16 September 2015
Short description: | p26@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SH3PXD2A_5end |
Coexpression cluster: | C2033_Preadipocyte_Adipocyte_hepatic_Mesenchymal_Ewing_skeletal_Fibroblast |
Association with transcript: | -200bp_to_uc010qqs.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.03e-50 | 12 |
omentum preadipocyte | 3.48e-38 | 3 |
preadipocyte of the breast | 5.76e-38 | 3 |
adipocyte of breast | 8.70e-26 | 2 |
fat cell | 9.09e-21 | 15 |
adipocyte of omentum tissue | 1.08e-17 | 3 |
perirenal preadipocyte | 4.53e-14 | 1 |
perirenal adipocyte cell | 6.65e-14 | 1 |
mesenchymal stem cell of Wharton's jelly | 8.58e-14 | 1 |
fibroblast | 1.03e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.40e-52 | 6 |
peritoneum | 5.40e-52 | 6 |
abdominal cavity | 5.40e-52 | 6 |
visceral peritoneum | 5.40e-52 | 6 |
breast | 4.74e-31 | 10 |
chest | 3.07e-28 | 11 |
perirenal fat | 3.59e-26 | 2 |
cavity lining | 4.47e-26 | 12 |
serous membrane | 4.47e-26 | 12 |
subdivision of trunk | 4.16e-12 | 112 |
abdominal segment of trunk | 3.70e-07 | 60 |
abdomen | 3.70e-07 | 60 |
body cavity | 9.13e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.10e-13 | 1 |
liver cancer | 1.83e-13 | 1 |
mesenchymal cell neoplasm | 2.25e-07 | 2 |