FFCP PHASE1:Hg19::chr1:113258063..113258082,-: Difference between revisions
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|id=chr1:113258063..113258082,-
|short_description=p5@PPM1J
|description=CAGE_peak_5_at_PPM1J_5end
|association_with_transcript=16bp_to_ENST00000309276_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=333926 | |EntrezGene=333926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20785 | |HGNC=20785 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JR12 | |UniProt=Q5JR12 | ||
|association_with_transcript=16bp_to_ENST00000309276_5end | |||
|cluster_id=chr1:113258063..113258082,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_PPM1J_5end | |||
|id=chr1:113258063..113258082,- | |||
|ontology_enrichment_celltype=CL:0000784!1.99e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.94e-35!57;UBERON:0005068!7.94e-35!57;UBERON:0006241!7.94e-35!57;UBERON:0007135!7.94e-35!57;UBERON:0002780!4.97e-33!41;UBERON:0001890!4.97e-33!41;UBERON:0006240!4.97e-33!41;UBERON:0002791!1.12e-32!33;UBERON:0002619!1.20e-32!22;UBERON:0003080!3.64e-32!42;UBERON:0002020!1.13e-31!34;UBERON:0003528!1.13e-31!34;UBERON:0001893!1.23e-31!34;UBERON:0001950!9.63e-31!20;UBERON:0001017!3.58e-30!82;UBERON:0002616!3.62e-30!59;UBERON:0001869!1.03e-29!32;UBERON:0000956!1.48e-28!25;UBERON:0000203!1.48e-28!25;UBERON:0005743!1.53e-28!86;UBERON:0000073!8.63e-28!94;UBERON:0001016!8.63e-28!94;UBERON:0000955!1.57e-27!69;UBERON:0006238!1.57e-27!69;UBERON:0003075!3.28e-26!86;UBERON:0007284!3.28e-26!86;UBERON:0002346!8.13e-25!90;UBERON:0007023!2.12e-24!115;UBERON:0003056!4.89e-21!61;UBERON:0000033!6.18e-15!123;UBERON:0004121!2.17e-14!169;UBERON:0000153!5.14e-14!129;UBERON:0007811!5.14e-14!129;UBERON:0000924!6.31e-14!173;UBERON:0006601!6.31e-14!173;UBERON:0001870!3.87e-11!2;UBERON:0000025!1.16e-10!194;UBERON:0001871!5.53e-10!7;UBERON:0000349!3.07e-09!5;UBERON:0002021!3.74e-09!5;UBERON:0000200!6.81e-08!6;UBERON:0004111!1.65e-07!241;UBERON:0000988!6.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p5@PPM1J | |||
}} | }} |
Latest revision as of 05:12, 16 September 2015
Short description: | p5@PPM1J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPM1J_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 16bp_to_ENST00000309276_5end |
EntrezGene: | PPM1J |
HGNC: | 20785 |
UniProt: | Q5JR12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |