FFCP PHASE1:Hg19::chr9:135545845..135545916,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4667 | |||
|TSSclassifier=strong | |||
|UniProt=B3KNH2,Q9UKN8 | |||
|association_with_transcript=117bp_to_NM_012204,uc010mzv.2,uc010mzw.2_5end | |||
|cluster_id=chr9:135545845..135545916,+ | |||
|description=CAGE_peak_1_at_GTF3C4_5end | |||
|id=chr9:135545845..135545916,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.08e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.93e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.95e-22!143;DOID:162!5.41e-21!235;DOID:14566!6.65e-20!239;DOID:305!7.09e-19!106;DOID:3095!1.01e-07!22;DOID:2994!1.01e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.63e-08;22!DOID:2994;9.63e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.93e-22,143;DOID:162,5.75e-21,235;DOID:14566,7.05e-20,239;DOID:305,7.01e-19,106;DOID:3095,1.01e-07,22;DOID:2994,1.01e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000064!3.52e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.24e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.37e-09,223 | |||
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| |||
|short_description=p1@GTF3C4 | |||
}} |
Latest revision as of 04:35, 16 September 2015
Short description: | p1@GTF3C4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF3C4_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_NM_012204, uc010mzv.2, uc010mzw.2_5end |
EntrezGene: | GTF3C4 |
HGNC: | 4667 |
UniProt: | B3KNH2Q9UKN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.93e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 6.37e-09 | 223 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.93e-22 | 143 |
cancer | 5.75e-21 | 235 |
disease of cellular proliferation | 7.05e-20 | 239 |
carcinoma | 7.01e-19 | 106 |
germ cell and embryonal cancer | 1.01e-07 | 22 |
germ cell cancer | 1.01e-07 | 22 |