FFCP PHASE1:Hg19::chr5:149887672..149887698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=P52848,A8K8T3 | |UniProt=P52848,A8K8T3 | ||
|association_with_transcript=0bp_to_ENST00000261797,NM_001543,uc003lsk.3_5end | |association_with_transcript=0bp_to_ENST00000261797,NM_001543,uc003lsk.3_5end | ||
|cluster_id=chr5:149887672..149887698,+ | |||
|description=CAGE_peak_17_at_NDST1_5end | |description=CAGE_peak_17_at_NDST1_5end | ||
|id=chr5:149887672..149887698,+ | |id=chr5:149887672..149887698,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.19e-08;2!CL:0001016;5.19e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.02e-08,2;CL:0001016,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.73e-15;1!UBERON:0008801;5.81e-15;1!UBERON:0006298;1.61e-14;1!UBERON:0009143;2.75e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-16!115;UBERON:0001829!4.98e-10!2;UBERON:0003127!1.73e-09!2;UBERON:0001041!1.63e-08!98;UBERON:0001044!3.09e-07!6;UBERON:0003293!3.09e-07!6;UBERON:0003294!3.09e-07!6;UBERON:0010047!3.09e-07!6;UBERON:0000167!3.09e-07!6;UBERON:0001004!3.19e-07!72;UBERON:0000077!3.60e-07!130;UBERON:0004921!3.60e-07!129;UBERON:0004185!3.60e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.14e-27;2!UBERON:0001044;1.47e-20;6!UBERON:0003293;1.47e-20;6!UBERON:0003294;1.47e-20;6!UBERON:0010047;1.47e-20;6!UBERON:0003408;1.47e-20;6!UBERON:0000167;1.47e-20;6!UBERON:0001041;2.18e-15;14!UBERON:0001831;5.81e-15;1!UBERON:0002171;5.81e-15;1!UBERON:0006518;5.81e-15;1!UBERON:0008949;5.81e-15;1!UBERON:0000101;5.81e-15;1!UBERON:0001567;5.81e-15;1!UBERON:0002167;5.81e-15;1!UBERON:0001736;1.61e-14;1!UBERON:0004089;3.95e-08;2!UBERON:0000341;6.57e-08;2!UBERON:0003127;8.60e-08;2!UBERON:0000473;1.19e-07;8!UBERON:0002365;4.00e-07;31!UBERON:0002330;4.00e-07;31!UBERON:0000161;6.98e-07;19!UBERON:0000166;6.98e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.22e-27,2;UBERON:0001044,1.74e-20,6;UBERON:0003293,1.74e-20,6;UBERON:0003294,1.74e-20,6;UBERON:0010047,1.74e-20,6;UBERON:0000167,1.74e-20,6;UBERON:0001831,5.42e-15,1;UBERON:0001567,5.42e-15,1;UBERON:0008801,5.42e-15,1;UBERON:0002171,6.22e-15,1;UBERON:0006518,6.22e-15,1;UBERON:0008949,6.22e-15,1;UBERON:0000101,6.22e-15,1;UBERON:0002167,6.22e-15,1;UBERON:0001736,1.84e-14,1;UBERON:0006298,1.84e-14,1;UBERON:0003408,1.49e-12,10;UBERON:0007023,1.70e-08,114;UBERON:0004089,3.82e-08,2;UBERON:0000341,5.74e-08,2;UBERON:0003127,9.19e-08,2;UBERON:0000473,1.23e-07,8;UBERON:0002365,3.71e-07,31;UBERON:0002330,3.71e-07,31;UBERON:0001041,6.61e-07,87 | |||
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| ||
|short_description=p17@NDST1 | |short_description=p17@NDST1 | ||
}} | }} |
Latest revision as of 05:12, 16 September 2015
Short description: | p17@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261797, NM_001543, uc003lsk.3_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | P52848A8K8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.02e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.22e-27 | 2 |
saliva-secreting gland | 1.74e-20 | 6 |
gland of oral region | 1.74e-20 | 6 |
gland of foregut | 1.74e-20 | 6 |
oral gland | 1.74e-20 | 6 |
oral cavity | 1.74e-20 | 6 |
parotid gland | 5.42e-15 | 1 |
cheek | 5.42e-15 | 1 |
parotid gland primordium | 5.42e-15 | 1 |
lower lobe of right lung | 6.22e-15 | 1 |
right lung lobe | 6.22e-15 | 1 |
lower lobe of lung | 6.22e-15 | 1 |
lobe of lung | 6.22e-15 | 1 |
right lung | 6.22e-15 | 1 |
submandibular gland | 1.84e-14 | 1 |
submandibular gland primordium | 1.84e-14 | 1 |
gland of gut | 1.49e-12 | 10 |
adult organism | 1.70e-08 | 114 |
midface | 3.82e-08 | 2 |
throat | 5.74e-08 | 2 |
open tracheal system trachea | 9.19e-08 | 2 |
testis | 1.23e-07 | 8 |
exocrine gland | 3.71e-07 | 31 |
exocrine system | 3.71e-07 | 31 |
foregut | 6.61e-07 | 87 |